EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000009010 (Gene tree)
Gene ID: -
Gene Symbol: APEX1
Alias: APE|APE-1|APEN|APEX|APX|HAP1|REF-1|REF1
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 2856 bases
Position: chrNBDQ01000010.1:14305581-14308436
Accession: 112914843
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000012235	Exo_endo_phos	PF03372.23	2.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000016006	APEX1-201	1596	-	ENSVVUP00000012235	318 (aa)	XP_025847864	UPI000DF6A7C2

Gene Model

Click here to download ENSVVUG00000009010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000009010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000009010	APEX1	100	94.654	ENSG00000100823	APEX1	100	94.654	Homo_sapiens
ENSVVUG00000009010	APEX1	88	69.534	ENSAPOG00000017002	apex1	91	69.534	Acanthochromis_polyacanthus
ENSVVUG00000009010	APEX1	100	94.969	ENSAMEG00000005418	APEX1	100	94.969	Ailuropoda_melanoleuca
ENSVVUG00000009010	APEX1	87	70.863	ENSACIG00000010653	apex1	94	70.968	Amphilophus_citrinellus
ENSVVUG00000009010	APEX1	99	65.190	ENSAOCG00000009649	apex1	99	64.984	Amphiprion_ocellaris
ENSVVUG00000009010	APEX1	99	65.190	ENSAPEG00000021453	apex1	99	64.984	Amphiprion_percula
ENSVVUG00000009010	APEX1	99	67.722	ENSATEG00000002883	apex1	97	67.722	Anabas_testudineus
ENSVVUG00000009010	APEX1	100	69.876	ENSACAG00000008099	APEX1	100	69.876	Anolis_carolinensis
ENSVVUG00000009010	APEX1	100	95.912	ENSANAG00000030117	APEX1	100	95.912	Aotus_nancymaae
ENSVVUG00000009010	APEX1	86	71.273	ENSACLG00000018441	apex1	99	66.139	Astatotilapia_calliptera
ENSVVUG00000009010	APEX1	100	65.625	ENSAMXG00000034699	apex1	100	65.312	Astyanax_mexicanus
ENSVVUG00000009010	APEX1	100	93.082	ENSBTAG00000002745	APEX1	100	93.082	Bos_taurus
ENSVVUG00000009010	APEX1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSVVUG00000009010	APEX1	100	95.912	ENSCJAG00000009726	APEX1	100	95.912	Callithrix_jacchus
ENSVVUG00000009010	APEX1	100	99.371	ENSCAFG00000032033	APEX1	100	99.371	Canis_familiaris
ENSVVUG00000009010	APEX1	100	99.371	ENSCAFG00020014377	-	100	99.371	Canis_lupus_dingo
ENSVVUG00000009010	APEX1	54	98.837	ENSCAFG00020023002	-	96	98.837	Canis_lupus_dingo
ENSVVUG00000009010	APEX1	98	74.038	ENSCHIG00000014537	-	99	74.038	Capra_hircus
ENSVVUG00000009010	APEX1	100	93.082	ENSCHIG00000007298	-	100	93.082	Capra_hircus
ENSVVUG00000009010	APEX1	100	93.396	ENSTSYG00000034813	APEX1	100	93.396	Carlito_syrichta
ENSVVUG00000009010	APEX1	85	88.561	ENSCAPG00000016235	APEX1	91	97.034	Cavia_aperea
ENSVVUG00000009010	APEX1	100	93.396	ENSCPOG00000030909	APEX1	100	93.396	Cavia_porcellus
ENSVVUG00000009010	APEX1	100	82.390	ENSCCAG00000031931	-	100	82.390	Cebus_capucinus
ENSVVUG00000009010	APEX1	100	95.912	ENSCCAG00000033056	-	100	95.912	Cebus_capucinus
