EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000011182 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 30934 bases
Position: chrNBDQ01000201.1:1613023-1643956
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000015223	zf-CCCH	PF00642.24	1.7e-05	1	1
ENSVVUP00000015230	zf-CCCH	PF00642.24	2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000020025	-	2898	-	ENSVVUP00000015223	688 (aa)	-	-
ENSVVUT00000020032	-	2881	-	ENSVVUP00000015230	779 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000011182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000011182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000011182	-	77	64.286	ENSVVUG00000014786	UNK	64	74.436

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000011182	-	81	95.238	ENSG00000059145	UNKL	100	84.211	Homo_sapiens
ENSVVUG00000011182	-	77	88.095	ENSAPOG00000023784	unkl	70	87.597	Acanthochromis_polyacanthus
ENSVVUG00000011182	-	73	86.047	ENSACIG00000023268	unkl	69	86.047	Amphilophus_citrinellus
ENSVVUG00000011182	-	77	88.095	ENSAOCG00000022845	unkl	70	87.597	Amphiprion_ocellaris
ENSVVUG00000011182	-	77	88.095	ENSAPEG00000011709	unkl	70	88.281	Amphiprion_percula
ENSVVUG00000011182	-	77	88.095	ENSATEG00000004328	unkl	71	87.597	Anabas_testudineus
ENSVVUG00000011182	-	67	88.889	ENSAPLG00000016186	-	60	88.889	Anas_platyrhynchos
ENSVVUG00000011182	-	81	84.921	ENSANAG00000021942	-	77	84.921	Aotus_nancymaae
ENSVVUG00000011182	-	72	86.508	ENSACLG00000006189	unkl	70	86.508	Astatotilapia_calliptera
ENSVVUG00000011182	-	72	89.062	ENSAMXG00000007890	unkl	72	89.062	Astyanax_mexicanus
ENSVVUG00000011182	-	81	90.476	ENSBTAG00000014126	-	82	90.476	Bos_taurus
ENSVVUG00000011182	-	83	78.472	ENSCJAG00000013151	-	73	78.472	Callithrix_jacchus
ENSVVUG00000011182	-	81	98.413	ENSCAFG00000019581	UNKL	75	98.413	Canis_familiaris
ENSVVUG00000011182	-	75	97.931	ENSCAFG00020001284	-	72	97.931	Canis_lupus_dingo
ENSVVUG00000011182	-	81	96.032	ENSTSYG00000033619	-	74	96.032	Carlito_syrichta
ENSVVUG00000011182	-	73	92.188	ENSCAPG00000014785	-	75	92.188	Cavia_aperea
ENSVVUG00000011182	-	81	92.857	ENSCPOG00000011846	-	74	92.857	Cavia_porcellus
ENSVVUG00000011182	-	81	94.444	ENSCCAG00000022808	-	74	94.444	Cebus_capucinus
ENSVVUG00000011182	-	81	94.444	ENSCATG00000033183	-	75	94.444	Cercocebus_atys
ENSVVUG00000011182	-	81	93.651	ENSCLAG00000015420	-	100	93.651	Chinchilla_lanigera
ENSVVUG00000011182	-	81	94.444	ENSCSAG00000011709	-	75	94.444	Chlorocebus_sabaeus
ENSVVUG00000011182	-	79	82.443	ENSCPBG00000002794	-	63	82.443	Chrysemys_picta_bellii
