EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000008641 (Gene tree)
Gene ID: -
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 63688 bases
Position: chrNBDQ01000005.1:15806383-15870070
Accession: 112933830
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000012071	La	PF05383.17	2.3e-14	1	1
ENSVVUP00000012074	La	PF05383.17	2.3e-14	1	1
ENSVVUP00000012060	La	PF05383.17	2.6e-14	1	1
ENSVVUP00000012052	La	PF05383.17	2.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000015794	LARP4B-201	2205	-	ENSVVUP00000012052	734 (aa)	XP_025872885	UPI000DF68FDE
ENSVVUT00000015802	LARP4B-202	2154	-	ENSVVUP00000012060	717 (aa)	-	-
ENSVVUT00000015817	LARP4B-203	1953	-	ENSVVUP00000012071	650 (aa)	-	-
ENSVVUT00000015824	LARP4B-204	2001	-	ENSVVUP00000012074	666 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000008641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000008641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000008641	LARP4B	85	53.137	ENSVVUG00000024717	LARP4	99	53.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000008641	LARP4B	100	85.115	ENSG00000107929	LARP4B	100	91.228	Homo_sapiens
ENSVVUG00000008641	LARP4B	100	55.614	ENSAPOG00000020531	LARP4B	96	55.331	Acanthochromis_polyacanthus
ENSVVUG00000008641	LARP4B	100	96.322	ENSAMEG00000001810	LARP4B	100	96.322	Ailuropoda_melanoleuca
ENSVVUG00000008641	LARP4B	92	58.199	ENSAOCG00000007887	-	79	84.768	Amphiprion_ocellaris
ENSVVUG00000008641	LARP4B	99	55.492	ENSAPEG00000002512	LARP4B	93	57.938	Amphiprion_percula
ENSVVUG00000008641	LARP4B	100	61.521	ENSATEG00000012614	LARP4B	89	61.521	Anabas_testudineus
ENSVVUG00000008641	LARP4B	100	74.933	ENSAPLG00000003813	LARP4B	98	74.933	Anas_platyrhynchos
ENSVVUG00000008641	LARP4B	100	73.431	ENSACAG00000002858	LARP4B	100	73.431	Anolis_carolinensis
ENSVVUG00000008641	LARP4B	100	84.303	ENSANAG00000007531	-	100	84.303	Aotus_nancymaae
ENSVVUG00000008641	LARP4B	100	56.462	ENSACLG00000026356	LARP4B	100	56.211	Astatotilapia_calliptera
ENSVVUG00000008641	LARP4B	97	51.048	ENSAMXG00000003335	larp4b	93	52.367	Astyanax_mexicanus
ENSVVUG00000008641	LARP4B	100	87.772	ENSBTAG00000013899	LARP4B	100	87.772	Bos_taurus
ENSVVUG00000008641	LARP4B	100	84.574	ENSCJAG00000018434	LARP4B	100	84.574	Callithrix_jacchus
ENSVVUG00000008641	LARP4B	100	99.319	ENSCAFG00020004209	LARP4B	100	99.319	Canis_lupus_dingo
ENSVVUG00000008641	LARP4B	100	87.092	ENSCHIG00000013543	LARP4B	100	87.092	Capra_hircus
ENSVVUG00000008641	LARP4B	80	88.552	ENSTSYG00000002568	LARP4B	100	88.552	Carlito_syrichta
ENSVVUG00000008641	LARP4B	96	80.879	ENSCAPG00000009725	LARP4B	97	75.070	Cavia_aperea
ENSVVUG00000008641	LARP4B	100	88.350	ENSCPOG00000009375	LARP4B	100	85.656	Cavia_porcellus
