EuRBPDB

Description
Ensembl ID
ENSVVUG00000009890 (Gene tree)
Gene ID
-
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Vulpes_vulpes
Status
putative
Strand
Minus strand
Length
28802 bases
Position
chrNBDQ01000017.1:19306206-19335007
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSVVUP00000013458CSDPF00313.226e-6914
ENSVVUP00000013458CSDPF00313.226e-6924
ENSVVUP00000013458CSDPF00313.226e-6934
ENSVVUP00000013458CSDPF00313.226e-6944
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSVVUT00000017652CSDE1-2012588-ENSVVUP00000013458731 (aa)--
Gene Model
Protein-Protein Interaction (PPI)
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSVVUG00000009890CSDE19499.269ENSG00000009307CSDE1100100.000Homo_sapiens
ENSVVUG00000009890CSDE19474.504ENSAPOG00000015538csde19374.085Acanthochromis_polyacanthus
ENSVVUG00000009890CSDE19494.298ENSAMEG00000017129CSDE18594.298Ailuropoda_melanoleuca
ENSVVUG00000009890CSDE17477.027ENSACIG00000015175csde110077.027Amphilophus_citrinellus
ENSVVUG00000009890CSDE19474.646ENSAOCG00000011510csde19373.654Amphiprion_ocellaris
ENSVVUG00000009890CSDE19476.710ENSAPEG00000007194csde19374.646Amphiprion_percula
ENSVVUG00000009890CSDE19472.926ENSATEG00000003864csde19372.926Anabas_testudineus
ENSVVUG00000009890CSDE19487.427ENSAPLG00000008797CSDE19087.427Anas_platyrhynchos
ENSVVUG00000009890CSDE19491.667ENSACAG00000003120CSDE19091.667Anolis_carolinensis
ENSVVUG00000009890CSDE16273.810ENSANAG00000028396-8973.810Aotus_nancymaae
ENSVVUG00000009890CSDE19498.830ENSANAG00000024665CSDE19293.706Aotus_nancymaae
ENSVVUG00000009890CSDE19475.948ENSACLG00000013296csde19375.948Astatotilapia_calliptera
ENSVVUG00000009890CSDE19472.965ENSAMXG00000007436csde19372.965Astyanax_mexicanus
ENSVVUG00000009890CSDE19498.538ENSBTAG00000000678CSDE18698.538Bos_taurus
ENSVVUG00000009890CSDE19498.977ENSCJAG00000012565CSDE18698.977Callithrix_jacchus
ENSVVUG00000009890CSDE19495.468ENSCAFG00000009618CSDE18995.468Canis_familiaris
ENSVVUG00000009890CSDE19495.468ENSCAFG00020000481CSDE19395.468Canis_lupus_dingo
ENSVVUG00000009890CSDE19498.538ENSCHIG00000017250CSDE18698.538Capra_hircus
ENSVVUG00000009890CSDE19498.392ENSTSYG00000003747CSDE19098.392Carlito_syrichta
ENSVVUG00000009890CSDE19491.813ENSCAPG00000015128CSDE19291.813Cavia_aperea
ENSVVUG00000009890CSDE19492.398ENSCPOG00000040388CSDE19092.398Cavia_porcellus
ENSVVUG00000009890CSDE19498.977ENSCCAG00000036794CSDE19098.977Cebus_capucinus
ENSVVUG00000009890CSDE19179.479ENSCCAG00000033677-9678.704Cebus_capucinus
ENSVVUG00000009890CSDE19077.015ENSCCAG00000030878-7977.015Cebus_capucinus
ENSVVUG00000009890CSDE19499.269ENSCATG00000036962CSDE18699.269Cercocebus_atys
ENSVVUG00000009890CSDE19498.684ENSCLAG00000006618CSDE19098.684Chinchilla_lanigera
ENSVVUG00000009890CSDE19499.269ENSCSAG00000001658CSDE18699.269Chlorocebus_sabaeus
ENSVVUG00000009890CSDE192100.000ENSCHOG00000000918CSDE170100.000Choloepus_hoffmanni