ENSVVUG00000011182	-	81	94.444	ENSCANG00000036315	-	85	94.444	Colobus_angolensis_palliatus
ENSVVUG00000011182	-	81	93.750	ENSCGRG00001014153	Unkl	74	95.238	Cricetulus_griseus_chok1gshd
ENSVVUG00000011182	-	81	93.750	ENSCGRG00000010384	Unkl	77	95.238	Cricetulus_griseus_crigri
ENSVVUG00000011182	-	77	88.889	ENSCSEG00000010415	unkl	69	88.889	Cynoglossus_semilaevis
ENSVVUG00000011182	-	77	87.302	ENSCVAG00000015910	unkl	69	87.302	Cyprinodon_variegatus
ENSVVUG00000011182	-	74	88.889	ENSDARG00000037838	unkl	62	88.889	Danio_rerio
ENSVVUG00000011182	-	81	90.476	ENSDORG00000015663	Unkl	78	87.692	Dipodomys_ordii
ENSVVUG00000011182	-	81	88.889	ENSEASG00005000274	-	74	88.889	Equus_asinus_asinus
ENSVVUG00000011182	-	81	94.444	ENSECAG00000010641	UNKL	100	94.444	Equus_caballus
ENSVVUG00000011182	-	76	89.683	ENSELUG00000021446	unkl	71	89.147	Esox_lucius
ENSVVUG00000011182	-	81	96.032	ENSFCAG00000010643	-	74	91.729	Felis_catus
ENSVVUG00000011182	-	77	87.302	ENSFHEG00000002811	unkl	69	87.302	Fundulus_heteroclitus
ENSVVUG00000011182	-	75	89.062	ENSGALG00000043765	-	69	89.062	Gallus_gallus
ENSVVUG00000011182	-	77	86.508	ENSGAFG00000017960	unkl	69	86.508	Gambusia_affinis
ENSVVUG00000011182	-	79	85.714	ENSGAGG00000023664	-	71	85.714	Gopherus_agassizii
ENSVVUG00000011182	-	81	95.238	ENSGGOG00000014915	-	74	95.238	Gorilla_gorilla
ENSVVUG00000011182	-	73	86.508	ENSHBUG00000003486	unkl	70	86.508	Haplochromis_burtoni
ENSVVUG00000011182	-	81	92.857	ENSHGLG00000001586	-	75	92.857	Heterocephalus_glaber_female
ENSVVUG00000011182	-	81	92.857	ENSHGLG00100007463	-	77	92.857	Heterocephalus_glaber_male
ENSVVUG00000011182	-	75	81.884	ENSHCOG00000015734	unkl	70	81.884	Hippocampus_comes
ENSVVUG00000011182	-	75	88.889	ENSIPUG00000019510	unkl	68	88.889	Ictalurus_punctatus
ENSVVUG00000011182	-	81	95.238	ENSSTOG00000003487	-	77	95.238	Ictidomys_tridecemlineatus
ENSVVUG00000011182	-	74	90.780	ENSJJAG00000011047	Unkl	73	90.780	Jaculus_jaculus
ENSVVUG00000011182	-	73	87.500	ENSKMAG00000018810	unkl	71	87.500	Kryptolebias_marmoratus
ENSVVUG00000011182	-	71	90.164	ENSLBEG00000023912	unkl	70	90.164	Labrus_bergylta
ENSVVUG00000011182	-	72	87.692	ENSLACG00000009285	unkl	61	87.692	Latimeria_chalumnae
ENSVVUG00000011182	-	77	88.889	ENSLOCG00000003648	unkl	69	88.889	Lepisosteus_oculatus
ENSVVUG00000011182	-	82	83.448	ENSLAFG00000018262	-	75	83.448	Loxodonta_africana
ENSVVUG00000011182	-	81	94.444	ENSMFAG00000000632	-	74	94.444	Macaca_fascicularis
ENSVVUG00000011182	-	81	94.444	ENSMMUG00000012440	-	74	94.444	Macaca_mulatta
ENSVVUG00000011182	-	81	94.444	ENSMNEG00000036131	-	75	94.444	Macaca_nemestrina