ENSVVUG00000008641	LARP4B	100	84.574	ENSCCAG00000024869	LARP4B	100	84.574	Cebus_capucinus
ENSVVUG00000008641	LARP4B	100	85.792	ENSCATG00000019750	LARP4B	100	85.792	Cercocebus_atys
ENSVVUG00000008641	LARP4B	100	88.620	ENSCLAG00000011570	LARP4B	100	85.135	Chinchilla_lanigera
ENSVVUG00000008641	LARP4B	61	97.297	ENSCHOG00000007831	-	66	85.484	Choloepus_hoffmanni
ENSVVUG00000008641	LARP4B	100	74.366	ENSCPBG00000017063	LARP4B	100	74.366	Chrysemys_picta_bellii
ENSVVUG00000008641	LARP4B	100	83.762	ENSCANG00000038021	LARP4B	100	83.762	Colobus_angolensis_palliatus
ENSVVUG00000008641	LARP4B	100	85.830	ENSCGRG00001022930	Larp4b	100	87.544	Cricetulus_griseus_chok1gshd
ENSVVUG00000008641	LARP4B	100	85.830	ENSCGRG00000006022	Larp4b	100	87.544	Cricetulus_griseus_crigri
ENSVVUG00000008641	LARP4B	100	53.369	ENSCSEG00000007342	LARP4B	100	53.316	Cynoglossus_semilaevis
ENSVVUG00000008641	LARP4B	100	54.250	ENSCVAG00000008910	LARP4B	91	56.812	Cyprinodon_variegatus
ENSVVUG00000008641	LARP4B	89	57.311	ENSDARG00000062146	larp4b	92	52.092	Danio_rerio
ENSVVUG00000008641	LARP4B	93	86.813	ENSDNOG00000045543	-	100	86.492	Dasypus_novemcinctus
ENSVVUG00000008641	LARP4B	100	83.649	ENSDORG00000009328	Larp4b	100	85.940	Dipodomys_ordii
ENSVVUG00000008641	LARP4B	89	78.862	ENSETEG00000011249	LARP4B	91	79.655	Echinops_telfairi
ENSVVUG00000008641	LARP4B	100	90.736	ENSEASG00005019068	-	100	90.736	Equus_asinus_asinus
ENSVVUG00000008641	LARP4B	100	91.144	ENSECAG00000024040	LARP4B	100	91.144	Equus_caballus
ENSVVUG00000008641	LARP4B	100	84.939	ENSEEUG00000008391	LARP4B	98	84.939	Erinaceus_europaeus
ENSVVUG00000008641	LARP4B	87	48.628	ENSELUG00000001417	-	94	40.483	Esox_lucius
ENSVVUG00000008641	LARP4B	100	56.429	ENSELUG00000008626	LARP4B	94	57.672	Esox_lucius
ENSVVUG00000008641	LARP4B	100	93.886	ENSFCAG00000000721	-	100	93.886	Felis_catus
ENSVVUG00000008641	LARP4B	100	73.698	ENSFALG00000006961	LARP4B	100	73.698	Ficedula_albicollis
ENSVVUG00000008641	LARP4B	100	85.676	ENSFDAG00000006158	LARP4B	97	85.676	Fukomys_damarensis
ENSVVUG00000008641	LARP4B	100	51.688	ENSFHEG00000013037	LARP4B	65	89.916	Fundulus_heteroclitus
ENSVVUG00000008641	LARP4B	81	65.229	ENSGMOG00000010818	-	81	64.500	Gadus_morhua
ENSVVUG00000008641	LARP4B	100	74.601	ENSGALG00000006672	LARP4B	100	74.601	Gallus_gallus
ENSVVUG00000008641	LARP4B	100	58.409	ENSGACG00000017535	LARP4B	98	57.662	Gasterosteus_aculeatus
ENSVVUG00000008641	LARP4B	91	76.574	ENSGAGG00000008598	LARP4B	100	76.574	Gopherus_agassizii
ENSVVUG00000008641	LARP4B	100	84.980	ENSGGOG00000003572	LARP4B	100	84.980	Gorilla_gorilla
ENSVVUG00000008641	LARP4B	100	56.085	ENSHBUG00000007535	LARP4B	100	55.332	Haplochromis_burtoni
