EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000008956 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 32159 bases
Position: chrNBDQ01000007.1:31338383-31370541
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000012145	MMR_HSR1	PF01926.23	4.4e-14	1	1
ENSVVUP00000012149	MMR_HSR1	PF01926.23	4.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000015914	LSG1-202	1935	-	ENSVVUP00000012149	644 (aa)	-	-
ENSVVUT00000015911	LSG1-201	1908	-	ENSVVUP00000012145	635 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000008956's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000008956's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000008956	LSG1	97	83.360	ENSG00000041802	LSG1	95	83.360	Homo_sapiens
ENSVVUG00000008956	LSG1	99	64.789	ENSAPOG00000009694	lsg1	97	65.102	Acanthochromis_polyacanthus
ENSVVUG00000008956	LSG1	97	87.879	ENSAMEG00000009343	LSG1	95	87.879	Ailuropoda_melanoleuca
ENSVVUG00000008956	LSG1	98	63.495	ENSACIG00000012406	lsg1	95	64.526	Amphilophus_citrinellus
ENSVVUG00000008956	LSG1	99	63.380	ENSAOCG00000016066	lsg1	97	64.531	Amphiprion_ocellaris
ENSVVUG00000008956	LSG1	99	64.476	ENSAPEG00000003252	lsg1	97	63.158	Amphiprion_percula
ENSVVUG00000008956	LSG1	98	62.754	ENSATEG00000011794	lsg1	95	62.461	Anabas_testudineus
ENSVVUG00000008956	LSG1	97	63.016	ENSACAG00000004222	LSG1	99	62.580	Anolis_carolinensis
ENSVVUG00000008956	LSG1	97	84.320	ENSANAG00000021153	LSG1	95	84.320	Aotus_nancymaae
ENSVVUG00000008956	LSG1	99	62.575	ENSACLG00000000520	lsg1	95	64.013	Astatotilapia_calliptera
ENSVVUG00000008956	LSG1	98	63.385	ENSAMXG00000008271	lsg1	97	63.893	Astyanax_mexicanus
ENSVVUG00000008956	LSG1	97	79.840	ENSBTAG00000008461	LSG1	95	81.280	Bos_taurus
ENSVVUG00000008956	LSG1	64	51.777	WBGene00016907	C53H9.2	90	49.065	Caenorhabditis_elegans
ENSVVUG00000008956	LSG1	97	84.000	ENSCJAG00000013962	LSG1	95	84.000	Callithrix_jacchus
ENSVVUG00000008956	LSG1	97	97.604	ENSCAFG00000013445	LSG1	100	97.604	Canis_familiaris
ENSVVUG00000008956	LSG1	99	96.256	ENSCAFG00020002216	LSG1	99	97.588	Canis_lupus_dingo
ENSVVUG00000008956	LSG1	97	81.789	ENSCHIG00000015769	LSG1	95	81.789	Capra_hircus
ENSVVUG00000008956	LSG1	97	82.400	ENSTSYG00000001447	LSG1	95	82.400	Carlito_syrichta
ENSVVUG00000008956	LSG1	97	74.204	ENSCAPG00000009856	LSG1	99	73.600	Cavia_aperea
ENSVVUG00000008956	LSG1	97	84.491	ENSCCAG00000035744	LSG1	95	84.491	Cebus_capucinus
ENSVVUG00000008956	LSG1	97	84.000	ENSCATG00000042060	LSG1	95	82.560	Cercocebus_atys