ENSVVUG00000009010	APEX1	100	94.340	ENSCATG00000015580	APEX1	100	94.340	Cercocebus_atys
ENSVVUG00000009010	APEX1	100	93.396	ENSCLAG00000001002	APEX1	100	93.396	Chinchilla_lanigera
ENSVVUG00000009010	APEX1	100	94.025	ENSCSAG00000016685	-	100	94.025	Chlorocebus_sabaeus
ENSVVUG00000009010	APEX1	100	94.025	ENSCSAG00000016670	-	100	94.025	Chlorocebus_sabaeus
ENSVVUG00000009010	APEX1	100	70.846	ENSCPBG00000009567	APEX1	100	70.846	Chrysemys_picta_bellii
ENSVVUG00000009010	APEX1	91	54.576	ENSCING00000008137	-	83	58.779	Ciona_intestinalis
ENSVVUG00000009010	APEX1	98	47.604	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSVVUG00000009010	APEX1	100	94.654	ENSCANG00000030726	APEX1	100	94.654	Colobus_angolensis_palliatus
ENSVVUG00000009010	APEX1	100	91.824	ENSCGRG00001017046	Apex1	100	91.824	Cricetulus_griseus_chok1gshd
ENSVVUG00000009010	APEX1	100	91.824	ENSCGRG00000008984	Apex1	100	91.824	Cricetulus_griseus_crigri
ENSVVUG00000009010	APEX1	99	65.094	ENSCSEG00000017499	apex1	99	64.151	Cynoglossus_semilaevis
ENSVVUG00000009010	APEX1	99	66.139	ENSCVAG00000022075	apex1	99	66.139	Cyprinodon_variegatus
ENSVVUG00000009010	APEX1	100	66.352	ENSDARG00000045843	apex1	100	64.798	Danio_rerio
ENSVVUG00000009010	APEX1	100	89.623	ENSDNOG00000042234	APEX1	95	89.623	Dasypus_novemcinctus
ENSVVUG00000009010	APEX1	100	93.711	ENSDORG00000001616	Apex1	100	93.711	Dipodomys_ordii
ENSVVUG00000009010	APEX1	100	92.767	ENSETEG00000004855	-	100	92.767	Echinops_telfairi
ENSVVUG00000009010	APEX1	75	64.435	ENSEBUG00000000622	-	92	64.435	Eptatretus_burgeri
ENSVVUG00000009010	APEX1	100	95.597	ENSEASG00005017489	APEX1	74	95.597	Equus_asinus_asinus
ENSVVUG00000009010	APEX1	100	95.597	ENSECAG00000022325	APEX1	82	95.597	Equus_caballus
ENSVVUG00000009010	APEX1	91	93.056	ENSEEUG00000012569	APEX1	100	93.056	Erinaceus_europaeus
ENSVVUG00000009010	APEX1	100	65.723	ENSELUG00000021706	apex1	100	66.562	Esox_lucius
ENSVVUG00000009010	APEX1	100	95.283	ENSFCAG00000030869	APEX1	100	95.283	Felis_catus
ENSVVUG00000009010	APEX1	100	92.453	ENSFDAG00000006120	APEX1	100	92.453	Fukomys_damarensis
ENSVVUG00000009010	APEX1	99	67.405	ENSFHEG00000009031	apex1	83	67.405	Fundulus_heteroclitus
ENSVVUG00000009010	APEX1	99	62.658	ENSGMOG00000007943	apex1	99	62.658	Gadus_morhua
ENSVVUG00000009010	APEX1	99	67.089	ENSGAFG00000005311	apex1	99	67.089	Gambusia_affinis
ENSVVUG00000009010	APEX1	99	65.931	ENSGACG00000019497	apex1	99	69.173	Gasterosteus_aculeatus
ENSVVUG00000009010	APEX1	100	70.219	ENSGAGG00000014999	APEX1	100	70.219	Gopherus_agassizii
ENSVVUG00000009010	APEX1	100	94.654	ENSGGOG00000002128	APEX1	100	94.654	Gorilla_gorilla
ENSVVUG00000009010	APEX1	99	66.139	ENSHBUG00000005894	apex1	99	66.772	Haplochromis_burtoni
ENSVVUG00000009010	APEX1	100	93.396	ENSHGLG00000002848	APEX1	100	93.396	Heterocephalus_glaber_female