ENSVVUG00000008641	LARP4B	100	86.523	ENSHGLG00000012936	LARP4B	100	86.523	Heterocephalus_glaber_female
ENSVVUG00000008641	LARP4B	99	68.788	ENSHGLG00100017261	-	100	71.538	Heterocephalus_glaber_male
ENSVVUG00000008641	LARP4B	100	86.622	ENSHGLG00100016220	-	100	86.622	Heterocephalus_glaber_male
ENSVVUG00000008641	LARP4B	99	61.205	ENSHCOG00000011581	LARP4B	81	55.134	Hippocampus_comes
ENSVVUG00000008641	LARP4B	91	55.944	ENSIPUG00000009705	larp4b	93	51.994	Ictalurus_punctatus
ENSVVUG00000008641	LARP4B	100	84.097	ENSSTOG00000000587	LARP4B	100	84.097	Ictidomys_tridecemlineatus
ENSVVUG00000008641	LARP4B	100	84.709	ENSJJAG00000020847	Larp4b	100	84.709	Jaculus_jaculus
ENSVVUG00000008641	LARP4B	100	55.500	ENSKMAG00000021674	LARP4B	95	57.926	Kryptolebias_marmoratus
ENSVVUG00000008641	LARP4B	92	58.085	ENSLBEG00000025293	-	81	60.685	Labrus_bergylta
ENSVVUG00000008641	LARP4B	91	64.877	ENSLACG00000009492	LARP4B	100	64.877	Latimeria_chalumnae
ENSVVUG00000008641	LARP4B	100	64.351	ENSLOCG00000012290	larp4b	100	64.791	Lepisosteus_oculatus
ENSVVUG00000008641	LARP4B	100	84.375	ENSLAFG00000015334	LARP4B	100	83.311	Loxodonta_africana
ENSVVUG00000008641	LARP4B	100	85.792	ENSMFAG00000001766	LARP4B	100	83.627	Macaca_fascicularis
ENSVVUG00000008641	LARP4B	100	85.792	ENSMMUG00000005279	LARP4B	100	85.792	Macaca_mulatta
ENSVVUG00000008641	LARP4B	100	85.656	ENSMNEG00000014019	LARP4B	100	83.491	Macaca_nemestrina
ENSVVUG00000008641	LARP4B	100	85.676	ENSMLEG00000035198	LARP4B	100	85.676	Mandrillus_leucophaeus
ENSVVUG00000008641	LARP4B	100	55.348	ENSMAMG00000013742	LARP4B	92	56.950	Mastacembelus_armatus
ENSVVUG00000008641	LARP4B	92	59.048	ENSMZEG00005006498	-	96	60.450	Maylandia_zebra
ENSVVUG00000008641	LARP4B	91	56.772	ENSMZEG00005014594	-	100	56.498	Maylandia_zebra
ENSVVUG00000008641	LARP4B	100	73.431	ENSMGAG00000005472	LARP4B	100	73.431	Meleagris_gallopavo
ENSVVUG00000008641	LARP4B	100	85.849	ENSMAUG00000021657	Larp4b	100	87.895	Mesocricetus_auratus
ENSVVUG00000008641	LARP4B	100	81.055	ENSMICG00000001301	LARP4B	100	80.785	Microcebus_murinus
ENSVVUG00000008641	LARP4B	90	87.368	ENSMOCG00000021452	Larp4b	100	87.368	Microtus_ochrogaster
ENSVVUG00000008641	LARP4B	83	59.591	ENSMMOG00000011253	-	91	59.119	Mola_mola
ENSVVUG00000008641	LARP4B	100	75.962	ENSMODG00000005957	LARP4B	100	71.693	Monodelphis_domestica
ENSVVUG00000008641	LARP4B	100	48.663	ENSMALG00000012432	LARP4B	100	49.602	Monopterus_albus
ENSVVUG00000008641	LARP4B	100	85.000	MGP_CAROLIEiJ_G0018216	Larp4b	100	85.135	Mus_caroli
ENSVVUG00000008641	LARP4B	100	84.771	ENSMUSG00000033499	Larp4b	100	87.719	Mus_musculus
ENSVVUG00000008641	LARP4B	100	85.811	MGP_PahariEiJ_G0019266	Larp4b	100	88.028	Mus_pahari
ENSVVUG00000008641	LARP4B	100	84.636	MGP_SPRETEiJ_G0019074	Larp4b	100	87.544	Mus_spretus