ENSVVUG00000008956	LSG1	97	84.480	ENSCSAG00000008796	LSG1	87	84.480	Chlorocebus_sabaeus
ENSVVUG00000008956	LSG1	97	69.108	ENSCPBG00000015941	LSG1	79	69.108	Chrysemys_picta_bellii
ENSVVUG00000008956	LSG1	63	62.105	ENSCING00000007079	-	85	62.105	Ciona_intestinalis
ENSVVUG00000008956	LSG1	70	60.096	ENSCSAVG00000002514	-	88	60.096	Ciona_savignyi
ENSVVUG00000008956	LSG1	97	84.000	ENSCANG00000030709	LSG1	95	84.000	Colobus_angolensis_palliatus
ENSVVUG00000008956	LSG1	97	80.288	ENSCGRG00001019846	Lsg1	95	80.288	Cricetulus_griseus_chok1gshd
ENSVVUG00000008956	LSG1	97	80.288	ENSCGRG00000014617	Lsg1	95	80.288	Cricetulus_griseus_crigri
ENSVVUG00000008956	LSG1	97	63.867	ENSCSEG00000008522	lsg1	95	63.608	Cynoglossus_semilaevis
ENSVVUG00000008956	LSG1	98	64.075	ENSCVAG00000002484	lsg1	99	63.623	Cyprinodon_variegatus
ENSVVUG00000008956	LSG1	99	64.643	ENSDARG00000015352	lsg1	95	66.134	Danio_rerio
ENSVVUG00000008956	LSG1	97	80.892	ENSDNOG00000006224	LSG1	99	77.727	Dasypus_novemcinctus
ENSVVUG00000008956	LSG1	79	65.238	FBgn0266284	Ns3	94	48.408	Drosophila_melanogaster
ENSVVUG00000008956	LSG1	85	95.238	ENSETEG00000003888	LSG1	84	95.238	Echinops_telfairi
ENSVVUG00000008956	LSG1	91	55.102	ENSEBUG00000003119	lsg1	85	54.013	Eptatretus_burgeri
ENSVVUG00000008956	LSG1	97	85.120	ENSEASG00005000678	LSG1	95	85.120	Equus_asinus_asinus
ENSVVUG00000008956	LSG1	97	84.960	ENSECAG00000017659	LSG1	95	84.960	Equus_caballus
ENSVVUG00000008956	LSG1	78	81.197	ENSEEUG00000015217	LSG1	75	81.197	Erinaceus_europaeus
ENSVVUG00000008956	LSG1	99	60.856	ENSELUG00000023973	lsg1	95	62.261	Esox_lucius
ENSVVUG00000008956	LSG1	97	88.498	ENSFCAG00000024957	LSG1	95	88.498	Felis_catus
ENSVVUG00000008956	LSG1	99	63.199	ENSFALG00000007210	LSG1	98	63.199	Ficedula_albicollis
ENSVVUG00000008956	LSG1	97	76.508	ENSFDAG00000017373	LSG1	95	76.960	Fukomys_damarensis
ENSVVUG00000008956	LSG1	97	64.943	ENSFHEG00000003680	lsg1	94	64.725	Fundulus_heteroclitus
ENSVVUG00000008956	LSG1	80	77.674	ENSGMOG00000015834	lsg1	81	77.674	Gadus_morhua
ENSVVUG00000008956	LSG1	94	63.065	ENSGALG00000007058	LSG1	82	64.553	Gallus_gallus
ENSVVUG00000008956	LSG1	97	65.700	ENSGAFG00000015831	lsg1	95	65.378	Gambusia_affinis
ENSVVUG00000008956	LSG1	98	62.133	ENSGACG00000009323	lsg1	94	62.816	Gasterosteus_aculeatus
ENSVVUG00000008956	LSG1	97	84.000	ENSGGOG00000000520	LSG1	95	84.000	Gorilla_gorilla
ENSVVUG00000008956	LSG1	99	62.064	ENSHBUG00000005659	lsg1	95	64.000	Haplochromis_burtoni