ENSVVUG00000009890CSDE19491.959ENSCPBG00000016547CSDE19091.959Chrysemys_picta_bellii
ENSVVUG00000009890CSDE19242.411ENSCING00000014465-9142.411Ciona_intestinalis
ENSVVUG00000009890CSDE19241.193ENSCSAVG00000008100-9441.193Ciona_savignyi
ENSVVUG00000009890CSDE19499.269ENSCANG00000035096CSDE18699.269Colobus_angolensis_palliatus
ENSVVUG00000009890CSDE19195.849ENSCANG00000031069-9395.849Colobus_angolensis_palliatus
ENSVVUG00000009890CSDE19498.392ENSCGRG00001016833-9098.392Cricetulus_griseus_chok1gshd
ENSVVUG00000009890CSDE19377.467ENSCGRG00001014011-9377.467Cricetulus_griseus_chok1gshd
ENSVVUG00000009890CSDE19374.713ENSCGRG00000005831-9274.713Cricetulus_griseus_crigri
ENSVVUG00000009890CSDE19097.910ENSCGRG00000002225-8397.910Cricetulus_griseus_crigri
ENSVVUG00000009890CSDE19474.610ENSCSEG00000002620csde19073.469Cynoglossus_semilaevis
ENSVVUG00000009890CSDE19475.802ENSCVAG00000001344csde19375.398Cyprinodon_variegatus
ENSVVUG00000009890CSDE19477.001ENSDARG00000074758csde110077.500Danio_rerio
ENSVVUG00000009890CSDE19494.161ENSDNOG00000010287-8694.161Dasypus_novemcinctus
ENSVVUG00000009890CSDE19497.661ENSDORG00000011609Csde19097.661Dipodomys_ordii
ENSVVUG00000009890CSDE19049.184FBgn0263352Unr7148.594Drosophila_melanogaster
ENSVVUG00000009890CSDE19498.347ENSETEG00000002491-6798.347Echinops_telfairi
ENSVVUG00000009890CSDE19373.792ENSETEG00000013678-8573.792Echinops_telfairi
ENSVVUG00000009890CSDE19183.107ENSETEG00000006280-10083.107Echinops_telfairi
ENSVVUG00000009890CSDE16668.672ENSETEG00000007109-8168.672Echinops_telfairi
ENSVVUG00000009890CSDE19455.603ENSEBUG00000008647csde19453.625Eptatretus_burgeri
ENSVVUG00000009890CSDE19499.123ENSEASG00005006284CSDE19099.123Equus_asinus_asinus
ENSVVUG00000009890CSDE19499.123ENSECAG00000020885CSDE19099.123Equus_caballus
ENSVVUG00000009890CSDE19499.270ENSEEUG00000006286CSDE16699.270Erinaceus_europaeus
ENSVVUG00000009890CSDE19472.829ENSELUG00000015507csde19371.449Esox_lucius
ENSVVUG00000009890CSDE19499.708ENSFCAG00000029266CSDE19395.175Felis_catus
ENSVVUG00000009890CSDE19491.520ENSFALG00000003407CSDE19091.520Ficedula_albicollis
ENSVVUG00000009890CSDE19498.977ENSFDAG00000007882CSDE19199.091Fukomys_damarensis
ENSVVUG00000009890CSDE19475.837ENSFHEG00000010799csde19375.837Fundulus_heteroclitus
ENSVVUG00000009890CSDE19476.239ENSGMOG00000012731csde19376.239Gadus_morhua
ENSVVUG00000009890CSDE19491.959ENSGALG00000002139CSDE19191.959Gallus_gallus
ENSVVUG00000009890CSDE19473.256ENSGAFG00000005241csde19573.256Gambusia_affinis
ENSVVUG00000009890CSDE19476.856ENSGACG00000004544csde19376.856Gasterosteus_aculeatus
ENSVVUG00000009890CSDE19491.520ENSGAGG00000017685CSDE19091.520Gopherus_agassizii
ENSVVUG00000009890CSDE19499.269ENSGGOG00000002164CSDE19394.737Gorilla_gorilla
ENSVVUG00000009890CSDE19475.217ENSHBUG00000020315csde19372.886Haplochromis_burtoni
ENSVVUG00000009890CSDE19481.579ENSHGLG00000019549-9081.579Heterocephalus_glaber_female