ENSVVUG00000011182	-	81	94.444	ENSMLEG00000037946	-	75	94.444	Mandrillus_leucophaeus
ENSVVUG00000011182	-	72	88.889	ENSMAMG00000002709	unkl	73	83.969	Mastacembelus_armatus
ENSVVUG00000011182	-	72	86.508	ENSMZEG00005022469	unkl	70	86.508	Maylandia_zebra
ENSVVUG00000011182	-	75	89.683	ENSMGAG00000006920	UNKL	66	89.683	Meleagris_gallopavo
ENSVVUG00000011182	-	81	96.032	ENSMAUG00000016281	Unkl	74	96.032	Mesocricetus_auratus
ENSVVUG00000011182	-	81	69.070	ENSMICG00000007141	-	73	70.233	Microcebus_murinus
ENSVVUG00000011182	-	81	95.238	ENSMOCG00000011424	Unkl	74	95.238	Microtus_ochrogaster
ENSVVUG00000011182	-	75	88.372	ENSMMOG00000014848	unkl	72	88.372	Mola_mola
ENSVVUG00000011182	-	80	88.550	ENSMODG00000016188	-	67	88.550	Monodelphis_domestica
ENSVVUG00000011182	-	72	87.302	ENSMALG00000020837	unkl	61	87.302	Monopterus_albus
ENSVVUG00000011182	-	81	95.238	MGP_CAROLIEiJ_G0021225	Unkl	100	95.238	Mus_caroli
ENSVVUG00000011182	-	81	95.238	ENSMUSG00000015127	Unkl	100	95.238	Mus_musculus
ENSVVUG00000011182	-	81	95.238	MGP_PahariEiJ_G0023543	Unkl	74	95.238	Mus_pahari
ENSVVUG00000011182	-	81	95.238	MGP_SPRETEiJ_G0022136	Unkl	100	95.238	Mus_spretus
ENSVVUG00000011182	-	81	96.032	ENSMPUG00000015653	-	83	93.130	Mustela_putorius_furo
ENSVVUG00000011182	-	80	96.800	ENSMLUG00000011207	-	69	96.800	Myotis_lucifugus
ENSVVUG00000011182	-	81	95.238	ENSNGAG00000002821	Unkl	75	95.238	Nannospalax_galili
ENSVVUG00000011182	-	72	86.508	ENSNBRG00000015104	unkl	69	86.508	Neolamprologus_brichardi
ENSVVUG00000011182	-	81	95.238	ENSNLEG00000008624	-	76	95.238	Nomascus_leucogenys
ENSVVUG00000011182	-	81	92.857	ENSODEG00000017747	-	74	92.857	Octodon_degus
ENSVVUG00000011182	-	73	85.827	ENSONIG00000001411	unkl	60	85.827	Oreochromis_niloticus
ENSVVUG00000011182	-	73	88.889	ENSORLG00000005070	unkl	69	88.889	Oryzias_latipes
ENSVVUG00000011182	-	73	88.889	ENSORLG00020005376	unkl	69	88.889	Oryzias_latipes_hni
ENSVVUG00000011182	-	73	88.889	ENSORLG00015018545	unkl	69	88.889	Oryzias_latipes_hsok
ENSVVUG00000011182	-	72	88.095	ENSOMEG00000023985	unkl	70	86.923	Oryzias_melastigma
ENSVVUG00000011182	-	81	89.683	ENSOARG00000015636	-	74	89.683	Ovis_aries
ENSVVUG00000011182	-	81	95.238	ENSPPAG00000043365	-	85	95.238	Pan_paniscus
ENSVVUG00000011182	-	81	96.032	ENSPPRG00000018472	-	77	91.729	Panthera_pardus
ENSVVUG00000011182	-	57	94.118	ENSPTIG00000000863	-	62	94.118	Panthera_tigris_altaica
ENSVVUG00000011182	-	81	95.238	ENSPTRG00000007591	UNKL	75	95.238	Pan_troglodytes
ENSVVUG00000011182	-	81	94.444	ENSPANG00000015754	-	75	94.444	Papio_anubis
ENSVVUG00000011182	-	73	88.889	ENSPKIG00000006764	-	98	84.444	Paramormyrops_kingsleyae