ENSVVUG00000008956	LSG1	97	75.040	ENSHGLG00000017390	LSG1	95	74.841	Heterocephalus_glaber_female
ENSVVUG00000008956	LSG1	97	75.040	ENSHGLG00100018587	LSG1	95	74.841	Heterocephalus_glaber_male
ENSVVUG00000008956	LSG1	97	63.942	ENSHCOG00000016848	lsg1	95	63.680	Hippocampus_comes
ENSVVUG00000008956	LSG1	99	64.055	ENSIPUG00000008631	lsg1	96	65.032	Ictalurus_punctatus
ENSVVUG00000008956	LSG1	77	77.778	ENSSTOG00000010234	LSG1	92	80.000	Ictidomys_tridecemlineatus
ENSVVUG00000008956	LSG1	98	78.413	ENSJJAG00000015513	Lsg1	95	78.880	Jaculus_jaculus
ENSVVUG00000008956	LSG1	97	63.200	ENSKMAG00000009681	lsg1	95	63.200	Kryptolebias_marmoratus
ENSVVUG00000008956	LSG1	98	63.027	ENSLBEG00000024261	lsg1	95	63.462	Labrus_bergylta
ENSVVUG00000008956	LSG1	97	65.032	ENSLACG00000013399	LSG1	95	64.818	Latimeria_chalumnae
ENSVVUG00000008956	LSG1	97	63.735	ENSLOCG00000004918	lsg1	95	65.135	Lepisosteus_oculatus
ENSVVUG00000008956	LSG1	97	82.400	ENSLAFG00000012919	-	95	82.400	Loxodonta_africana
ENSVVUG00000008956	LSG1	97	84.480	ENSMFAG00000039903	LSG1	95	83.040	Macaca_fascicularis
ENSVVUG00000008956	LSG1	97	84.480	ENSMMUG00000010708	LSG1	95	84.480	Macaca_mulatta
ENSVVUG00000008956	LSG1	97	84.160	ENSMNEG00000031538	LSG1	95	82.560	Macaca_nemestrina
ENSVVUG00000008956	LSG1	97	84.480	ENSMLEG00000041184	LSG1	95	84.480	Mandrillus_leucophaeus
ENSVVUG00000008956	LSG1	99	61.203	ENSMAMG00000000470	lsg1	95	62.559	Mastacembelus_armatus
ENSVVUG00000008956	LSG1	99	62.367	ENSMZEG00005017865	lsg1	95	64.320	Maylandia_zebra
ENSVVUG00000008956	LSG1	91	63.851	ENSMGAG00000007050	LSG1	99	64.566	Meleagris_gallopavo
ENSVVUG00000008956	LSG1	91	78.041	ENSMAUG00000016976	Lsg1	87	80.714	Mesocricetus_auratus
ENSVVUG00000008956	LSG1	97	81.920	ENSMICG00000049087	LSG1	95	81.920	Microcebus_murinus
ENSVVUG00000008956	LSG1	97	79.677	ENSMOCG00000022136	Lsg1	95	79.871	Microtus_ochrogaster
ENSVVUG00000008956	LSG1	81	74.324	ENSMMOG00000008884	lsg1	90	74.324	Mola_mola
ENSVVUG00000008956	LSG1	98	58.150	ENSMODG00000019828	LSG1	96	57.656	Monodelphis_domestica
ENSVVUG00000008956	LSG1	97	77.796	MGP_CAROLIEiJ_G0020648	Lsg1	95	77.796	Mus_caroli
ENSVVUG00000008956	LSG1	97	78.275	ENSMUSG00000022538	Lsg1	95	78.275	Mus_musculus
ENSVVUG00000008956	LSG1	97	79.073	MGP_PahariEiJ_G0016352	Lsg1	95	79.073	Mus_pahari
ENSVVUG00000008956	LSG1	97	78.594	MGP_SPRETEiJ_G0021544	Lsg1	95	78.594	Mus_spretus
ENSVVUG00000008956	LSG1	97	89.137	ENSMPUG00000003734	LSG1	95	89.137	Mustela_putorius_furo
