EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000010086 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 859 bases
Position: chrNBDQ01000001.1:49008043-49008901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000013765	LSM	PF01423.22	9.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000018036	-	618	-	ENSVVUP00000013765	205 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000010086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000010086's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000010086	-	93	76.995	ENSVVUG00000017971	SNRPN	92	75.771
ENSVVUG00000010086	-	85	81.122	ENSVVUG00000025654	-	100	76.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000010086	-	85	81.122	ENSG00000125835	SNRPB	97	79.736	Homo_sapiens
ENSVVUG00000010086	-	95	74.194	ENSAPOG00000019606	snrpb	79	72.222	Acanthochromis_polyacanthus
ENSVVUG00000010086	-	84	81.026	ENSAMEG00000011353	SNRPB	98	76.569	Ailuropoda_melanoleuca
ENSVVUG00000010086	-	75	73.714	ENSACIG00000014480	snrpb	97	73.991	Amphilophus_citrinellus
ENSVVUG00000010086	-	95	63.229	ENSAOCG00000006876	snrpb	96	72.222	Amphiprion_ocellaris
ENSVVUG00000010086	-	95	63.229	ENSAPEG00000021585	snrpb	96	74.672	Amphiprion_percula
ENSVVUG00000010086	-	78	75.138	ENSATEG00000009836	snrpb	96	73.077	Anabas_testudineus
ENSVVUG00000010086	-	81	77.660	ENSACAG00000002053	SNRPB	100	72.845	Anolis_carolinensis
ENSVVUG00000010086	-	94	76.744	ENSANAG00000036271	-	86	76.526	Aotus_nancymaae
ENSVVUG00000010086	-	85	81.122	ENSANAG00000024443	-	97	79.736	Aotus_nancymaae
ENSVVUG00000010086	-	94	75.701	ENSANAG00000020364	-	57	73.094	Aotus_nancymaae
ENSVVUG00000010086	-	95	63.229	ENSACLG00000014707	snrpb	96	72.222	Astatotilapia_calliptera
ENSVVUG00000010086	-	71	75.000	ENSAMXG00000029434	snrpb	100	72.083	Astyanax_mexicanus
ENSVVUG00000010086	-	85	80.612	ENSBTAG00000001038	SNRPB	97	79.295	Bos_taurus
ENSVVUG00000010086	-	94	75.701	ENSCJAG00000023097	-	96	73.913	Callithrix_jacchus
ENSVVUG00000010086	-	85	81.122	ENSCJAG00000020971	-	97	79.736	Callithrix_jacchus
ENSVVUG00000010086	-	85	81.122	ENSCAFG00000006693	-	97	79.736	Canis_familiaris
ENSVVUG00000010086	-	81	71.204	ENSCAFG00000031109	-	98	58.635	Canis_familiaris
ENSVVUG00000010086	-	85	81.122	ENSCAFG00020016981	-	100	76.667	Canis_lupus_dingo
ENSVVUG00000010086	-	85	80.612	ENSCHIG00000025449	-	97	79.295	Capra_hircus
ENSVVUG00000010086	-	85	81.122	ENSTSYG00000014498	-	97	79.736	Carlito_syrichta
ENSVVUG00000010086	-	95	65.700	ENSTSYG00000032303	-	80	64.734	Carlito_syrichta
ENSVVUG00000010086	-	84	81.026	ENSCAPG00000012669	SNRPB	97	79.646	Cavia_aperea
ENSVVUG00000010086	-	85	81.122	ENSCPOG00000039408	SNRPB	97	79.736	Cavia_porcellus
ENSVVUG00000010086	-	85	81.122	ENSCCAG00000026002	SNRPB	97	79.736	Cebus_capucinus
ENSVVUG00000010086	-	52	77.586	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSVVUG00000010086	-	85	81.122	ENSCATG00000030230	SNRPB	97	79.736	Cercocebus_atys
ENSVVUG00000010086	-	85	81.122	ENSCLAG00000012442	SNRPB	100	77.637	Chinchilla_lanigera
ENSVVUG00000010086	-	85	81.122	ENSCSAG00000010840	SNRPB	97	79.736	Chlorocebus_sabaeus
