EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000007788 (Gene tree)
Gene ID: -
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 79929 bases
Position: chrNBDQ01000035.1:17025147-17105075
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000010647	UvrD-helicase	PF00580.21	2.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000013964	TRANK1-203	8706	-	ENSVVUP00000010649	2901 (aa)	-	-
ENSVVUT00000013960	TRANK1-202	4953	-	ENSVVUP00000010647	1650 (aa)	-	-
ENSVVUT00000013944	TRANK1-201	8901	-	ENSVVUP00000010637	2966 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000007788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000007788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000007788	TRANK1	100	97.885	ENSCAFG00020001387	TRANK1	100	97.885	Canis_lupus_dingo
ENSVVUG00000007788	TRANK1	96	83.271	ENSTSYG00000025860	TRANK1	54	83.022	Carlito_syrichta
ENSVVUG00000007788	TRANK1	96	78.773	ENSCLAG00000003643	TRANK1	53	79.425	Chinchilla_lanigera
ENSVVUG00000007788	TRANK1	99	64.000	ENSCPBG00000013529	TRANK1	57	63.801	Chrysemys_picta_bellii
ENSVVUG00000007788	TRANK1	97	85.553	ENSCANG00000039915	TRANK1	54	86.116	Colobus_angolensis_palliatus
ENSVVUG00000007788	TRANK1	99	81.326	ENSDNOG00000003573	TRANK1	56	81.387	Dasypus_novemcinctus
ENSVVUG00000007788	TRANK1	100	85.094	ENSEASG00005007374	TRANK1	100	85.335	Equus_asinus_asinus
ENSVVUG00000007788	TRANK1	99	85.228	ENSECAG00000018264	TRANK1	55	85.471	Equus_caballus
ENSVVUG00000007788	TRANK1	99	58.100	ENSFALG00000002875	TRANK1	54	58.100	Ficedula_albicollis
ENSVVUG00000007788	TRANK1	99	59.648	ENSGALG00000037629	TRANK1	85	59.322	Gallus_gallus
ENSVVUG00000007788	TRANK1	81	64.723	ENSGAGG00000009012	TRANK1	50	64.270	Gopherus_agassizii
ENSVVUG00000007788	TRANK1	99	51.055	ENSLOCG00000004808	TRANK1	55	50.875	Lepisosteus_oculatus
ENSVVUG00000007788	TRANK1	97	58.638	ENSMGAG00000011934	TRANK1	54	57.959	Meleagris_gallopavo
ENSVVUG00000007788	TRANK1	97	84.822	ENSMLUG00000003537	TRANK1	55	84.760	Myotis_lucifugus
ENSVVUG00000007788	TRANK1	96	78.084	ENSODEG00000003882	TRANK1	52	78.737	Octodon_degus
ENSVVUG00000007788	TRANK1	99	61.925	ENSPSIG00000010217	TRANK1	55	61.925	Pelodiscus_sinensis
ENSVVUG00000007788	TRANK1	99	86.062	ENSRBIG00000012281	TRANK1	54	86.304	Rhinopithecus_bieti
ENSVVUG00000007788	TRANK1	97	85.804	ENSRROG00000044487	TRANK1	54	86.366	Rhinopithecus_roxellana
ENSVVUG00000007788	TRANK1	99	92.914	ENSUAMG00000027609	-	99	92.914	Ursus_americanus
ENSVVUG00000007788	TRANK1	99	91.631	ENSUMAG00000006416	TRANK1	99	91.631	Ursus_maritimus