EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000011060 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 2161 bases
Position: chrNBDQ01000103.1:2429844-2432004
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000015087	RRM_5	PF13893.6	2.1e-06	1	1
ENSVVUP00000015087	RRM_1	PF00076.22	1.6e-38	1	2
ENSVVUP00000015087	RRM_1	PF00076.22	1.6e-38	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000019826	-	660	-	ENSVVUP00000015087	219 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000011060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000011060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000011060	-	75	32.812	ENSVVUG00000011029	TIAL1	70	30.857
ENSVVUG00000011060	-	74	34.211	ENSVVUG00000004660	RBMS3	67	34.211
ENSVVUG00000011060	-	72	36.620	ENSVVUG00000017670	RBM3	89	36.364
ENSVVUG00000011060	-	73	66.250	ENSVVUG00000015892	-	78	66.250
ENSVVUG00000011060	-	75	57.738	ENSVVUG00000013172	PABPC5	96	57.955
ENSVVUG00000011060	-	70	32.927	ENSVVUG00000006737	-	97	32.927
ENSVVUG00000011060	-	76	31.176	ENSVVUG00000028040	TIA1	64	31.176
ENSVVUG00000011060	-	89	63.473	ENSVVUG00000018939	PABPC1L	62	63.473
ENSVVUG00000011060	-	88	67.708	ENSVVUG00000013156	PABPC1	50	67.708
ENSVVUG00000011060	-	76	70.060	ENSVVUG00000005215	PABPC4	60	70.060
ENSVVUG00000011060	-	69	32.278	ENSVVUG00000012518	TRNAU1AP	53	32.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000011060	-	74	76.074	ENSG00000254535	PABPC4L	87	76.074	Homo_sapiens
ENSVVUG00000011060	-	74	76.074	ENSANAG00000017199	PABPC4L	75	76.074	Aotus_nancymaae
ENSVVUG00000011060	-	75	77.439	ENSBTAG00000046902	PABPC4L	93	77.439	Bos_taurus
ENSVVUG00000011060	-	74	75.460	ENSCJAG00000045332	PABPC4L	75	75.460	Callithrix_jacchus
ENSVVUG00000011060	-	99	95.679	ENSCAFG00020019182	-	63	95.679	Canis_lupus_dingo
ENSVVUG00000011060	-	75	76.829	ENSCHIG00000007231	PABPC4L	93	76.829	Capra_hircus
ENSVVUG00000011060	-	72	71.756	ENSCAPG00000000555	PABPC4L	95	71.756	Cavia_aperea
ENSVVUG00000011060	-	76	66.867	ENSCPOG00000033167	PABPC4L	96	66.867	Cavia_porcellus
ENSVVUG00000011060	-	74	75.460	ENSCCAG00000031681	PABPC4L	75	75.460	Cebus_capucinus
ENSVVUG00000011060	-	76	72.892	ENSCLAG00000017628	PABPC4L	89	72.892	Chinchilla_lanigera
ENSVVUG00000011060	-	74	74.847	ENSCANG00000037677	PABPC4L	87	74.847	Colobus_angolensis_palliatus
ENSVVUG00000011060	-	82	71.341	ENSCGRG00001002070	Pabpc4l	96	71.341	Cricetulus_griseus_chok1gshd
ENSVVUG00000011060	-	82	71.341	ENSCGRG00000020086	Pabpc4l	96	71.341	Cricetulus_griseus_crigri
ENSVVUG00000011060	-	76	75.301	ENSDNOG00000031077	PABPC4L	85	75.301	Dasypus_novemcinctus
ENSVVUG00000011060	-	75	76.829	ENSEASG00005007883	PABPC4L	89	76.829	Equus_asinus_asinus
ENSVVUG00000011060	-	75	76.829	ENSECAG00000031416	PABPC4L	93	76.829	Equus_caballus