ENSVVUG00000009010	APEX1	100	93.396	ENSHGLG00100017878	APEX1	100	93.396	Heterocephalus_glaber_male
ENSVVUG00000009010	APEX1	99	66.458	ENSHCOG00000009961	apex1	99	66.772	Hippocampus_comes
ENSVVUG00000009010	APEX1	100	67.398	ENSIPUG00000005799	apex1	100	67.085	Ictalurus_punctatus
ENSVVUG00000009010	APEX1	100	94.025	ENSSTOG00000010096	APEX1	100	94.025	Ictidomys_tridecemlineatus
ENSVVUG00000009010	APEX1	100	92.453	ENSJJAG00000012067	-	100	92.453	Jaculus_jaculus
ENSVVUG00000009010	APEX1	100	83.019	ENSJJAG00000003660	-	100	83.019	Jaculus_jaculus
ENSVVUG00000009010	APEX1	94	84.564	ENSJJAG00000020465	-	96	84.564	Jaculus_jaculus
ENSVVUG00000009010	APEX1	99	65.823	ENSKMAG00000021171	apex1	99	65.823	Kryptolebias_marmoratus
ENSVVUG00000009010	APEX1	99	64.353	ENSLBEG00000010248	apex1	99	64.353	Labrus_bergylta
ENSVVUG00000009010	APEX1	100	66.875	ENSLACG00000008617	APEX1	100	65.938	Latimeria_chalumnae
ENSVVUG00000009010	APEX1	100	66.770	ENSLOCG00000015516	apex1	99	66.770	Lepisosteus_oculatus
ENSVVUG00000009010	APEX1	100	92.767	ENSLAFG00000021872	APEX1	100	92.767	Loxodonta_africana
ENSVVUG00000009010	APEX1	100	94.025	ENSMFAG00000002565	APEX1	100	94.025	Macaca_fascicularis
ENSVVUG00000009010	APEX1	100	94.025	ENSMMUG00000048039	APEX1	100	94.025	Macaca_mulatta
ENSVVUG00000009010	APEX1	100	94.025	ENSMNEG00000036944	APEX1	100	94.025	Macaca_nemestrina
ENSVVUG00000009010	APEX1	100	94.340	ENSMLEG00000042125	APEX1	100	94.340	Mandrillus_leucophaeus
ENSVVUG00000009010	APEX1	99	67.192	ENSMAMG00000023526	apex1	99	66.877	Mastacembelus_armatus
ENSVVUG00000009010	APEX1	86	71.273	ENSMZEG00005014187	apex1	99	66.139	Maylandia_zebra
ENSVVUG00000009010	APEX1	100	92.453	ENSMAUG00000013994	Apex1	100	92.453	Mesocricetus_auratus
ENSVVUG00000009010	APEX1	100	95.912	ENSMICG00000043554	APEX1	100	95.912	Microcebus_murinus
ENSVVUG00000009010	APEX1	100	92.453	ENSMOCG00000013721	Apex1	100	92.453	Microtus_ochrogaster
ENSVVUG00000009010	APEX1	99	63.636	ENSMMOG00000010031	apex1	97	62.696	Mola_mola
ENSVVUG00000009010	APEX1	100	84.062	ENSMODG00000007125	APEX1	100	83.642	Monodelphis_domestica
ENSVVUG00000009010	APEX1	88	64.158	ENSMALG00000011699	apex1	75	64.158	Monopterus_albus
ENSVVUG00000009010	APEX1	99	94.953	MGP_CAROLIEiJ_G0019209	Apex1	99	94.953	Mus_caroli
ENSVVUG00000009010	APEX1	100	95.597	ENSMUSG00000035960	Apex1	100	95.597	Mus_musculus
ENSVVUG00000009010	APEX1	100	95.597	MGP_PahariEiJ_G0030232	Apex1	100	95.597	Mus_pahari
ENSVVUG00000009010	APEX1	100	95.597	MGP_SPRETEiJ_G0020101	Apex1	100	95.597	Mus_spretus
ENSVVUG00000009010	APEX1	100	93.438	ENSMLUG00000028957	APEX1	100	93.438	Myotis_lucifugus
ENSVVUG00000009010	APEX1	100	93.711	ENSNGAG00000002725	-	100	93.711	Nannospalax_galili
ENSVVUG00000009010	APEX1	100	70.440	ENSNGAG00000021748	-	99	70.440	Nannospalax_galili