ENSVVUG00000009890CSDE19477.924ENSHGLG00000000650-8377.924Heterocephalus_glaber_female
ENSVVUG00000009890CSDE19484.357ENSHGLG00000003829-9384.357Heterocephalus_glaber_female
ENSVVUG00000009890CSDE19390.909ENSHGLG00000008555-9390.909Heterocephalus_glaber_female
ENSVVUG00000009890CSDE18793.407ENSHGLG00000009620-8193.407Heterocephalus_glaber_female
ENSVVUG00000009890CSDE19094.627ENSHGLG00000010039-8694.627Heterocephalus_glaber_female
ENSVVUG00000009890CSDE19483.187ENSHGLG00000007471-9083.187Heterocephalus_glaber_female
ENSVVUG00000009890CSDE19481.140ENSHGLG00100012072-9382.840Heterocephalus_glaber_male
ENSVVUG00000009890CSDE19081.493ENSHGLG00100004833-8281.493Heterocephalus_glaber_male
ENSVVUG00000009890CSDE19480.117ENSHGLG00100007287-8580.117Heterocephalus_glaber_male
ENSVVUG00000009890CSDE19479.240ENSHGLG00100004195-9979.240Heterocephalus_glaber_male
ENSVVUG00000009890CSDE19094.328ENSHGLG00100006910-8694.328Heterocephalus_glaber_male
ENSVVUG00000009890CSDE19482.799ENSHGLG00100002245-8482.799Heterocephalus_glaber_male
ENSVVUG00000009890CSDE19499.123ENSHGLG00100019438-9099.123Heterocephalus_glaber_male
ENSVVUG00000009890CSDE19475.731ENSHGLG00100001846-9875.731Heterocephalus_glaber_male
ENSVVUG00000009890CSDE19475.073ENSHCOG00000004158csde19372.012Hippocampus_comes
ENSVVUG00000009890CSDE19472.529ENSIPUG00000000355csde19372.529Ictalurus_punctatus
ENSVVUG00000009890CSDE19478.035ENSSTOG00000030994-9078.035Ictidomys_tridecemlineatus
ENSVVUG00000009890CSDE19482.460ENSSTOG00000032722-9882.460Ictidomys_tridecemlineatus
ENSVVUG00000009890CSDE19498.246ENSJJAG00000019571Csde19098.246Jaculus_jaculus
ENSVVUG00000009890CSDE19475.832ENSKMAG00000005685csde19175.396Kryptolebias_marmoratus
ENSVVUG00000009890CSDE19474.221ENSLBEG00000014770csde19373.217Labrus_bergylta
ENSVVUG00000009890CSDE19081.420ENSLACG00000018452CSDE18079.300Latimeria_chalumnae
ENSVVUG00000009890CSDE19479.270ENSLOCG00000010413csde18779.270Lepisosteus_oculatus
ENSVVUG00000009890CSDE19493.421ENSLAFG00000007150CSDE18693.421Loxodonta_africana
ENSVVUG00000009890CSDE19499.269ENSMFAG00000003674CSDE19394.737Macaca_fascicularis
ENSVVUG00000009890CSDE19499.269ENSMMUG00000001974CSDE19994.737Macaca_mulatta
ENSVVUG00000009890CSDE19499.269ENSMNEG00000045247CSDE18699.269Macaca_nemestrina
ENSVVUG00000009890CSDE19499.269ENSMLEG00000038673CSDE18699.269Mandrillus_leucophaeus
ENSVVUG00000009890CSDE19475.354ENSMAMG00000008821csde19374.236Mastacembelus_armatus
ENSVVUG00000009890CSDE19475.948ENSMZEG00005021675csde19372.886Maylandia_zebra
ENSVVUG00000009890CSDE19491.813ENSMGAG00000016381CSDE19191.813Meleagris_gallopavo
ENSVVUG00000009890CSDE19498.392ENSMAUG00000014031Csde19098.392Mesocricetus_auratus
ENSVVUG00000009890CSDE19498.099ENSMICG00000002050CSDE18798.204Microcebus_murinus
ENSVVUG00000009890CSDE19498.392ENSMOCG00000018960Csde19098.392Microtus_ochrogaster
ENSVVUG00000009890CSDE19473.654ENSMMOG00000015075csde19373.654Mola_mola
