EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000011293 (Gene tree)
Gene ID: -
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 48645 bases
Position: chrNBDQ01000069.1:9181069-9229713
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000016852	Rif1_N	PF12231.8	2.4e-73	1	1
ENSVVUP00000016817	Rif1_N	PF12231.8	2.5e-73	1	1
ENSVVUP00000016838	Rif1_N	PF12231.8	2.5e-73	1	1
ENSVVUP00000016759	Rif1_N	PF12231.8	2.6e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000022177	RIF1-203	7221	-	ENSVVUP00000016838	2406 (aa)	-	-
ENSVVUT00000022063	RIF1-201	7344	-	ENSVVUP00000016759	2447 (aa)	-	-
ENSVVUT00000022146	RIF1-202	7287	-	ENSVVUP00000016817	2428 (aa)	-	-
ENSVVUT00000022193	RIF1-204	7209	-	ENSVVUP00000016852	2402 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000011293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000011293's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000011293	RIF1	100	77.791	ENSG00000080345	RIF1	97	89.051	Homo_sapiens
ENSVVUG00000011293	RIF1	63	47.258	ENSAPOG00000011073	rif1	50	48.965	Acanthochromis_polyacanthus
ENSVVUG00000011293	RIF1	99	88.767	ENSAMEG00000008461	RIF1	100	88.767	Ailuropoda_melanoleuca
ENSVVUG00000011293	RIF1	65	50.616	ENSACIG00000017765	rif1	71	50.616	Amphilophus_citrinellus
ENSVVUG00000011293	RIF1	64	47.843	ENSAOCG00000017231	rif1	65	47.162	Amphiprion_ocellaris
ENSVVUG00000011293	RIF1	66	55.570	ENSAPEG00000013228	rif1	65	55.570	Amphiprion_percula
ENSVVUG00000011293	RIF1	70	48.066	ENSATEG00000022887	rif1	71	48.066	Anabas_testudineus
ENSVVUG00000011293	RIF1	89	66.569	ENSAPLG00000007092	RIF1	97	66.569	Anas_platyrhynchos
ENSVVUG00000011293	RIF1	87	52.184	ENSACAG00000003714	RIF1	92	52.184	Anolis_carolinensis
ENSVVUG00000011293	RIF1	100	76.976	ENSANAG00000024840	RIF1	100	77.177	Aotus_nancymaae
ENSVVUG00000011293	RIF1	64	50.789	ENSAMXG00000010910	rif1	65	50.703	Astyanax_mexicanus
ENSVVUG00000011293	RIF1	94	80.895	ENSBTAG00000021020	RIF1	100	80.895	Bos_taurus
ENSVVUG00000011293	RIF1	100	76.784	ENSCJAG00000003138	RIF1	100	76.703	Callithrix_jacchus
ENSVVUG00000011293	RIF1	100	97.208	ENSCAFG00000005670	RIF1	97	97.208	Canis_familiaris
ENSVVUG00000011293	RIF1	100	96.902	ENSCAFG00020016401	RIF1	100	96.902	Canis_lupus_dingo
ENSVVUG00000011293	RIF1	100	80.581	ENSCHIG00000020327	RIF1	100	80.581	Capra_hircus
ENSVVUG00000011293	RIF1	99	76.027	ENSTSYG00000008861	RIF1	100	76.068	Carlito_syrichta
ENSVVUG00000011293	RIF1	82	75.545	ENSCAPG00000008957	RIF1	96	75.545	Cavia_aperea
ENSVVUG00000011293	RIF1	99	69.733	ENSCPOG00000037898	RIF1	99	69.779	Cavia_porcellus
ENSVVUG00000011293	RIF1	100	76.008	ENSCCAG00000024760	RIF1	100	76.210	Cebus_capucinus
ENSVVUG00000011293	RIF1	100	78.266	ENSCATG00000033353	RIF1	100	78.266	Cercocebus_atys
ENSVVUG00000011293	RIF1	96	72.522	ENSCLAG00000001517	RIF1	99	72.647	Chinchilla_lanigera
ENSVVUG00000011293	RIF1	100	78.275	ENSCSAG00000016089	RIF1	100	78.185	Chlorocebus_sabaeus