ENSVVUG00000009010	APEX1	86	70.909	ENSNBRG00000005334	apex1	91	65.823	Neolamprologus_brichardi
ENSVVUG00000009010	APEX1	100	94.969	ENSNLEG00000010839	APEX1	100	94.969	Nomascus_leucogenys
ENSVVUG00000009010	APEX1	100	86.478	ENSMEUG00000014519	APEX1	100	85.266	Notamacropus_eugenii
ENSVVUG00000009010	APEX1	100	93.082	ENSOPRG00000014029	APEX1	100	92.767	Ochotona_princeps
ENSVVUG00000009010	APEX1	97	75.081	ENSODEG00000004777	-	99	75.081	Octodon_degus
ENSVVUG00000009010	APEX1	100	70.370	ENSODEG00000006583	-	100	70.370	Octodon_degus
ENSVVUG00000009010	APEX1	100	93.711	ENSODEG00000001703	-	100	93.711	Octodon_degus
ENSVVUG00000009010	APEX1	87	71.223	ENSONIG00000012089	apex1	99	66.456	Oreochromis_niloticus
ENSVVUG00000009010	APEX1	90	82.807	ENSOANG00000008836	APEX1	80	78.704	Ornithorhynchus_anatinus
ENSVVUG00000009010	APEX1	100	95.283	ENSOCUG00000005022	APEX1	100	95.283	Oryctolagus_cuniculus
ENSVVUG00000009010	APEX1	99	67.610	ENSORLG00000012378	apex1	99	67.610	Oryzias_latipes
ENSVVUG00000009010	APEX1	99	67.610	ENSORLG00020021371	apex1	99	67.610	Oryzias_latipes_hni
ENSVVUG00000009010	APEX1	99	67.610	ENSORLG00015020089	apex1	99	67.610	Oryzias_latipes_hsok
ENSVVUG00000009010	APEX1	99	66.667	ENSOMEG00000018876	apex1	99	66.667	Oryzias_melastigma
ENSVVUG00000009010	APEX1	100	94.654	ENSOGAG00000013335	-	100	94.654	Otolemur_garnettii
ENSVVUG00000009010	APEX1	98	84.295	ENSOGAG00000029355	-	100	84.295	Otolemur_garnettii
ENSVVUG00000009010	APEX1	97	88.636	ENSOARG00000001876	-	100	88.636	Ovis_aries
ENSVVUG00000009010	APEX1	99	77.848	ENSOARG00000014424	-	100	77.848	Ovis_aries
ENSVVUG00000009010	APEX1	100	92.138	ENSOARG00000019740	-	100	92.138	Ovis_aries
ENSVVUG00000009010	APEX1	100	94.969	ENSPPAG00000038760	APEX1	100	94.969	Pan_paniscus
ENSVVUG00000009010	APEX1	100	95.597	ENSPPRG00000011794	APEX1	100	95.597	Panthera_pardus
ENSVVUG00000009010	APEX1	100	95.283	ENSPTIG00000014829	APEX1	100	95.283	Panthera_tigris_altaica
ENSVVUG00000009010	APEX1	100	94.969	ENSPTRG00000006093	APEX1	100	94.969	Pan_troglodytes
ENSVVUG00000009010	APEX1	100	94.340	ENSPANG00000022757	APEX1	100	94.340	Papio_anubis
ENSVVUG00000009010	APEX1	87	69.675	ENSPKIG00000003504	apex1	100	66.149	Paramormyrops_kingsleyae
ENSVVUG00000009010	APEX1	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSVVUG00000009010	APEX1	100	94.654	ENSPEMG00000019097	Apex1	100	94.654	Peromyscus_maniculatus_bairdii
ENSVVUG00000009010	APEX1	94	65.667	ENSPMAG00000007275	-	95	68.327	Petromyzon_marinus
ENSVVUG00000009010	APEX1	100	84.013	ENSPCIG00000023274	APEX1	100	84.639	Phascolarctos_cinereus
ENSVVUG00000009010	APEX1	88	72.401	ENSPFOG00000004178	apex1	99	67.089	Poecilia_formosa
ENSVVUG00000009010	APEX1	99	67.508	ENSPLAG00000012779	apex1	99	67.508	Poecilia_latipinna
ENSVVUG00000009010	APEX1	88	72.401	ENSPMEG00000019623	apex1	99	67.089	Poecilia_mexicana
