EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000008976 (Gene tree)
Gene ID: -
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 99452 bases
Position: chrNBDQ01000036.1:6457653-6557104
Accession: 112921809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000012208	EST1	PF10374.9	9.3e-25	1	1
ENSVVUP00000012188	EST1	PF10374.9	9.6e-25	1	1
ENSVVUP00000012179	EST1	PF10374.9	9.9e-25	1	1
ENSVVUP00000012175	EST1	PF10374.9	1e-24	1	1
ENSVVUP00000012165	EST1	PF10374.9	1.1e-24	1	1
ENSVVUP00000012226	EST1	PF10374.9	1.1e-24	1	1
ENSVVUP00000012160	EST1	PF10374.9	1.1e-24	1	1
ENSVVUP00000012239	EST1	PF10374.9	1.1e-24	1	1
ENSVVUP00000012208	EST1_DNA_bind	PF10373.9	2.2e-55	1	1
ENSVVUP00000012188	EST1_DNA_bind	PF10373.9	2.3e-55	1	1
ENSVVUP00000012179	EST1_DNA_bind	PF10373.9	2.4e-55	1	1
ENSVVUP00000012175	EST1_DNA_bind	PF10373.9	2.5e-55	1	1
ENSVVUP00000012165	EST1_DNA_bind	PF10373.9	2.6e-55	1	1
ENSVVUP00000012226	EST1_DNA_bind	PF10373.9	2.6e-55	1	1
ENSVVUP00000012160	EST1_DNA_bind	PF10373.9	2.7e-55	1	1
ENSVVUP00000012239	EST1_DNA_bind	PF10373.9	2.7e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000015947	SMG7-204	3898	-	ENSVVUP00000012179	1113 (aa)	-	-
ENSVVUT00000015942	SMG7-203	3979	-	ENSVVUP00000012175	1140 (aa)	-	-
ENSVVUT00000015979	SMG7-206	3748	-	ENSVVUP00000012208	1063 (aa)	-	-
ENSVVUT00000015927	SMG7-201	3750	-	ENSVVUP00000012160	1180 (aa)	-	-
ENSVVUT00000015956	SMG7-205	3829	-	ENSVVUP00000012188	1090 (aa)	-	-
ENSVVUT00000015932	SMG7-202	4118	-	ENSVVUP00000012165	1169 (aa)	XP_025856947	UPI000DF72018
ENSVVUT00000015997	SMG7-207	4256	-	ENSVVUP00000012226	1169 (aa)	XP_025856947	UPI000DF72018
ENSVVUT00000016010	SMG7-208	4139	-	ENSVVUP00000012239	1191 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000008976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000008976's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000008976	SMG7	100	97.434	ENSG00000116698	SMG7	100	98.667	Homo_sapiens
ENSVVUG00000008976	SMG7	89	71.108	ENSAPOG00000009611	smg7	95	71.710	Acanthochromis_polyacanthus
ENSVVUG00000008976	SMG7	96	97.970	ENSAMEG00000002357	SMG7	100	94.843	Ailuropoda_melanoleuca
ENSVVUG00000008976	SMG7	97	63.271	ENSACIG00000015152	smg7	100	63.628	Amphilophus_citrinellus
ENSVVUG00000008976	SMG7	99	67.943	ENSAOCG00000013538	smg7	99	64.885	Amphiprion_ocellaris
ENSVVUG00000008976	SMG7	99	67.943	ENSAPEG00000007851	smg7	99	64.781	Amphiprion_percula
ENSVVUG00000008976	SMG7	99	63.815	ENSATEG00000006931	smg7	99	64.041	Anabas_testudineus
ENSVVUG00000008976	SMG7	100	85.652	ENSAPLG00000015811	SMG7	100	85.564	Anas_platyrhynchos
ENSVVUG00000008976	SMG7	100	88.384	ENSACAG00000014989	SMG7	100	85.046	Anolis_carolinensis
