EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000010522 (Gene tree)
Gene ID: -
Gene Symbol: APOBEC1
Alias: APOBEC-1|BEDP|CDAR1|HEPR
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 12334 bases
Position: chrNBDQ01000019.1:18650197-18662530
Accession: 112917582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000014374	APOBEC_N	PF08210.11	1e-27	1	1
ENSVVUP00000014377	APOBEC_N	PF08210.11	1e-27	1	1
ENSVVUP00000014374	APOBEC_C	PF05240.14	6.5e-24	1	1
ENSVVUP00000014377	APOBEC_C	PF05240.14	6.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000018841	APOBEC1-201	1473	-	ENSVVUP00000014374	236 (aa)	XP_025851393	UPI000DF6B666
ENSVVUT00000018844	APOBEC1-202	1139	-	ENSVVUP00000014377	236 (aa)	XP_025851393	UPI000DF6B666

Gene Model

Click here to download ENSVVUG00000010522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000010522's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000010522	APOBEC1	100	78.814	ENSG00000111701	APOBEC1	100	78.814	Homo_sapiens
ENSVVUG00000010522	APOBEC1	99	87.983	ENSAMEG00000007098	APOBEC1	99	87.983	Ailuropoda_melanoleuca
ENSVVUG00000010522	APOBEC1	78	42.162	ENSACAG00000028578	-	98	42.162	Anolis_carolinensis
ENSVVUG00000010522	APOBEC1	100	77.542	ENSANAG00000027743	APOBEC1	95	77.542	Aotus_nancymaae
ENSVVUG00000010522	APOBEC1	100	74.153	ENSBTAG00000014683	APOBEC1	100	74.153	Bos_taurus
ENSVVUG00000010522	APOBEC1	94	78.733	ENSCJAG00000005398	APOBEC1	100	78.733	Callithrix_jacchus
ENSVVUG00000010522	APOBEC1	100	98.305	ENSCAFG00000013901	APOBEC1	100	98.305	Canis_familiaris
ENSVVUG00000010522	APOBEC1	96	96.903	ENSCAFG00020003511	APOBEC1	95	96.903	Canis_lupus_dingo
ENSVVUG00000010522	APOBEC1	98	73.593	ENSCHIG00000011898	APOBEC1	96	73.593	Capra_hircus
ENSVVUG00000010522	APOBEC1	58	81.884	ENSTSYG00000029141	APOBEC1	98	81.884	Carlito_syrichta
ENSVVUG00000010522	APOBEC1	91	68.372	ENSCAPG00000015882	-	100	68.372	Cavia_aperea
ENSVVUG00000010522	APOBEC1	99	67.660	ENSCPOG00000033068	APOBEC1	99	67.660	Cavia_porcellus
ENSVVUG00000010522	APOBEC1	100	77.966	ENSCCAG00000022258	APOBEC1	100	77.966	Cebus_capucinus
ENSVVUG00000010522	APOBEC1	100	80.932	ENSCATG00000021613	APOBEC1	95	80.932	Cercocebus_atys
ENSVVUG00000010522	APOBEC1	97	70.000	ENSCLAG00000014645	APOBEC1	100	70.000	Chinchilla_lanigera
ENSVVUG00000010522	APOBEC1	81	81.053	ENSCSAG00000009817	APOBEC1	99	81.053	Chlorocebus_sabaeus
ENSVVUG00000010522	APOBEC1	77	45.989	ENSCPBG00000017398	-	82	45.989	Chrysemys_picta_bellii
ENSVVUG00000010522	APOBEC1	87	45.894	ENSCPBG00000014327	-	77	45.894	Chrysemys_picta_bellii
ENSVVUG00000010522	APOBEC1	83	47.980	ENSCPBG00000014328	-	86	47.980	Chrysemys_picta_bellii
ENSVVUG00000010522	APOBEC1	83	47.959	ENSCPBG00000014329	-	54	47.959	Chrysemys_picta_bellii
ENSVVUG00000010522	APOBEC1	78	47.594	ENSCPBG00000014331	-	77	47.594	Chrysemys_picta_bellii
ENSVVUG00000010522	APOBEC1	78	48.663	ENSCPBG00000014335	-	76	48.663	Chrysemys_picta_bellii
ENSVVUG00000010522	APOBEC1	97	80.870	ENSCANG00000038359	APOBEC1	100	80.870	Colobus_angolensis_palliatus
ENSVVUG00000010522	APOBEC1	97	69.432	ENSCGRG00001011130	Apobec1	100	69.432	Cricetulus_griseus_chok1gshd