ENSVVUG00000011182	-	74	88.095	ENSPKIG00000002101	unkl	68	88.095	Paramormyrops_kingsleyae
ENSVVUG00000011182	-	62	79.167	ENSPSIG00000011268	-	79	79.167	Pelodiscus_sinensis
ENSVVUG00000011182	-	74	86.466	ENSPMGG00000020856	unkl	70	86.466	Periophthalmus_magnuspinnatus
ENSVVUG00000011182	-	81	95.238	ENSPEMG00000008937	Unkl	74	95.238	Peromyscus_maniculatus_bairdii
ENSVVUG00000011182	-	80	88.550	ENSPCIG00000015633	-	71	88.550	Phascolarctos_cinereus
ENSVVUG00000011182	-	75	86.508	ENSPFOG00000010836	unkl	62	86.508	Poecilia_formosa
ENSVVUG00000011182	-	75	86.508	ENSPLAG00000002294	unkl	67	86.508	Poecilia_latipinna
ENSVVUG00000011182	-	75	86.508	ENSPMEG00000019000	unkl	67	86.508	Poecilia_mexicana
ENSVVUG00000011182	-	77	86.508	ENSPREG00000007918	unkl	70	86.508	Poecilia_reticulata
ENSVVUG00000011182	-	71	85.039	ENSPPYG00000006950	-	74	85.714	Pongo_abelii
ENSVVUG00000011182	-	81	93.600	ENSPCOG00000017889	-	74	92.857	Propithecus_coquereli
ENSVVUG00000011182	-	72	86.508	ENSPNYG00000008111	unkl	72	85.271	Pundamilia_nyererei
ENSVVUG00000011182	-	77	89.683	ENSPNAG00000010422	unkl	72	89.922	Pygocentrus_nattereri
ENSVVUG00000011182	-	81	95.238	ENSRNOG00000054605	Unkl	74	95.238	Rattus_norvegicus
ENSVVUG00000011182	-	81	61.538	ENSRBIG00000040235	-	74	59.674	Rhinopithecus_bieti
ENSVVUG00000011182	-	81	94.444	ENSRROG00000029341	-	77	94.444	Rhinopithecus_roxellana
ENSVVUG00000011182	-	81	94.444	ENSSBOG00000031173	-	77	94.444	Saimiri_boliviensis_boliviensis
ENSVVUG00000011182	-	80	88.550	ENSSHAG00000008411	-	65	88.550	Sarcophilus_harrisii
ENSVVUG00000011182	-	79	90.476	ENSSFOG00015018904	unkl	68	84.058	Scleropages_formosus
ENSVVUG00000011182	-	72	88.889	ENSSMAG00000005106	unkl	67	88.889	Scophthalmus_maximus
ENSVVUG00000011182	-	74	88.889	ENSSDUG00000019045	unkl	70	88.889	Seriola_dumerili
ENSVVUG00000011182	-	77	88.889	ENSSLDG00000010672	unkl	70	88.889	Seriola_lalandi_dorsalis
ENSVVUG00000011182	-	69	85.496	ENSSPUG00000009763	-	61	85.496	Sphenodon_punctatus
ENSVVUG00000011182	-	73	88.095	ENSSPAG00000017109	unkl	69	87.597	Stegastes_partitus
ENSVVUG00000011182	-	87	78.454	ENSSSCG00000022963	-	74	91.339	Sus_scrofa
ENSVVUG00000011182	-	75	88.800	ENSTRUG00000012086	unkl	67	88.800	Takifugu_rubripes
ENSVVUG00000011182	-	76	85.385	ENSTNIG00000018588	unkl	65	85.385	Tetraodon_nigroviridis
ENSVVUG00000011182	-	82	92.063	ENSXETG00000021599	unkl	75	92.063	Xenopus_tropicalis
ENSVVUG00000011182	-	73	86.508	ENSXCOG00000016491	unkl	67	86.508	Xiphophorus_couchianus
ENSVVUG00000011182	-	73	86.508	ENSXMAG00000009520	unkl	67	86.508	Xiphophorus_maculatus