ENSVVUG00000008976	SMG7	100	94.924	ENSANAG00000028114	SMG7	100	93.513	Aotus_nancymaae
ENSVVUG00000008976	SMG7	99	70.192	ENSACLG00000022079	smg7	94	70.192	Astatotilapia_calliptera
ENSVVUG00000008976	SMG7	99	68.657	ENSAMXG00000020809	smg7	99	67.391	Astyanax_mexicanus
ENSVVUG00000008976	SMG7	100	97.094	ENSBTAG00000008003	SMG7	100	97.094	Bos_taurus
ENSVVUG00000008976	SMG7	99	97.213	ENSCJAG00000005135	SMG7	100	97.170	Callithrix_jacchus
ENSVVUG00000008976	SMG7	100	99.829	ENSCAFG00000013276	SMG7	100	99.829	Canis_familiaris
ENSVVUG00000008976	SMG7	100	99.829	ENSCAFG00020015475	SMG7	100	99.829	Canis_lupus_dingo
ENSVVUG00000008976	SMG7	99	96.649	ENSCHIG00000018192	SMG7	99	96.734	Capra_hircus
ENSVVUG00000008976	SMG7	100	96.667	ENSTSYG00000002667	SMG7	100	96.667	Carlito_syrichta
ENSVVUG00000008976	SMG7	99	97.173	ENSCPOG00000008906	SMG7	100	97.167	Cavia_porcellus
ENSVVUG00000008976	SMG7	100	93.492	ENSCCAG00000028596	SMG7	100	93.492	Cebus_capucinus
ENSVVUG00000008976	SMG7	100	97.521	ENSCATG00000011063	SMG7	100	97.521	Cercocebus_atys
ENSVVUG00000008976	SMG7	100	97.123	ENSCLAG00000010751	SMG7	100	96.670	Chinchilla_lanigera
ENSVVUG00000008976	SMG7	100	97.350	ENSCSAG00000012654	SMG7	100	97.350	Chlorocebus_sabaeus
ENSVVUG00000008976	SMG7	91	92.336	ENSCHOG00000010522	SMG7	94	88.319	Choloepus_hoffmanni
ENSVVUG00000008976	SMG7	100	89.899	ENSCPBG00000015724	SMG7	100	87.983	Chrysemys_picta_bellii
ENSVVUG00000008976	SMG7	99	93.528	ENSCANG00000015680	SMG7	100	93.537	Colobus_angolensis_palliatus
ENSVVUG00000008976	SMG7	100	95.706	ENSCGRG00001013705	Smg7	100	95.530	Cricetulus_griseus_chok1gshd
ENSVVUG00000008976	SMG7	99	95.587	ENSCGRG00000018401	Smg7	100	95.474	Cricetulus_griseus_crigri
ENSVVUG00000008976	SMG7	98	66.827	ENSCVAG00000011842	smg7	100	68.500	Cyprinodon_variegatus
ENSVVUG00000008976	SMG7	99	66.473	ENSDARG00000060767	smg7	99	65.325	Danio_rerio
ENSVVUG00000008976	SMG7	100	96.319	ENSDORG00000007331	Smg7	100	96.319	Dipodomys_ordii
ENSVVUG00000008976	SMG7	97	96.105	ENSETEG00000002654	SMG7	100	96.105	Echinops_telfairi
ENSVVUG00000008976	SMG7	100	98.247	ENSEASG00005006524	SMG7	100	98.247	Equus_asinus_asinus
ENSVVUG00000008976	SMG7	100	98.335	ENSECAG00000004313	SMG7	100	98.335	Equus_caballus
ENSVVUG00000008976	SMG7	97	96.471	ENSEEUG00000002024	SMG7	94	96.471	Erinaceus_europaeus
ENSVVUG00000008976	SMG7	99	68.868	ENSELUG00000010293	smg7	99	66.211	Esox_lucius
ENSVVUG00000008976	SMG7	100	98.733	ENSFCAG00000010900	SMG7	100	98.733	Felis_catus
ENSVVUG00000008976	SMG7	98	85.930	ENSFALG00000003047	SMG7	100	83.163	Ficedula_albicollis
ENSVVUG00000008976	SMG7	99	96.225	ENSFDAG00000012121	SMG7	99	96.613	Fukomys_damarensis
ENSVVUG00000008976	SMG7	99	62.532	ENSFHEG00000011073	smg7	99	62.995	Fundulus_heteroclitus