ENSVVUG00000010522	APOBEC1	97	69.432	ENSCGRG00000008644	Apobec1	100	69.432	Cricetulus_griseus_crigri
ENSVVUG00000010522	APOBEC1	100	75.424	ENSDNOG00000010926	APOBEC1	100	75.424	Dasypus_novemcinctus
ENSVVUG00000010522	APOBEC1	90	69.159	ENSDORG00000023717	Apobec1	100	69.159	Dipodomys_ordii
ENSVVUG00000010522	APOBEC1	99	74.468	ENSETEG00000004867	APOBEC1	99	74.468	Echinops_telfairi
ENSVVUG00000010522	APOBEC1	99	81.116	ENSEASG00005015951	APOBEC1	98	81.116	Equus_asinus_asinus
ENSVVUG00000010522	APOBEC1	81	82.105	ENSECAG00000017163	APOBEC1	99	82.105	Equus_caballus
ENSVVUG00000010522	APOBEC1	93	66.516	ENSEEUG00000009112	-	98	66.516	Erinaceus_europaeus
ENSVVUG00000010522	APOBEC1	86	53.922	ENSEEUG00000007530	-	97	53.922	Erinaceus_europaeus
ENSVVUG00000010522	APOBEC1	100	85.593	ENSFCAG00000009350	APOBEC1	100	85.593	Felis_catus
ENSVVUG00000010522	APOBEC1	60	47.887	ENSFALG00000007257	-	70	47.887	Ficedula_albicollis
ENSVVUG00000010522	APOBEC1	88	59.420	ENSFDAG00000018470	APOBEC1	99	59.420	Fukomys_damarensis
ENSVVUG00000010522	APOBEC1	68	50.000	ENSGAGG00000004947	-	82	52.273	Gopherus_agassizii
ENSVVUG00000010522	APOBEC1	72	48.538	ENSGAGG00000006624	-	62	48.538	Gopherus_agassizii
ENSVVUG00000010522	APOBEC1	92	47.945	ENSGAGG00000011837	-	90	50.781	Gopherus_agassizii
ENSVVUG00000010522	APOBEC1	83	45.178	ENSGAGG00000021744	-	77	45.178	Gopherus_agassizii
ENSVVUG00000010522	APOBEC1	76	41.530	ENSGAGG00000021745	-	68	41.530	Gopherus_agassizii
ENSVVUG00000010522	APOBEC1	99	65.532	ENSHGLG00000001495	APOBEC1	99	65.532	Heterocephalus_glaber_female
ENSVVUG00000010522	APOBEC1	99	63.830	ENSHGLG00100002187	APOBEC1	99	63.830	Heterocephalus_glaber_male
ENSVVUG00000010522	APOBEC1	91	66.047	ENSSTOG00000021971	APOBEC1	100	83.673	Ictidomys_tridecemlineatus
ENSVVUG00000010522	APOBEC1	97	73.799	ENSJJAG00000022108	Apobec1	100	73.799	Jaculus_jaculus
ENSVVUG00000010522	APOBEC1	94	77.578	ENSLAFG00000030837	APOBEC1	100	77.578	Loxodonta_africana
ENSVVUG00000010522	APOBEC1	100	80.508	ENSMFAG00000000277	APOBEC1	99	81.579	Macaca_fascicularis
ENSVVUG00000010522	APOBEC1	100	80.085	ENSMNEG00000029670	APOBEC1	100	80.085	Macaca_nemestrina
ENSVVUG00000010522	APOBEC1	100	80.932	ENSMLEG00000036301	APOBEC1	100	80.932	Mandrillus_leucophaeus
ENSVVUG00000010522	APOBEC1	92	70.833	ENSMAUG00000022167	Apobec1	97	70.833	Mesocricetus_auratus
ENSVVUG00000010522	APOBEC1	100	79.237	ENSMICG00000043645	APOBEC1	100	79.237	Microcebus_murinus
ENSVVUG00000010522	APOBEC1	100	67.373	ENSMODG00000018004	APOBEC1	100	67.373	Monodelphis_domestica
ENSVVUG00000010522	APOBEC1	97	71.053	ENSMUSG00000040613	Apobec1	99	71.053	Mus_musculus
ENSVVUG00000010522	APOBEC1	97	68.860	MGP_PahariEiJ_G0022580	-	99	68.860	Mus_pahari
ENSVVUG00000010522	APOBEC1	97	71.053	MGP_SPRETEiJ_G0029857	Apobec1	99	71.053	Mus_spretus
ENSVVUG00000010522	APOBEC1	100	85.593	ENSMPUG00000017532	APOBEC1	100	85.593	Mustela_putorius_furo
ENSVVUG00000010522	APOBEC1	97	74.236	ENSNGAG00000022607	Apobec1	100	74.236	Nannospalax_galili
ENSVVUG00000010522	APOBEC1	100	79.661	ENSNLEG00000005342	APOBEC1	100	79.661	Nomascus_leucogenys