ENSVVUG00000011060	-	89	78.659	ENSFCAG00000028270	PABPC4L	96	78.659	Felis_catus
ENSVVUG00000011060	-	76	78.916	ENSFDAG00000019606	PABPC4L	96	78.916	Fukomys_damarensis
ENSVVUG00000011060	-	74	76.074	ENSGGOG00000024991	PABPC4L	89	76.074	Gorilla_gorilla
ENSVVUG00000011060	-	75	77.576	ENSHGLG00000020104	PABPC4L	96	77.576	Heterocephalus_glaber_female
ENSVVUG00000011060	-	75	77.576	ENSHGLG00100020648	PABPC4L	96	77.576	Heterocephalus_glaber_male
ENSVVUG00000011060	-	75	74.390	ENSSTOG00000019472	PABPC4L	88	74.390	Ictidomys_tridecemlineatus
ENSVVUG00000011060	-	75	73.171	ENSJJAG00000004090	Pabpc4l	90	73.171	Jaculus_jaculus
ENSVVUG00000011060	-	75	70.122	ENSMAUG00000016313	Pabpc4l	89	70.122	Mesocricetus_auratus
ENSVVUG00000011060	-	76	75.904	ENSMICG00000029683	PABPC4L	89	75.904	Microcebus_murinus
ENSVVUG00000011060	-	75	71.341	ENSMOCG00000007551	Pabpc4l	89	71.341	Microtus_ochrogaster
ENSVVUG00000011060	-	75	68.902	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	72.000	Mus_caroli
ENSVVUG00000011060	-	75	68.293	ENSMUSG00000090919	Pabpc4l	100	72.000	Mus_musculus
ENSVVUG00000011060	-	75	67.683	MGP_PahariEiJ_G0026409	Pabpc4l	100	70.000	Mus_pahari
ENSVVUG00000011060	-	75	67.683	MGP_SPRETEiJ_G0025903	Pabpc4l	100	72.000	Mus_spretus
ENSVVUG00000011060	-	75	71.341	ENSMLUG00000008254	PABPC4L	93	71.341	Myotis_lucifugus
ENSVVUG00000011060	-	76	72.289	ENSNGAG00000001502	Pabpc4l	89	72.289	Nannospalax_galili
ENSVVUG00000011060	-	74	76.074	ENSNLEG00000019300	PABPC4L	87	76.074	Nomascus_leucogenys
ENSVVUG00000011060	-	76	67.470	ENSOGAG00000026166	PABPC4L	95	67.470	Otolemur_garnettii
ENSVVUG00000011060	-	74	76.074	ENSPPAG00000043745	PABPC4L	91	76.074	Pan_paniscus
ENSVVUG00000011060	-	89	78.049	ENSPPRG00000018628	PABPC4L	96	78.049	Panthera_pardus
ENSVVUG00000011060	-	89	78.659	ENSPTIG00000010106	PABPC4L	96	78.659	Panthera_tigris_altaica
ENSVVUG00000011060	-	74	76.074	ENSPTRG00000045513	-	74	76.074	Pan_troglodytes
ENSVVUG00000011060	-	75	72.561	ENSPEMG00000012565	Pabpc4l	89	72.561	Peromyscus_maniculatus_bairdii
ENSVVUG00000011060	-	76	73.494	ENSPCOG00000025578	PABPC4L	91	73.494	Propithecus_coquereli
ENSVVUG00000011060	-	75	67.073	ENSRNOG00000029749	Pabpc4l	96	67.073	Rattus_norvegicus
ENSVVUG00000011060	-	74	76.074	ENSRBIG00000030229	PABPC4L	87	76.074	Rhinopithecus_bieti
ENSVVUG00000011060	-	74	76.074	ENSRROG00000020367	PABPC4L	88	76.074	Rhinopithecus_roxellana
ENSVVUG00000011060	-	74	77.301	ENSSBOG00000016382	PABPC4L	87	77.301	Saimiri_boliviensis_boliviensis
ENSVVUG00000011060	-	75	62.195	ENSSSCG00000009067	PABPC4L	88	62.195	Sus_scrofa
ENSVVUG00000011060	-	75	76.829	ENSUAMG00000001289	PABPC4L	93	76.829	Ursus_americanus
ENSVVUG00000011060	-	75	76.829	ENSUMAG00000014887	PABPC4L	93	76.829	Ursus_maritimus