ENSVVUG00000008976	SMG7	96	57.244	ENSGMOG00000004916	smg7	92	68.029	Gadus_morhua
ENSVVUG00000008976	SMG7	100	85.490	ENSGALG00000004667	SMG7	100	85.927	Gallus_gallus
ENSVVUG00000008976	SMG7	99	62.748	ENSGAFG00000019000	smg7	99	62.998	Gambusia_affinis
ENSVVUG00000008976	SMG7	97	65.359	ENSGACG00000001634	smg7	99	64.572	Gasterosteus_aculeatus
ENSVVUG00000008976	SMG7	100	97.265	ENSGGOG00000002342	SMG7	100	97.265	Gorilla_gorilla
ENSVVUG00000008976	SMG7	99	70.192	ENSHBUG00000003726	smg7	97	72.081	Haplochromis_burtoni
ENSVVUG00000008976	SMG7	98	96.706	ENSHGLG00000009353	SMG7	100	96.702	Heterocephalus_glaber_female
ENSVVUG00000008976	SMG7	100	88.869	ENSHGLG00100004878	-	100	88.694	Heterocephalus_glaber_male
ENSVVUG00000008976	SMG7	98	95.009	ENSHGLG00100009637	-	100	95.009	Heterocephalus_glaber_male
ENSVVUG00000008976	SMG7	99	70.297	ENSIPUG00000016997	smg7	99	67.422	Ictalurus_punctatus
ENSVVUG00000008976	SMG7	100	97.814	ENSSTOG00000000401	SMG7	100	97.721	Ictidomys_tridecemlineatus
ENSVVUG00000008976	SMG7	100	94.479	ENSJJAG00000012351	Smg7	100	94.566	Jaculus_jaculus
ENSVVUG00000008976	SMG7	97	60.176	ENSKMAG00000004900	smg7	100	60.847	Kryptolebias_marmoratus
ENSVVUG00000008976	SMG7	99	64.731	ENSLBEG00000002983	smg7	99	64.471	Labrus_bergylta
ENSVVUG00000008976	SMG7	52	64.098	ENSLBEG00000005220	-	75	64.098	Labrus_bergylta
ENSVVUG00000008976	SMG7	99	77.889	ENSLACG00000000972	SMG7	99	76.108	Latimeria_chalumnae
ENSVVUG00000008976	SMG7	99	66.888	ENSLOCG00000002010	smg7	93	75.758	Lepisosteus_oculatus
ENSVVUG00000008976	SMG7	99	97.173	ENSLAFG00000008186	SMG7	100	97.215	Loxodonta_africana
ENSVVUG00000008976	SMG7	100	97.546	ENSMFAG00000031653	SMG7	100	97.546	Macaca_fascicularis
ENSVVUG00000008976	SMG7	100	97.521	ENSMMUG00000018458	SMG7	100	97.521	Macaca_mulatta
ENSVVUG00000008976	SMG7	100	93.668	ENSMNEG00000034798	SMG7	100	93.668	Macaca_nemestrina
ENSVVUG00000008976	SMG7	100	97.521	ENSMLEG00000037170	SMG7	100	97.521	Mandrillus_leucophaeus
ENSVVUG00000008976	SMG7	87	64.468	ENSMAMG00000018733	smg7	84	64.552	Mastacembelus_armatus
ENSVVUG00000008976	SMG7	99	70.192	ENSMZEG00005015247	smg7	94	70.192	Maylandia_zebra
ENSVVUG00000008976	SMG7	97	85.355	ENSMGAG00000001561	SMG7	98	85.624	Meleagris_gallopavo
ENSVVUG00000008976	SMG7	100	96.318	ENSMAUG00000019484	Smg7	100	96.144	Mesocricetus_auratus
ENSVVUG00000008976	SMG7	99	97.792	ENSMICG00000007145	SMG7	100	97.909	Microcebus_murinus
ENSVVUG00000008976	SMG7	100	96.318	ENSMOCG00000020748	Smg7	100	96.144	Microtus_ochrogaster
ENSVVUG00000008976	SMG7	99	62.294	ENSMMOG00000001524	smg7	99	62.663	Mola_mola
ENSVVUG00000008976	SMG7	92	88.520	ENSMODG00000007139	SMG7	99	88.615	Monodelphis_domestica