ENSVVUG00000011293	RIF1	97	73.226	ENSCHOG00000007187	RIF1	97	73.376	Choloepus_hoffmanni
ENSVVUG00000011293	RIF1	95	71.302	ENSCPBG00000025885	RIF1	99	72.485	Chrysemys_picta_bellii
ENSVVUG00000011293	RIF1	100	76.833	ENSCANG00000028962	RIF1	100	77.633	Colobus_angolensis_palliatus
ENSVVUG00000011293	RIF1	99	68.283	ENSCGRG00001024589	Rif1	100	68.821	Cricetulus_griseus_chok1gshd
ENSVVUG00000011293	RIF1	99	69.606	ENSCGRG00000010713	Rif1	100	70.152	Cricetulus_griseus_crigri
ENSVVUG00000011293	RIF1	63	55.039	ENSCSEG00000003945	rif1	69	48.867	Cynoglossus_semilaevis
ENSVVUG00000011293	RIF1	64	49.258	ENSCVAG00000022479	rif1	68	49.258	Cyprinodon_variegatus
ENSVVUG00000011293	RIF1	65	49.803	ENSDARG00000062650	rif1	67	49.922	Danio_rerio
ENSVVUG00000011293	RIF1	99	75.637	ENSDNOG00000011194	RIF1	97	75.516	Dasypus_novemcinctus
ENSVVUG00000011293	RIF1	94	72.307	ENSETEG00000012421	RIF1	94	72.307	Echinops_telfairi
ENSVVUG00000011293	RIF1	93	95.000	ENSEASG00005023434	RIF1	99	95.000	Equus_asinus_asinus
ENSVVUG00000011293	RIF1	96	91.088	ENSECAG00000012679	RIF1	100	91.088	Equus_caballus
ENSVVUG00000011293	RIF1	66	48.539	ENSELUG00000006826	rif1	58	48.552	Esox_lucius
ENSVVUG00000011293	RIF1	100	85.875	ENSFCAG00000029742	RIF1	100	85.956	Felis_catus
ENSVVUG00000011293	RIF1	79	63.720	ENSFALG00000013874	RIF1	98	64.024	Ficedula_albicollis
ENSVVUG00000011293	RIF1	99	73.801	ENSFDAG00000006538	RIF1	99	73.720	Fukomys_damarensis
ENSVVUG00000011293	RIF1	63	50.162	ENSFHEG00000013721	rif1	66	50.000	Fundulus_heteroclitus
ENSVVUG00000011293	RIF1	59	50.420	ENSGMOG00000003517	rif1	89	50.420	Gadus_morhua
ENSVVUG00000011293	RIF1	80	66.471	ENSGALG00000012484	RIF1	91	66.471	Gallus_gallus
ENSVVUG00000011293	RIF1	66	54.316	ENSGAFG00000017196	rif1	76	52.381	Gambusia_affinis
ENSVVUG00000011293	RIF1	60	54.286	ENSGACG00000008579	rif1	65	54.472	Gasterosteus_aculeatus
ENSVVUG00000011293	RIF1	89	70.958	ENSGAGG00000012595	RIF1	98	72.156	Gopherus_agassizii
ENSVVUG00000011293	RIF1	90	88.269	ENSGGOG00000040178	RIF1	96	88.269	Gorilla_gorilla
ENSVVUG00000011293	RIF1	94	73.615	ENSHGLG00100009807	RIF1	99	73.615	Heterocephalus_glaber_male
ENSVVUG00000011293	RIF1	65	48.420	ENSHCOG00000015943	rif1	61	48.578	Hippocampus_comes
ENSVVUG00000011293	RIF1	50	51.660	ENSIPUG00000021703	rif1	53	50.076	Ictalurus_punctatus
ENSVVUG00000011293	RIF1	100	75.902	ENSSTOG00000020712	RIF1	100	76.213	Ictidomys_tridecemlineatus
ENSVVUG00000011293	RIF1	99	68.583	ENSJJAG00000023000	Rif1	100	68.502	Jaculus_jaculus
ENSVVUG00000011293	RIF1	64	49.531	ENSKMAG00000002852	rif1	67	49.531	Kryptolebias_marmoratus
ENSVVUG00000011293	RIF1	63	50.235	ENSLBEG00000023196	rif1	59	50.235	Labrus_bergylta
ENSVVUG00000011293	RIF1	86	62.647	ENSLACG00000005425	RIF1	89	62.647	Latimeria_chalumnae
ENSVVUG00000011293	RIF1	70	51.466	ENSLOCG00000002657	rif1	80	50.838	Lepisosteus_oculatus
ENSVVUG00000011293	RIF1	99	77.011	ENSLAFG00000009796	RIF1	100	77.011	Loxodonta_africana
ENSVVUG00000011293	RIF1	100	78.185	ENSMFAG00000032233	RIF1	100	78.185	Macaca_fascicularis