ENSVVUG00000008956	LSG1	97	84.530	ENSMLUG00000012548	LSG1	95	84.530	Myotis_lucifugus
ENSVVUG00000008956	LSG1	97	80.291	ENSNGAG00000021872	Lsg1	95	78.675	Nannospalax_galili
ENSVVUG00000008956	LSG1	97	84.320	ENSNLEG00000008293	LSG1	95	84.320	Nomascus_leucogenys
ENSVVUG00000008956	LSG1	70	71.134	ENSMEUG00000009041	-	82	71.134	Notamacropus_eugenii
ENSVVUG00000008956	LSG1	99	60.704	ENSONIG00000002635	lsg1	95	63.391	Oreochromis_niloticus
ENSVVUG00000008956	LSG1	97	69.811	ENSOANG00000012742	LSG1	99	69.108	Ornithorhynchus_anatinus
ENSVVUG00000008956	LSG1	97	81.760	ENSOCUG00000004817	LSG1	95	81.760	Oryctolagus_cuniculus
ENSVVUG00000008956	LSG1	97	64.563	ENSORLG00000007695	lsg1	95	64.103	Oryzias_latipes
ENSVVUG00000008956	LSG1	97	64.078	ENSORLG00020016286	lsg1	95	62.975	Oryzias_latipes_hni
ENSVVUG00000008956	LSG1	97	64.887	ENSORLG00015012025	lsg1	95	64.887	Oryzias_latipes_hsok
ENSVVUG00000008956	LSG1	97	62.240	ENSOMEG00000022379	lsg1	95	62.480	Oryzias_melastigma
ENSVVUG00000008956	LSG1	97	83.625	ENSOGAG00000003475	LSG1	95	83.625	Otolemur_garnettii
ENSVVUG00000008956	LSG1	97	81.659	ENSOARG00000020403	LSG1	95	81.659	Ovis_aries
ENSVVUG00000008956	LSG1	97	83.840	ENSPPAG00000029271	LSG1	95	83.840	Pan_paniscus
ENSVVUG00000008956	LSG1	97	87.362	ENSPPRG00000010281	LSG1	95	87.362	Panthera_pardus
ENSVVUG00000008956	LSG1	97	88.179	ENSPTIG00000010789	LSG1	95	88.179	Panthera_tigris_altaica
ENSVVUG00000008956	LSG1	97	83.680	ENSPTRG00000015760	LSG1	95	83.680	Pan_troglodytes
ENSVVUG00000008956	LSG1	97	84.000	ENSPANG00000018249	LSG1	95	82.560	Papio_anubis
ENSVVUG00000008956	LSG1	98	63.125	ENSPKIG00000002895	lsg1	95	63.349	Paramormyrops_kingsleyae
ENSVVUG00000008956	LSG1	97	64.107	ENSPSIG00000009821	LSG1	99	63.693	Pelodiscus_sinensis
ENSVVUG00000008956	LSG1	97	63.593	ENSPMGG00000000931	lsg1	100	63.208	Periophthalmus_magnuspinnatus
ENSVVUG00000008956	LSG1	97	78.275	ENSPEMG00000012082	-	95	77.796	Peromyscus_maniculatus_bairdii
ENSVVUG00000008956	LSG1	97	58.998	ENSPMAG00000007451	lsg1	95	58.998	Petromyzon_marinus
ENSVVUG00000008956	LSG1	97	64.398	ENSPCIG00000013890	LSG1	78	64.398	Phascolarctos_cinereus
ENSVVUG00000008956	LSG1	97	65.224	ENSPFOG00000021882	lsg1	95	65.440	Poecilia_formosa
ENSVVUG00000008956	LSG1	97	64.912	ENSPLAG00000019536	lsg1	95	66.074	Poecilia_latipinna
ENSVVUG00000008956	LSG1	97	64.377	ENSPMEG00000017281	lsg1	95	64.593	Poecilia_mexicana
ENSVVUG00000008956	LSG1	97	54.173	ENSPREG00000006048	lsg1	94	54.864	Poecilia_reticulata