ENSVVUG00000010086	-	85	78.571	ENSCPBG00000026801	SNRPB	98	76.652	Chrysemys_picta_bellii
ENSVVUG00000010086	-	85	81.122	ENSCANG00000019461	SNRPB	97	79.736	Colobus_angolensis_palliatus
ENSVVUG00000010086	-	85	81.122	ENSCGRG00001023046	Snrpb	97	79.736	Cricetulus_griseus_chok1gshd
ENSVVUG00000010086	-	81	80.319	ENSCGRG00000010423	Snrpb	96	78.995	Cricetulus_griseus_crigri
ENSVVUG00000010086	-	78	74.725	ENSCSEG00000020328	snrpb	93	75.330	Cynoglossus_semilaevis
ENSVVUG00000010086	-	71	75.595	ENSDARG00000011125	snrpb	93	75.771	Danio_rerio
ENSVVUG00000010086	-	85	81.122	ENSDNOG00000015545	-	100	76.667	Dasypus_novemcinctus
ENSVVUG00000010086	-	85	78.571	ENSDNOG00000007896	-	99	74.583	Dasypus_novemcinctus
ENSVVUG00000010086	-	82	80.000	ENSDORG00000029558	Snrpb	95	78.733	Dipodomys_ordii
ENSVVUG00000010086	-	90	49.524	FBgn0262601	SmB	74	57.143	Drosophila_melanogaster
ENSVVUG00000010086	-	71	67.262	ENSETEG00000006830	SNRPB	99	68.722	Echinops_telfairi
ENSVVUG00000010086	-	78	63.441	ENSEBUG00000007467	SNRPB	62	70.470	Eptatretus_burgeri
ENSVVUG00000010086	-	85	80.612	ENSEASG00005012991	SNRPB	97	79.295	Equus_asinus_asinus
ENSVVUG00000010086	-	85	81.122	ENSECAG00000011944	SNRPB	97	79.736	Equus_caballus
ENSVVUG00000010086	-	85	81.122	ENSEEUG00000015568	SNRPB	79	79.736	Erinaceus_europaeus
ENSVVUG00000010086	-	60	75.862	ENSELUG00000014564	snrpb	100	71.667	Esox_lucius
ENSVVUG00000010086	-	85	81.122	ENSFCAG00000034090	-	97	79.736	Felis_catus
ENSVVUG00000010086	-	81	77.128	ENSFALG00000004866	SNRPB	100	72.414	Ficedula_albicollis
ENSVVUG00000010086	-	85	81.122	ENSFDAG00000009937	SNRPB	97	79.736	Fukomys_damarensis
ENSVVUG00000010086	-	85	78.061	ENSGALG00000035421	SNRPN	100	73.333	Gallus_gallus
ENSVVUG00000010086	-	73	75.000	ENSGAFG00000019558	snrpb	97	72.807	Gambusia_affinis
ENSVVUG00000010086	-	78	73.626	ENSGACG00000003262	snrpb	93	74.449	Gasterosteus_aculeatus
ENSVVUG00000010086	-	85	78.571	ENSGAGG00000001308	SNRPB	100	73.750	Gopherus_agassizii
ENSVVUG00000010086	-	85	81.122	ENSGGOG00000016138	SNRPB	97	79.736	Gorilla_gorilla
ENSVVUG00000010086	-	95	63.229	ENSHBUG00000008369	snrpb	96	72.222	Haplochromis_burtoni
ENSVVUG00000010086	-	62	76.190	ENSHGLG00000016505	-	86	72.067	Heterocephalus_glaber_female
ENSVVUG00000010086	-	85	81.122	ENSHGLG00000016241	-	97	79.736	Heterocephalus_glaber_female
ENSVVUG00000010086	-	62	76.190	ENSHGLG00100004178	-	86	72.067	Heterocephalus_glaber_male
ENSVVUG00000010086	-	85	81.122	ENSHGLG00100012877	-	97	79.736	Heterocephalus_glaber_male
ENSVVUG00000010086	-	78	74.725	ENSHCOG00000014888	snrpb	93	75.330	Hippocampus_comes
ENSVVUG00000010086	-	71	75.595	ENSIPUG00000024569	SNRPB	100	72.917	Ictalurus_punctatus
ENSVVUG00000010086	-	92	80.569	ENSSTOG00000033664	-	100	75.833	Ictidomys_tridecemlineatus
ENSVVUG00000010086	-	65	72.258	ENSSTOG00000027821	-	99	61.441	Ictidomys_tridecemlineatus
ENSVVUG00000010086	-	85	81.122	ENSJJAG00000024170	Snrpb	97	79.736	Jaculus_jaculus
ENSVVUG00000010086	-	74	76.301	ENSKMAG00000014494	snrpb	92	74.236	Kryptolebias_marmoratus
ENSVVUG00000010086	-	78	74.725	ENSLBEG00000005678	snrpb	93	75.330	Labrus_bergylta
ENSVVUG00000010086	-	85	75.510	ENSLACG00000011459	SNRPB	100	71.250	Latimeria_chalumnae