ENSVVUG00000008641	LARP4B	100	96.185	ENSMPUG00000016220	LARP4B	97	96.185	Mustela_putorius_furo
ENSVVUG00000008641	LARP4B	94	86.172	ENSMLUG00000005880	LARP4B	100	86.172	Myotis_lucifugus
ENSVVUG00000008641	LARP4B	100	85.792	ENSNGAG00000001750	Larp4b	100	85.792	Nannospalax_galili
ENSVVUG00000008641	LARP4B	80	54.927	ENSNBRG00000020018	LARP4B	88	53.635	Neolamprologus_brichardi
ENSVVUG00000008641	LARP4B	100	85.250	ENSNLEG00000013442	LARP4B	100	85.250	Nomascus_leucogenys
ENSVVUG00000008641	LARP4B	79	86.842	ENSMEUG00000013114	-	70	86.842	Notamacropus_eugenii
ENSVVUG00000008641	LARP4B	98	87.651	ENSOPRG00000003300	LARP4B	100	82.440	Ochotona_princeps
ENSVVUG00000008641	LARP4B	100	81.326	ENSODEG00000001109	LARP4B	100	82.923	Octodon_degus
ENSVVUG00000008641	LARP4B	100	66.745	ENSONIG00000017705	LARP4B	100	57.861	Oreochromis_niloticus
ENSVVUG00000008641	LARP4B	100	74.820	ENSOANG00000006100	LARP4B	100	72.391	Ornithorhynchus_anatinus
ENSVVUG00000008641	LARP4B	99	86.818	ENSOCUG00000004950	LARP4B	97	84.252	Oryctolagus_cuniculus
ENSVVUG00000008641	LARP4B	100	53.836	ENSORLG00000006080	LARP4B	92	55.571	Oryzias_latipes
ENSVVUG00000008641	LARP4B	100	53.442	ENSORLG00020020940	LARP4B	92	55.000	Oryzias_latipes_hni
ENSVVUG00000008641	LARP4B	100	54.088	ENSORLG00015020608	LARP4B	91	56.044	Oryzias_latipes_hsok
ENSVVUG00000008641	LARP4B	100	52.321	ENSOMEG00000019619	LARP4B	92	54.410	Oryzias_melastigma
ENSVVUG00000008641	LARP4B	94	82.454	ENSOGAG00000011540	LARP4B	100	82.454	Otolemur_garnettii
ENSVVUG00000008641	LARP4B	100	87.009	ENSOARG00000015320	LARP4B	98	87.009	Ovis_aries
ENSVVUG00000008641	LARP4B	100	84.844	ENSPPAG00000039232	LARP4B	100	84.844	Pan_paniscus
ENSVVUG00000008641	LARP4B	100	94.005	ENSPPRG00000009489	LARP4B	100	94.005	Panthera_pardus
ENSVVUG00000008641	LARP4B	100	94.005	ENSPTIG00000008543	LARP4B	100	94.005	Panthera_tigris_altaica
ENSVVUG00000008641	LARP4B	100	84.844	ENSPTRG00000002235	LARP4B	100	84.844	Pan_troglodytes
ENSVVUG00000008641	LARP4B	100	85.792	ENSPANG00000023546	LARP4B	100	83.627	Papio_anubis
ENSVVUG00000008641	LARP4B	98	56.434	ENSPKIG00000012368	LARP4B	89	59.649	Paramormyrops_kingsleyae
ENSVVUG00000008641	LARP4B	77	85.714	ENSPSIG00000005600	LARP4B	99	85.714	Pelodiscus_sinensis
ENSVVUG00000008641	LARP4B	97	51.081	ENSPMGG00000008261	LARP4B	87	51.966	Periophthalmus_magnuspinnatus
ENSVVUG00000008641	LARP4B	100	86.333	ENSPEMG00000014052	Larp4b	100	86.333	Peromyscus_maniculatus_bairdii
ENSVVUG00000008641	LARP4B	100	54.172	ENSPFOG00000000029	LARP4B	92	56.545	Poecilia_formosa
ENSVVUG00000008641	LARP4B	100	63.658	ENSPLAG00000002871	LARP4B	88	63.658	Poecilia_latipinna
ENSVVUG00000008641	LARP4B	100	53.607	ENSPMEG00000016361	LARP4B	96	52.474	Poecilia_mexicana