ENSVVUG00000009890CSDE19495.468ENSMODG00000004685CSDE19095.468Monodelphis_domestica
ENSVVUG00000009890CSDE19473.508ENSMALG00000007132csde19373.508Monopterus_albus
ENSVVUG00000009890CSDE19498.099MGP_CAROLIEiJ_G0025444Csde19797.945Mus_caroli
ENSVVUG00000009890CSDE19498.246ENSMUSG00000068823Csde19797.945Mus_musculus
ENSVVUG00000009890CSDE19498.392MGP_PahariEiJ_G0026888Csde19797.945Mus_pahari
ENSVVUG00000009890CSDE19498.392MGP_SPRETEiJ_G0026394Csde19797.945Mus_spretus
ENSVVUG00000009890CSDE19499.708ENSMPUG00000005753CSDE19299.708Mustela_putorius_furo
ENSVVUG00000009890CSDE19493.567ENSMLUG00000005681CSDE18793.567Myotis_lucifugus
ENSVVUG00000009890CSDE19071.045ENSNGAG00000012599-8271.045Nannospalax_galili
ENSVVUG00000009890CSDE19498.538ENSNGAG00000021929Csde19098.538Nannospalax_galili
ENSVVUG00000009890CSDE19472.886ENSNBRG00000020808csde19372.886Neolamprologus_brichardi
ENSVVUG00000009890CSDE19499.123ENSNLEG00000004842CSDE18699.123Nomascus_leucogenys
ENSVVUG00000009890CSDE19497.087ENSMEUG00000002677CSDE19097.087Notamacropus_eugenii
ENSVVUG00000009890CSDE19499.029ENSOPRG00000005002CSDE17199.029Ochotona_princeps
ENSVVUG00000009890CSDE19067.160ENSODEG00000005979-7367.160Octodon_degus
ENSVVUG00000009890CSDE19498.246ENSODEG00000007383-9198.364Octodon_degus
ENSVVUG00000009890CSDE19473.901ENSONIG00000009309csde19373.901Oreochromis_niloticus
ENSVVUG00000009890CSDE18293.970ENSOANG00000003346-7693.970Ornithorhynchus_anatinus
ENSVVUG00000009890CSDE19498.538ENSOCUG00000016438CSDE18698.538Oryctolagus_cuniculus
ENSVVUG00000009890CSDE19474.184ENSORLG00000000707csde19374.184Oryzias_latipes
ENSVVUG00000009890CSDE19476.093ENSORLG00020005148csde19374.043Oryzias_latipes_hni
ENSVVUG00000009890CSDE19476.239ENSORLG00015019415csde19374.184Oryzias_latipes_hsok
ENSVVUG00000009890CSDE19476.856ENSOMEG00000015656csde19374.788Oryzias_melastigma
ENSVVUG00000009890CSDE19494.591ENSOGAG00000012127CSDE18794.591Otolemur_garnettii
ENSVVUG00000009890CSDE19494.152ENSOARG00000020034CSDE18594.152Ovis_aries
ENSVVUG00000009890CSDE19499.269ENSPPAG00000025861CSDE19394.737Pan_paniscus
ENSVVUG00000009890CSDE19499.708ENSPPRG00000006747CSDE18699.708Panthera_pardus
ENSVVUG00000009890CSDE19499.708ENSPTIG00000015468CSDE19099.708Panthera_tigris_altaica
ENSVVUG00000009890CSDE19499.269ENSPTRG00000033721CSDE19099.269Pan_troglodytes
ENSVVUG00000009890CSDE19499.269ENSPANG00000018873CSDE19394.737Papio_anubis
ENSVVUG00000009890CSDE19472.449ENSPKIG00000009459csde19372.449Paramormyrops_kingsleyae
ENSVVUG00000009890CSDE17995.575ENSPSIG00000003823CSDE19695.575Pelodiscus_sinensis
ENSVVUG00000009890CSDE19373.032ENSPMGG00000000772csde19373.032Periophthalmus_magnuspinnatus
ENSVVUG00000009890CSDE19498.246ENSPEMG00000020357-9098.246Peromyscus_maniculatus_bairdii
ENSVVUG00000009890CSDE19495.614ENSPCIG00000022587CSDE19095.614Phascolarctos_cinereus
ENSVVUG00000009890CSDE19374.872ENSPFOG00000012664csde19274.872Poecilia_formosa