ENSVVUG00000009010	APEX1	88	72.043	ENSPREG00000014298	apex1	99	66.772	Poecilia_reticulata
ENSVVUG00000009010	APEX1	100	94.025	ENSPPYG00000005565	APEX1	100	94.025	Pongo_abelii
ENSVVUG00000009010	APEX1	100	91.195	ENSPCAG00000010376	APEX1	100	91.195	Procavia_capensis
ENSVVUG00000009010	APEX1	100	95.912	ENSPCOG00000021564	APEX1	100	95.912	Propithecus_coquereli
ENSVVUG00000009010	APEX1	100	94.062	ENSPVAG00000010736	APEX1	100	94.062	Pteropus_vampyrus
ENSVVUG00000009010	APEX1	86	71.273	ENSPNYG00000023940	apex1	99	66.139	Pundamilia_nyererei
ENSVVUG00000009010	APEX1	93	64.865	ENSPNAG00000020897	apex1	96	64.746	Pygocentrus_nattereri
ENSVVUG00000009010	APEX1	100	94.654	ENSRNOG00000009663	Apex1	100	94.654	Rattus_norvegicus
ENSVVUG00000009010	APEX1	100	94.340	ENSRBIG00000038325	APEX1	99	94.340	Rhinopithecus_bieti
ENSVVUG00000009010	APEX1	100	81.447	ENSSBOG00000031372	-	100	79.560	Saimiri_boliviensis_boliviensis
ENSVVUG00000009010	APEX1	100	95.597	ENSSBOG00000018921	-	100	95.597	Saimiri_boliviensis_boliviensis
ENSVVUG00000009010	APEX1	100	83.025	ENSSHAG00000013524	APEX1	100	83.025	Sarcophilus_harrisii
ENSVVUG00000009010	APEX1	100	63.208	ENSSFOG00015001948	apex1	100	63.208	Scleropages_formosus
ENSVVUG00000009010	APEX1	87	69.065	ENSSMAG00000013348	apex1	99	64.557	Scophthalmus_maximus
ENSVVUG00000009010	APEX1	99	65.506	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSVVUG00000009010	APEX1	99	65.823	ENSSLDG00000023005	apex1	99	65.823	Seriola_lalandi_dorsalis
ENSVVUG00000009010	APEX1	90	72.982	ENSSPUG00000000531	APEX1	95	72.887	Sphenodon_punctatus
ENSVVUG00000009010	APEX1	99	65.506	ENSSPAG00000000458	apex1	99	65.506	Stegastes_partitus
ENSVVUG00000009010	APEX1	100	94.654	ENSSSCG00000040060	-	100	94.654	Sus_scrofa
ENSVVUG00000009010	APEX1	93	59.272	ENSSSCG00000039705	-	92	59.859	Sus_scrofa
ENSVVUG00000009010	APEX1	74	60.169	ENSTGUG00000014378	APEX1	100	60.169	Taeniopygia_guttata
ENSVVUG00000009010	APEX1	87	67.266	ENSTRUG00000004268	apex1	95	63.291	Takifugu_rubripes
ENSVVUG00000009010	APEX1	99	63.924	ENSTNIG00000005778	apex1	99	63.291	Tetraodon_nigroviridis
ENSVVUG00000009010	APEX1	100	90.881	ENSTBEG00000006405	APEX1	100	90.881	Tupaia_belangeri
ENSVVUG00000009010	APEX1	74	95.339	ENSTTRG00000007860	APEX1	100	95.339	Tursiops_truncatus
ENSVVUG00000009010	APEX1	100	95.283	ENSUAMG00000010457	APEX1	100	95.283	Ursus_americanus
ENSVVUG00000009010	APEX1	100	95.283	ENSUMAG00000009178	APEX1	100	95.283	Ursus_maritimus
ENSVVUG00000009010	APEX1	74	91.102	ENSVPAG00000005083	APEX1	100	91.102	Vicugna_pacos
ENSVVUG00000009010	APEX1	100	65.831	ENSXETG00000024773	apex1	100	65.831	Xenopus_tropicalis
ENSVVUG00000009010	APEX1	99	67.722	ENSXCOG00000015233	apex1	99	67.722	Xiphophorus_couchianus
ENSVVUG00000009010	APEX1	100	66.981	ENSXMAG00000006195	apex1	99	67.722	Xiphophorus_maculatus