ENSVVUG00000010086	-	71	75.595	ENSLOCG00000002687	snrpb	100	72.917	Lepisosteus_oculatus
ENSVVUG00000010086	-	84	76.410	ENSLAFG00000017588	SNRPB	97	75.664	Loxodonta_africana
ENSVVUG00000010086	-	85	81.122	ENSMFAG00000038756	SNRPB	97	79.736	Macaca_fascicularis
ENSVVUG00000010086	-	85	81.122	ENSMMUG00000010050	SNRPB	97	79.736	Macaca_mulatta
ENSVVUG00000010086	-	85	81.122	ENSMNEG00000027954	SNRPB	97	79.736	Macaca_nemestrina
ENSVVUG00000010086	-	85	81.122	ENSMLEG00000022346	SNRPB	97	79.736	Mandrillus_leucophaeus
ENSVVUG00000010086	-	95	63.063	ENSMAMG00000009294	snrpb	93	72.103	Mastacembelus_armatus
ENSVVUG00000010086	-	95	63.229	ENSMZEG00005011856	snrpb	96	72.222	Maylandia_zebra
ENSVVUG00000010086	-	82	74.211	ENSMICG00000015983	-	95	75.362	Microcebus_murinus
ENSVVUG00000010086	-	85	80.612	ENSMICG00000016519	SNRPB	97	79.295	Microcebus_murinus
ENSVVUG00000010086	-	85	80.612	ENSMOCG00000002892	-	97	79.295	Microtus_ochrogaster
ENSVVUG00000010086	-	57	68.217	ENSMOCG00000021362	-	93	67.788	Microtus_ochrogaster
ENSVVUG00000010086	-	78	74.586	ENSMMOG00000013226	snrpb	95	75.221	Mola_mola
ENSVVUG00000010086	-	78	75.138	ENSMALG00000020839	snrpb	78	73.504	Monopterus_albus
ENSVVUG00000010086	-	85	81.122	MGP_CAROLIEiJ_G0024293	Snrpb	97	79.295	Mus_caroli
ENSVVUG00000010086	-	85	81.122	ENSMUSG00000027404	Snrpb	97	79.295	Mus_musculus
ENSVVUG00000010086	-	85	81.122	MGP_PahariEiJ_G0025738	Snrpb	97	79.295	Mus_pahari
ENSVVUG00000010086	-	85	81.122	MGP_SPRETEiJ_G0025213	Snrpb	97	79.295	Mus_spretus
ENSVVUG00000010086	-	85	81.122	ENSMPUG00000009283	SNRPB	97	79.736	Mustela_putorius_furo
ENSVVUG00000010086	-	85	80.628	ENSMLUG00000016951	SNRPB	100	76.596	Myotis_lucifugus
ENSVVUG00000010086	-	85	81.122	ENSNGAG00000012051	Snrpb	97	79.736	Nannospalax_galili
ENSVVUG00000010086	-	78	72.376	ENSNBRG00000006353	snrpb	86	72.489	Neolamprologus_brichardi
ENSVVUG00000010086	-	85	81.122	ENSNLEG00000029067	SNRPB	100	76.667	Nomascus_leucogenys
ENSVVUG00000010086	-	84	79.487	ENSMEUG00000015625	SNRPB	99	76.991	Notamacropus_eugenii
ENSVVUG00000010086	-	85	80.526	ENSODEG00000016060	-	100	77.056	Octodon_degus
ENSVVUG00000010086	-	85	81.122	ENSODEG00000004305	-	97	79.736	Octodon_degus
ENSVVUG00000010086	-	95	63.229	ENSONIG00000000248	snrpb	96	72.222	Oreochromis_niloticus
ENSVVUG00000010086	-	94	76.744	ENSOCUG00000021456	-	90	76.606	Oryctolagus_cuniculus
ENSVVUG00000010086	-	92	58.294	ENSOCUG00000026813	-	99	57.826	Oryctolagus_cuniculus
ENSVVUG00000010086	-	93	78.873	ENSOCUG00000028215	-	100	74.583	Oryctolagus_cuniculus
ENSVVUG00000010086	-	85	80.612	ENSOCUG00000014042	-	100	76.250	Oryctolagus_cuniculus
ENSVVUG00000010086	-	79	75.956	ENSOCUG00000022423	-	94	75.956	Oryctolagus_cuniculus
ENSVVUG00000010086	-	78	74.033	ENSORLG00000021862	snrpb	93	74.236	Oryzias_latipes
ENSVVUG00000010086	-	85	81.122	ENSOGAG00000016149	SNRPB	100	76.667	Otolemur_garnettii
ENSVVUG00000010086	-	85	80.612	ENSOARG00000006740	SNRPB	97	79.295	Ovis_aries
ENSVVUG00000010086	-	85	81.122	ENSPPAG00000036314	SNRPB	97	79.736	Pan_paniscus
ENSVVUG00000010086	-	85	81.122	ENSPPRG00000003233	-	97	79.736	Panthera_pardus