ENSVVUG00000009890CSDE19368.535ENSPLAG00000017680csde18768.535Poecilia_latipinna
ENSVVUG00000009890CSDE19368.897ENSPMEG00000005094csde18668.897Poecilia_mexicana
ENSVVUG00000009890CSDE19475.253ENSPREG00000011631csde19172.601Poecilia_reticulata
ENSVVUG00000009890CSDE19499.123ENSPPYG00000000996CSDE19099.123Pongo_abelii
ENSVVUG00000009890CSDE194100.000ENSPCAG00000014368CSDE183100.000Procavia_capensis
ENSVVUG00000009890CSDE19498.830ENSPCOG00000017893CSDE19098.830Propithecus_coquereli
ENSVVUG00000009890CSDE17883.955ENSPCOG00000008223-8983.955Propithecus_coquereli
ENSVVUG00000009890CSDE19494.152ENSPVAG00000008225CSDE18794.152Pteropus_vampyrus
ENSVVUG00000009890CSDE19475.217ENSPNYG00000013745csde19372.886Pundamilia_nyererei
ENSVVUG00000009890CSDE19476.856ENSPNAG00000001958csde19373.799Pygocentrus_nattereri
ENSVVUG00000009890CSDE19498.246ENSRNOG00000061058Csde19098.246Rattus_norvegicus
ENSVVUG00000009890CSDE19495.175ENSRBIG00000038088-9195.082Rhinopithecus_bieti
ENSVVUG00000009890CSDE19493.869ENSRBIG00000038966-8593.869Rhinopithecus_bieti
ENSVVUG00000009890CSDE19499.269ENSRROG00000043101CSDE18699.269Rhinopithecus_roxellana
ENSVVUG00000009890CSDE19498.977ENSSBOG00000035592CSDE18698.977Saimiri_boliviensis_boliviensis
ENSVVUG00000009890CSDE19490.936ENSSHAG00000009831CSDE19090.936Sarcophilus_harrisii
ENSVVUG00000009890CSDE19475.072ENSSFOG00015007498csde19375.362Scleropages_formosus
ENSVVUG00000009890CSDE19474.788ENSSMAG00000007203csde19374.788Scophthalmus_maximus
ENSVVUG00000009890CSDE19474.504ENSSDUG00000015380csde19373.508Seriola_dumerili
ENSVVUG00000009890CSDE19476.565ENSSLDG00000008819csde19376.565Seriola_lalandi_dorsalis
ENSVVUG00000009890CSDE19492.982ENSSARG00000000738CSDE18792.982Sorex_araneus
ENSVVUG00000009890CSDE19491.813ENSSPUG00000008714CSDE19091.813Sphenodon_punctatus
ENSVVUG00000009890CSDE19476.419ENSSPAG00000000716csde19373.362Stegastes_partitus
ENSVVUG00000009890CSDE19499.123ENSSSCG00000006752CSDE19494.591Sus_scrofa
ENSVVUG00000009890CSDE19490.379ENSTGUG00000000972CSDE19090.379Taeniopygia_guttata
ENSVVUG00000009890CSDE19471.283ENSTRUG00000007996csde19371.283Takifugu_rubripes
ENSVVUG00000009890CSDE17981.369ENSTNIG00000010878csde110081.369Tetraodon_nigroviridis
ENSVVUG00000009890CSDE19494.006ENSTTRG00000015583CSDE18794.006Tursiops_truncatus
ENSVVUG00000009890CSDE191100.000ENSUAMG00000021779-99100.000Ursus_americanus
ENSVVUG00000009890CSDE19390.224ENSUAMG00000024289-9990.224Ursus_americanus
ENSVVUG00000009890CSDE19199.349ENSUMAG00000011714-8599.349Ursus_maritimus
ENSVVUG00000009890CSDE19488.889ENSUMAG00000009720-9288.889Ursus_maritimus
ENSVVUG00000009890CSDE19497.980ENSVPAG00000000749CSDE16597.980Vicugna_pacos
ENSVVUG00000009890CSDE19485.444ENSXETG00000021448csde19185.444Xenopus_tropicalis
ENSVVUG00000009890CSDE17975.764ENSXCOG00000000035csde17675.764Xiphophorus_couchianus
ENSVVUG00000009890CSDE19476.565ENSXMAG00000009080csde19374.085Xiphophorus_maculatus