ENSVVUG00000008956	LSG1	92	80.066	ENSPPYG00000014425	LSG1	95	82.609	Pongo_abelii
ENSVVUG00000008956	LSG1	87	97.619	ENSPCAG00000005511	LSG1	85	97.619	Procavia_capensis
ENSVVUG00000008956	LSG1	97	84.653	ENSPCOG00000012360	LSG1	95	84.653	Propithecus_coquereli
ENSVVUG00000008956	LSG1	99	62.425	ENSPNYG00000021994	lsg1	95	63.854	Pundamilia_nyererei
ENSVVUG00000008956	LSG1	97	65.924	ENSPNAG00000015533	lsg1	95	65.760	Pygocentrus_nattereri
ENSVVUG00000008956	LSG1	97	78.730	ENSRNOG00000001727	Lsg1	95	78.730	Rattus_norvegicus
ENSVVUG00000008956	LSG1	97	83.200	ENSRBIG00000029053	LSG1	95	83.200	Rhinopithecus_bieti
ENSVVUG00000008956	LSG1	97	83.200	ENSRROG00000037702	LSG1	95	83.200	Rhinopithecus_roxellana
ENSVVUG00000008956	LSG1	62	55.689	YGL099W	LSG1	64	55.689	Saccharomyces_cerevisiae
ENSVVUG00000008956	LSG1	97	84.640	ENSSBOG00000034938	LSG1	95	84.640	Saimiri_boliviensis_boliviensis
ENSVVUG00000008956	LSG1	80	64.896	ENSSHAG00000003487	LSG1	100	63.878	Sarcophilus_harrisii
ENSVVUG00000008956	LSG1	97	64.094	ENSSFOG00015008955	lsg1	99	62.142	Scleropages_formosus
ENSVVUG00000008956	LSG1	98	64.067	ENSSDUG00000004622	lsg1	95	64.151	Seriola_dumerili
ENSVVUG00000008956	LSG1	98	64.075	ENSSLDG00000010869	lsg1	95	64.904	Seriola_lalandi_dorsalis
ENSVVUG00000008956	LSG1	71	90.435	ENSSARG00000012981	LSG1	69	90.435	Sorex_araneus
ENSVVUG00000008956	LSG1	99	65.766	ENSSPUG00000016347	LSG1	95	66.719	Sphenodon_punctatus
ENSVVUG00000008956	LSG1	98	58.269	ENSSPAG00000005508	lsg1	97	65.087	Stegastes_partitus
ENSVVUG00000008956	LSG1	97	82.428	ENSSSCG00000011827	LSG1	95	82.428	Sus_scrofa
ENSVVUG00000008956	LSG1	91	63.087	ENSTGUG00000009068	LSG1	100	62.000	Taeniopygia_guttata
ENSVVUG00000008956	LSG1	97	61.477	ENSTRUG00000017380	lsg1	95	61.958	Takifugu_rubripes
ENSVVUG00000008956	LSG1	97	64.603	ENSTNIG00000015570	lsg1	95	64.921	Tetraodon_nigroviridis
ENSVVUG00000008956	LSG1	97	74.641	ENSTTRG00000000559	LSG1	95	74.641	Tursiops_truncatus
ENSVVUG00000008956	LSG1	97	88.658	ENSUAMG00000012454	LSG1	95	88.658	Ursus_americanus
ENSVVUG00000008956	LSG1	97	88.658	ENSUMAG00000000855	LSG1	95	88.658	Ursus_maritimus
ENSVVUG00000008956	LSG1	97	78.914	ENSVPAG00000012400	LSG1	100	78.914	Vicugna_pacos
ENSVVUG00000008956	LSG1	97	63.880	ENSXETG00000003451	lsg1	95	64.537	Xenopus_tropicalis
ENSVVUG00000008956	LSG1	97	65.428	ENSXCOG00000003239	lsg1	95	64.516	Xiphophorus_couchianus
ENSVVUG00000008956	LSG1	97	63.924	ENSXMAG00000005536	lsg1	95	64.082	Xiphophorus_maculatus