ENSVVUG00000008641	LARP4B	100	85.135	ENSPPYG00000002035	LARP4B	97	85.135	Pongo_abelii
ENSVVUG00000008641	LARP4B	100	85.250	ENSPCOG00000014688	LARP4B	100	85.250	Propithecus_coquereli
ENSVVUG00000008641	LARP4B	85	100.000	ENSPVAG00000009784	LARP4B	88	100.000	Pteropus_vampyrus
ENSVVUG00000008641	LARP4B	100	56.336	ENSPNYG00000024252	LARP4B	92	57.531	Pundamilia_nyererei
ENSVVUG00000008641	LARP4B	97	52.632	ENSPNAG00000028956	larp4b	92	53.043	Pygocentrus_nattereri
ENSVVUG00000008641	LARP4B	100	85.435	ENSRNOG00000015888	Larp4b	100	86.062	Rattus_norvegicus
ENSVVUG00000008641	LARP4B	100	85.521	ENSRBIG00000033294	LARP4B	100	85.521	Rhinopithecus_bieti
ENSVVUG00000008641	LARP4B	100	85.386	ENSRROG00000033879	LARP4B	100	85.386	Rhinopithecus_roxellana
ENSVVUG00000008641	LARP4B	100	79.432	ENSSBOG00000021109	LARP4B	100	79.432	Saimiri_boliviensis_boliviensis
ENSVVUG00000008641	LARP4B	100	76.019	ENSSHAG00000013392	LARP4B	100	74.198	Sarcophilus_harrisii
ENSVVUG00000008641	LARP4B	92	59.254	ENSSFOG00015003256	LARP4B	82	60.116	Scleropages_formosus
ENSVVUG00000008641	LARP4B	83	75.862	ENSSMAG00000005982	-	99	75.862	Scophthalmus_maximus
ENSVVUG00000008641	LARP4B	100	55.901	ENSSDUG00000006704	LARP4B	92	57.682	Seriola_dumerili
ENSVVUG00000008641	LARP4B	80	61.981	ENSSLDG00000020660	LARP4B	91	61.502	Seriola_lalandi_dorsalis
ENSVVUG00000008641	LARP4B	59	100.000	ENSSARG00000001243	-	75	100.000	Sorex_araneus
ENSVVUG00000008641	LARP4B	90	78.268	ENSSPUG00000013734	-	100	78.268	Sphenodon_punctatus
ENSVVUG00000008641	LARP4B	100	71.525	ENSSPUG00000002102	-	100	71.525	Sphenodon_punctatus
ENSVVUG00000008641	LARP4B	85	74.194	ENSSPAG00000014628	LARP4B	92	74.194	Stegastes_partitus
ENSVVUG00000008641	LARP4B	100	86.104	ENSSSCG00000011162	LARP4B	100	87.336	Sus_scrofa
ENSVVUG00000008641	LARP4B	100	76.923	ENSTGUG00000000811	-	100	73.995	Taeniopygia_guttata
ENSVVUG00000008641	LARP4B	98	66.505	ENSTNIG00000007991	LARP4B	100	54.420	Tetraodon_nigroviridis
ENSVVUG00000008641	LARP4B	100	56.494	ENSTNIG00000004571	-	91	58.520	Tetraodon_nigroviridis
ENSVVUG00000008641	LARP4B	89	93.204	ENSTTRG00000011151	LARP4B	90	91.566	Tursiops_truncatus
ENSVVUG00000008641	LARP4B	99	94.216	ENSUAMG00000016461	LARP4B	95	97.826	Ursus_americanus
ENSVVUG00000008641	LARP4B	100	97.548	ENSUMAG00000016127	LARP4B	100	97.548	Ursus_maritimus
ENSVVUG00000008641	LARP4B	57	93.820	ENSVPAG00000000128	-	73	93.820	Vicugna_pacos
ENSVVUG00000008641	LARP4B	99	73.508	ENSXETG00000016882	larp4b	100	68.609	Xenopus_tropicalis
ENSVVUG00000008641	LARP4B	100	51.871	ENSXCOG00000019952	LARP4B	68	85.039	Xiphophorus_couchianus
ENSVVUG00000008641	LARP4B	100	54.135	ENSXMAG00000021533	LARP4B	100	54.307	Xiphophorus_maculatus