ENSVVUG00000008976	SMG7	99	68.293	ENSMALG00000000061	smg7	94	69.154	Monopterus_albus
ENSVVUG00000008976	SMG7	100	95.793	MGP_CAROLIEiJ_G0014704	Smg7	100	95.267	Mus_caroli
ENSVVUG00000008976	SMG7	100	95.618	ENSMUSG00000042772	Smg7	100	95.443	Mus_musculus
ENSVVUG00000008976	SMG7	100	95.706	MGP_PahariEiJ_G0027940	Smg7	100	95.530	Mus_pahari
ENSVVUG00000008976	SMG7	100	95.706	MGP_SPRETEiJ_G0015511	Smg7	100	95.530	Mus_spretus
ENSVVUG00000008976	SMG7	98	98.930	ENSMPUG00000011732	SMG7	97	98.930	Mustela_putorius_furo
ENSVVUG00000008976	SMG7	99	97.213	ENSMLUG00000015417	SMG7	99	97.176	Myotis_lucifugus
ENSVVUG00000008976	SMG7	99	96.512	ENSNGAG00000009836	Smg7	100	95.993	Nannospalax_galili
ENSVVUG00000008976	SMG7	98	60.246	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSVVUG00000008976	SMG7	100	97.607	ENSNLEG00000018018	SMG7	100	97.607	Nomascus_leucogenys
ENSVVUG00000008976	SMG7	77	84.866	ENSMEUG00000004681	SMG7	77	85.216	Notamacropus_eugenii
ENSVVUG00000008976	SMG7	96	87.500	ENSOPRG00000013942	SMG7	96	84.918	Ochotona_princeps
ENSVVUG00000008976	SMG7	100	96.893	ENSODEG00000010390	SMG7	100	96.582	Octodon_degus
ENSVVUG00000008976	SMG7	99	64.347	ENSONIG00000000277	smg7	99	63.941	Oreochromis_niloticus
ENSVVUG00000008976	SMG7	98	91.263	ENSOANG00000000994	SMG7	100	91.312	Ornithorhynchus_anatinus
ENSVVUG00000008976	SMG7	99	90.708	ENSOCUG00000005887	SMG7	96	89.559	Oryctolagus_cuniculus
ENSVVUG00000008976	SMG7	95	66.827	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSVVUG00000008976	SMG7	95	67.308	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSVVUG00000008976	SMG7	99	64.491	ENSORLG00015012289	smg7	99	63.111	Oryzias_latipes_hsok
ENSVVUG00000008976	SMG7	99	62.729	ENSOMEG00000002328	smg7	99	63.092	Oryzias_melastigma
ENSVVUG00000008976	SMG7	97	96.552	ENSOGAG00000003107	SMG7	94	96.915	Otolemur_garnettii
ENSVVUG00000008976	SMG7	100	96.667	ENSOARG00000001352	SMG7	100	96.667	Ovis_aries
ENSVVUG00000008976	SMG7	100	93.668	ENSPPAG00000031619	SMG7	100	93.668	Pan_paniscus
ENSVVUG00000008976	SMG7	99	98.801	ENSPPRG00000011222	SMG7	100	98.801	Panthera_pardus
ENSVVUG00000008976	SMG7	96	98.723	ENSPTIG00000007242	SMG7	100	94.843	Panthera_tigris_altaica
ENSVVUG00000008976	SMG7	97	97.583	ENSPTRG00000001764	SMG7	100	93.668	Pan_troglodytes
ENSVVUG00000008976	SMG7	100	97.521	ENSPANG00000004520	SMG7	100	97.521	Papio_anubis
ENSVVUG00000008976	SMG7	99	64.950	ENSPKIG00000007242	smg7	99	68.000	Paramormyrops_kingsleyae
ENSVVUG00000008976	SMG7	99	91.174	ENSPSIG00000012201	SMG7	99	90.556	Pelodiscus_sinensis
ENSVVUG00000008976	SMG7	55	57.653	ENSPMGG00000021833	smg7	79	70.796	Periophthalmus_magnuspinnatus
ENSVVUG00000008976	SMG7	100	94.917	ENSPEMG00000011315	Smg7	100	94.741	Peromyscus_maniculatus_bairdii