ENSVVUG00000011293	RIF1	100	78.235	ENSMMUG00000008611	RIF1	100	78.145	Macaca_mulatta
ENSVVUG00000011293	RIF1	100	78.266	ENSMNEG00000031616	RIF1	100	78.266	Macaca_nemestrina
ENSVVUG00000011293	RIF1	100	78.557	ENSMLEG00000042945	RIF1	100	78.468	Mandrillus_leucophaeus
ENSVVUG00000011293	RIF1	73	48.970	ENSMAMG00000001745	rif1	75	49.166	Mastacembelus_armatus
ENSVVUG00000011293	RIF1	65	51.456	ENSMZEG00005020920	rif1	70	51.456	Maylandia_zebra
ENSVVUG00000011293	RIF1	84	62.921	ENSMGAG00000012732	RIF1	91	63.456	Meleagris_gallopavo
ENSVVUG00000011293	RIF1	94	85.515	ENSMAUG00000013158	Rif1	99	85.515	Mesocricetus_auratus
ENSVVUG00000011293	RIF1	100	80.338	ENSMICG00000046127	RIF1	100	80.338	Microcebus_murinus
ENSVVUG00000011293	RIF1	99	68.327	ENSMOCG00000009381	Rif1	100	68.327	Microtus_ochrogaster
ENSVVUG00000011293	RIF1	63	49.839	ENSMMOG00000006519	rif1	64	49.839	Mola_mola
ENSVVUG00000011293	RIF1	100	59.944	ENSMODG00000003703	RIF1	100	59.984	Monodelphis_domestica
ENSVVUG00000011293	RIF1	65	48.490	ENSMALG00000016759	rif1	73	48.762	Monopterus_albus
ENSVVUG00000011293	RIF1	99	68.045	MGP_CAROLIEiJ_G0023555	Rif1	100	68.045	Mus_caroli
ENSVVUG00000011293	RIF1	99	68.430	ENSMUSG00000036202	Rif1	100	68.430	Mus_musculus
ENSVVUG00000011293	RIF1	99	67.287	MGP_PahariEiJ_G0025006	Rif1	100	67.287	Mus_pahari
ENSVVUG00000011293	RIF1	99	68.381	MGP_SPRETEiJ_G0024476	Rif1	100	68.381	Mus_spretus
ENSVVUG00000011293	RIF1	100	86.830	ENSMPUG00000000371	RIF1	100	86.830	Mustela_putorius_furo
ENSVVUG00000011293	RIF1	90	78.897	ENSMLUG00000003376	RIF1	100	78.897	Myotis_lucifugus
ENSVVUG00000011293	RIF1	100	71.486	ENSNGAG00000009268	Rif1	100	71.688	Nannospalax_galili
ENSVVUG00000011293	RIF1	64	50.160	ENSNBRG00000014257	rif1	70	49.688	Neolamprologus_brichardi
ENSVVUG00000011293	RIF1	100	76.383	ENSNLEG00000010955	RIF1	100	76.584	Nomascus_leucogenys
ENSVVUG00000011293	RIF1	80	79.464	ENSMEUG00000007601	-	87	79.464	Notamacropus_eugenii
ENSVVUG00000011293	RIF1	99	70.178	ENSODEG00000003950	RIF1	99	70.262	Octodon_degus
ENSVVUG00000011293	RIF1	53	63.415	ENSONIG00000013657	rif1	67	48.434	Oreochromis_niloticus
ENSVVUG00000011293	RIF1	82	74.788	ENSOANG00000006078	-	85	74.788	Ornithorhynchus_anatinus
ENSVVUG00000011293	RIF1	100	75.535	ENSOCUG00000017435	RIF1	100	75.979	Oryctolagus_cuniculus
ENSVVUG00000011293	RIF1	65	48.308	ENSORLG00020001302	rif1	70	48.702	Oryzias_latipes_hni
ENSVVUG00000011293	RIF1	65	48.542	ENSORLG00015000009	rif1	70	48.430	Oryzias_latipes_hsok
ENSVVUG00000011293	RIF1	62	49.356	ENSOMEG00000021513	rif1	67	49.200	Oryzias_melastigma
ENSVVUG00000011293	RIF1	99	76.504	ENSOGAG00000006141	RIF1	99	76.746	Otolemur_garnettii
ENSVVUG00000011293	RIF1	100	80.952	ENSOARG00000008930	RIF1	100	80.952	Ovis_aries
ENSVVUG00000011293	RIF1	100	77.630	ENSPPAG00000023754	RIF1	100	77.832	Pan_paniscus
ENSVVUG00000011293	RIF1	100	85.875	ENSPPRG00000003618	RIF1	100	85.956	Panthera_pardus