ENSVVUG00000010086	-	84	81.026	ENSPTIG00000007468	SNRPB	97	79.646	Panthera_tigris_altaica
ENSVVUG00000010086	-	85	81.122	ENSPTRG00000013176	SNRPB	97	79.736	Pan_troglodytes
ENSVVUG00000010086	-	85	81.122	ENSPANG00000020362	SNRPB	100	76.667	Papio_anubis
ENSVVUG00000010086	-	71	75.595	ENSPKIG00000002865	snrpb	100	72.500	Paramormyrops_kingsleyae
ENSVVUG00000010086	-	84	78.462	ENSPSIG00000014125	SNRPB	98	73.640	Pelodiscus_sinensis
ENSVVUG00000010086	-	76	72.881	ENSPMGG00000016349	snrpb	93	73.874	Periophthalmus_magnuspinnatus
ENSVVUG00000010086	-	85	81.122	ENSPEMG00000007948	Snrpb	97	79.736	Peromyscus_maniculatus_bairdii
ENSVVUG00000010086	-	84	80.000	ENSPCIG00000004694	SNRPB	99	74.895	Phascolarctos_cinereus
ENSVVUG00000010086	-	95	62.963	ENSPFOG00000011802	snrpb	96	66.953	Poecilia_formosa
ENSVVUG00000010086	-	92	56.872	ENSPLAG00000014130	snrpb	96	61.304	Poecilia_latipinna
ENSVVUG00000010086	-	55	74.815	ENSPREG00000015515	snrpb	62	74.815	Poecilia_reticulata
ENSVVUG00000010086	-	85	81.122	ENSPPYG00000010841	SNRPB	97	79.736	Pongo_abelii
ENSVVUG00000010086	-	85	81.122	ENSPCOG00000013686	SNRPB	97	79.736	Propithecus_coquereli
ENSVVUG00000010086	-	85	81.443	ENSPVAG00000017013	SNRPB	79	80.000	Pteropus_vampyrus
ENSVVUG00000010086	-	95	63.229	ENSPNYG00000014788	snrpb	96	72.222	Pundamilia_nyererei
ENSVVUG00000010086	-	71	75.595	ENSPNAG00000016126	snrpb	100	72.500	Pygocentrus_nattereri
ENSVVUG00000010086	-	85	81.122	ENSRNOG00000006961	Snrpb	97	79.736	Rattus_norvegicus
ENSVVUG00000010086	-	71	81.548	ENSRBIG00000040505	SNRPB	97	79.736	Rhinopithecus_bieti
ENSVVUG00000010086	-	85	81.122	ENSRROG00000036094	SNRPB	97	79.736	Rhinopithecus_roxellana
ENSVVUG00000010086	-	85	81.122	ENSSBOG00000027310	SNRPB	97	79.736	Saimiri_boliviensis_boliviensis
ENSVVUG00000010086	-	85	80.102	ENSSHAG00000010394	SNRPB	100	75.000	Sarcophilus_harrisii
ENSVVUG00000010086	-	71	75.000	ENSSFOG00015002870	snrpb	100	72.803	Scleropages_formosus
ENSVVUG00000010086	-	78	74.176	ENSSMAG00000006766	snrpb	93	74.890	Scophthalmus_maximus
ENSVVUG00000010086	-	95	63.229	ENSSDUG00000018539	snrpb	96	72.222	Seriola_dumerili
ENSVVUG00000010086	-	95	63.229	ENSSLDG00000022391	snrpb	96	72.222	Seriola_lalandi_dorsalis
ENSVVUG00000010086	-	84	73.846	ENSSARG00000003084	SNRPB	96	73.451	Sorex_araneus
ENSVVUG00000010086	-	84	78.462	ENSSPUG00000015659	SNRPB	100	73.640	Sphenodon_punctatus
ENSVVUG00000010086	-	95	63.229	ENSSPAG00000021992	snrpb	96	72.222	Stegastes_partitus
ENSVVUG00000010086	-	92	68.657	ENSSSCG00000011966	-	97	67.742	Sus_scrofa
ENSVVUG00000010086	-	85	80.612	ENSSSCG00000040857	-	97	79.295	Sus_scrofa
ENSVVUG00000010086	-	78	63.187	ENSTGUG00000005684	SNRPB	100	62.762	Taeniopygia_guttata
ENSVVUG00000010086	-	78	74.176	ENSTRUG00000023094	snrpb	97	74.890	Takifugu_rubripes
ENSVVUG00000010086	-	78	74.176	ENSTNIG00000002991	snrpb	93	74.890	Tetraodon_nigroviridis
ENSVVUG00000010086	-	71	81.548	ENSUAMG00000005984	-	88	80.328	Ursus_americanus
ENSVVUG00000010086	-	85	77.551	ENSXETG00000027266	snrpb	100	73.418	Xenopus_tropicalis
ENSVVUG00000010086	-	68	64.815	ENSXMAG00000028767	snrpb	62	71.528	Xiphophorus_maculatus