ENSVVUG00000008976	SMG7	100	91.919	ENSPCIG00000003786	SMG7	100	90.909	Phascolarctos_cinereus
ENSVVUG00000008976	SMG7	99	65.865	ENSPFOG00000019219	smg7	99	62.717	Poecilia_formosa
ENSVVUG00000008976	SMG7	99	62.597	ENSPLAG00000001446	smg7	99	62.511	Poecilia_latipinna
ENSVVUG00000008976	SMG7	96	61.807	ENSPMEG00000005218	smg7	99	61.717	Poecilia_mexicana
ENSVVUG00000008976	SMG7	86	61.238	ENSPREG00000019039	smg7	92	60.227	Poecilia_reticulata
ENSVVUG00000008976	SMG7	100	93.755	ENSPPYG00000000427	SMG7	100	93.755	Pongo_abelii
ENSVVUG00000008976	SMG7	89	93.125	ENSPCAG00000008360	SMG7	91	89.655	Procavia_capensis
ENSVVUG00000008976	SMG7	100	98.033	ENSPCOG00000011996	SMG7	100	98.033	Propithecus_coquereli
ENSVVUG00000008976	SMG7	92	92.065	ENSPVAG00000000851	SMG7	89	92.404	Pteropus_vampyrus
ENSVVUG00000008976	SMG7	99	69.565	ENSPNYG00000007643	smg7	94	69.565	Pundamilia_nyererei
ENSVVUG00000008976	SMG7	99	66.580	ENSPNAG00000011374	smg7	98	69.192	Pygocentrus_nattereri
ENSVVUG00000008976	SMG7	100	96.087	ENSRNOG00000027962	Smg7	100	96.032	Rattus_norvegicus
ENSVVUG00000008976	SMG7	100	97.436	ENSRBIG00000036316	SMG7	100	97.436	Rhinopithecus_bieti
ENSVVUG00000008976	SMG7	100	97.546	ENSRROG00000035719	SMG7	100	97.546	Rhinopithecus_roxellana
ENSVVUG00000008976	SMG7	100	97.583	ENSSBOG00000023454	SMG7	100	97.458	Saimiri_boliviensis_boliviensis
ENSVVUG00000008976	SMG7	100	88.411	ENSSHAG00000013147	SMG7	100	88.235	Sarcophilus_harrisii
ENSVVUG00000008976	SMG7	99	75.635	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSVVUG00000008976	SMG7	99	65.004	ENSSMAG00000006067	smg7	99	65.062	Scophthalmus_maximus
ENSVVUG00000008976	SMG7	99	63.574	ENSSDUG00000017543	smg7	99	63.969	Seriola_dumerili
ENSVVUG00000008976	SMG7	99	86.396	ENSSPUG00000002064	SMG7	99	86.307	Sphenodon_punctatus
ENSVVUG00000008976	SMG7	100	64.823	ENSSPAG00000008733	smg7	100	64.329	Stegastes_partitus
ENSVVUG00000008976	SMG7	100	98.389	ENSSSCG00000015558	SMG7	100	98.247	Sus_scrofa
ENSVVUG00000008976	SMG7	99	85.639	ENSTGUG00000003928	SMG7	100	85.991	Taeniopygia_guttata
ENSVVUG00000008976	SMG7	99	65.829	ENSTNIG00000002802	smg7	99	63.659	Tetraodon_nigroviridis
ENSVVUG00000008976	SMG7	77	95.339	ENSTBEG00000003220	SMG7	75	95.339	Tupaia_belangeri
ENSVVUG00000008976	SMG7	96	97.907	ENSTTRG00000014778	SMG7	94	97.900	Tursiops_truncatus
ENSVVUG00000008976	SMG7	96	99.046	ENSUAMG00000017473	SMG7	100	99.046	Ursus_americanus
ENSVVUG00000008976	SMG7	96	99.046	ENSUMAG00000016389	SMG7	100	99.046	Ursus_maritimus
ENSVVUG00000008976	SMG7	100	69.404	ENSXETG00000012528	smg7	100	69.618	Xenopus_tropicalis
ENSVVUG00000008976	SMG7	99	62.985	ENSXMAG00000007123	smg7	99	63.072	Xiphophorus_maculatus