ENSVVUG00000010522	APOBEC1	100	65.678	ENSMEUG00000013406	APOBEC1	100	65.678	Notamacropus_eugenii
ENSVVUG00000010522	APOBEC1	77	62.983	ENSOPRG00000009508	-	100	62.983	Ochotona_princeps
ENSVVUG00000010522	APOBEC1	100	73.305	ENSOCUG00000025736	APOBEC1	88	73.305	Oryctolagus_cuniculus
ENSVVUG00000010522	APOBEC1	99	78.541	ENSOGAG00000026415	APOBEC1	99	78.541	Otolemur_garnettii
ENSVVUG00000010522	APOBEC1	100	73.305	ENSOARG00000002072	APOBEC1	99	73.305	Ovis_aries
ENSVVUG00000010522	APOBEC1	99	72.961	ENSPPAG00000027657	APOBEC1	99	72.961	Pan_paniscus
ENSVVUG00000010522	APOBEC1	100	86.017	ENSPPRG00000012182	APOBEC1	100	86.017	Panthera_pardus
ENSVVUG00000010522	APOBEC1	100	86.017	ENSPTIG00000020280	APOBEC1	100	86.017	Panthera_tigris_altaica
ENSVVUG00000010522	APOBEC1	100	79.237	ENSPTRG00000004614	APOBEC1	100	79.237	Pan_troglodytes
ENSVVUG00000010522	APOBEC1	100	81.356	ENSPANG00000021027	APOBEC1	100	81.356	Papio_anubis
ENSVVUG00000010522	APOBEC1	57	50.450	ENSPSIG00000012791	-	75	50.450	Pelodiscus_sinensis
ENSVVUG00000010522	APOBEC1	78	47.027	ENSPSIG00000012568	-	80	47.027	Pelodiscus_sinensis
ENSVVUG00000010522	APOBEC1	97	69.869	ENSPEMG00000023841	Apobec1	100	69.869	Peromyscus_maniculatus_bairdii
ENSVVUG00000010522	APOBEC1	100	69.068	ENSPCIG00000023973	APOBEC1	100	69.068	Phascolarctos_cinereus
ENSVVUG00000010522	APOBEC1	100	78.390	ENSPPYG00000004228	APOBEC1	95	78.390	Pongo_abelii
ENSVVUG00000010522	APOBEC1	79	78.610	ENSPCAG00000008733	APOBEC1	100	78.610	Procavia_capensis
ENSVVUG00000010522	APOBEC1	94	80.631	ENSPCOG00000013957	APOBEC1	98	80.631	Propithecus_coquereli
ENSVVUG00000010522	APOBEC1	100	63.983	ENSPVAG00000010709	APOBEC1	100	63.983	Pteropus_vampyrus
ENSVVUG00000010522	APOBEC1	97	69.298	ENSRNOG00000015411	Apobec1	99	69.298	Rattus_norvegicus
ENSVVUG00000010522	APOBEC1	100	80.932	ENSRBIG00000031161	APOBEC1	100	80.932	Rhinopithecus_bieti
ENSVVUG00000010522	APOBEC1	100	80.932	ENSRROG00000033576	APOBEC1	99	82.105	Rhinopithecus_roxellana
ENSVVUG00000010522	APOBEC1	73	79.769	ENSSBOG00000030587	APOBEC1	98	79.769	Saimiri_boliviensis_boliviensis
ENSVVUG00000010522	APOBEC1	96	68.722	ENSSHAG00000008925	APOBEC1	99	68.722	Sarcophilus_harrisii
ENSVVUG00000010522	APOBEC1	73	67.442	ENSSARG00000000032	-	100	67.442	Sorex_araneus
ENSVVUG00000010522	APOBEC1	56	71.212	ENSSARG00000011972	-	100	71.212	Sorex_araneus
ENSVVUG00000010522	APOBEC1	91	42.342	ENSSPUG00000009044	-	85	42.342	Sphenodon_punctatus
ENSVVUG00000010522	APOBEC1	100	80.085	ENSSSCG00000000668	APOBEC1	100	80.085	Sus_scrofa
ENSVVUG00000010522	APOBEC1	61	51.389	ENSTGUG00000013118	-	99	51.389	Taeniopygia_guttata
ENSVVUG00000010522	APOBEC1	94	76.923	ENSTBEG00000010043	APOBEC1	94	76.923	Tupaia_belangeri
ENSVVUG00000010522	APOBEC1	79	76.471	ENSTTRG00000014015	APOBEC1	100	76.471	Tursiops_truncatus
ENSVVUG00000010522	APOBEC1	99	87.124	ENSUAMG00000011636	APOBEC1	95	87.124	Ursus_americanus
ENSVVUG00000010522	APOBEC1	99	87.124	ENSUMAG00000016552	APOBEC1	95	87.124	Ursus_maritimus
ENSVVUG00000010522	APOBEC1	100	75.000	ENSVPAG00000001343	APOBEC1	100	75.000	Vicugna_pacos