ENSVVUG00000011293	RIF1	100	85.875	ENSPTIG00000020652	RIF1	100	85.956	Panthera_tigris_altaica
ENSVVUG00000011293	RIF1	100	77.630	ENSPTRG00000012534	RIF1	100	77.832	Pan_troglodytes
ENSVVUG00000011293	RIF1	100	78.226	ENSPANG00000008525	RIF1	100	78.226	Papio_anubis
ENSVVUG00000011293	RIF1	63	51.870	ENSPKIG00000004267	rif1	72	51.974	Paramormyrops_kingsleyae
ENSVVUG00000011293	RIF1	66	45.447	ENSPMGG00000016141	rif1	83	44.321	Periophthalmus_magnuspinnatus
ENSVVUG00000011293	RIF1	99	70.090	ENSPEMG00000000446	Rif1	99	70.173	Peromyscus_maniculatus_bairdii
ENSVVUG00000011293	RIF1	99	59.188	ENSPCIG00000009185	RIF1	99	59.822	Phascolarctos_cinereus
ENSVVUG00000011293	RIF1	57	51.410	ENSPFOG00000000554	-	75	51.410	Poecilia_formosa
ENSVVUG00000011293	RIF1	64	50.786	ENSPFOG00000017804	rif1	77	50.865	Poecilia_formosa
ENSVVUG00000011293	RIF1	64	50.789	ENSPLAG00000017945	rif1	80	50.789	Poecilia_latipinna
ENSVVUG00000011293	RIF1	54	49.952	ENSPMEG00000006897	-	74	49.952	Poecilia_mexicana
ENSVVUG00000011293	RIF1	67	50.469	ENSPREG00000018052	rif1	78	52.437	Poecilia_reticulata
ENSVVUG00000011293	RIF1	100	77.872	ENSPPYG00000012846	RIF1	100	78.073	Pongo_abelii
ENSVVUG00000011293	RIF1	83	84.091	ENSPCAG00000009032	RIF1	83	83.333	Procavia_capensis
ENSVVUG00000011293	RIF1	100	80.346	ENSPCOG00000027888	RIF1	100	80.346	Propithecus_coquereli
ENSVVUG00000011293	RIF1	94	88.032	ENSPVAG00000014276	RIF1	95	88.032	Pteropus_vampyrus
ENSVVUG00000011293	RIF1	65	49.522	ENSPNYG00000012940	rif1	69	49.522	Pundamilia_nyererei
ENSVVUG00000011293	RIF1	61	53.871	ENSPNAG00000016685	rif1	64	53.871	Pygocentrus_nattereri
ENSVVUG00000011293	RIF1	99	67.569	ENSRNOG00000054901	Rif1	100	67.569	Rattus_norvegicus
ENSVVUG00000011293	RIF1	100	77.276	ENSRBIG00000003704	RIF1	100	77.478	Rhinopithecus_bieti
ENSVVUG00000011293	RIF1	100	78.243	ENSRROG00000028206	RIF1	100	78.445	Rhinopithecus_roxellana
ENSVVUG00000011293	RIF1	97	77.419	ENSSBOG00000029530	RIF1	100	77.419	Saimiri_boliviensis_boliviensis
ENSVVUG00000011293	RIF1	99	59.338	ENSSHAG00000018552	RIF1	100	58.885	Sarcophilus_harrisii
ENSVVUG00000011293	RIF1	61	51.238	ENSSFOG00015021539	rif1	69	51.238	Scleropages_formosus
ENSVVUG00000011293	RIF1	69	47.492	ENSSMAG00000011704	rif1	68	48.841	Scophthalmus_maximus
ENSVVUG00000011293	RIF1	64	51.001	ENSSDUG00000015632	rif1	76	50.351	Seriola_dumerili
ENSVVUG00000011293	RIF1	50	50.633	ENSSLDG00000019531	rif1	51	50.154	Seriola_lalandi_dorsalis
ENSVVUG00000011293	RIF1	62	83.729	ENSSARG00000007161	-	62	83.729	Sorex_araneus
ENSVVUG00000011293	RIF1	84	70.674	ENSSPUG00000003062	RIF1	90	70.674	Sphenodon_punctatus
ENSVVUG00000011293	RIF1	51	57.260	ENSSPAG00000018359	rif1	76	57.260	Stegastes_partitus
ENSVVUG00000011293	RIF1	100	80.998	ENSSSCG00000016395	RIF1	100	80.998	Sus_scrofa
ENSVVUG00000011293	RIF1	71	53.150	ENSTRUG00000015808	rif1	79	49.606	Takifugu_rubripes
ENSVVUG00000011293	RIF1	66	50.000	ENSTNIG00000011538	rif1	70	50.000	Tetraodon_nigroviridis
ENSVVUG00000011293	RIF1	83	89.241	ENSTBEG00000016082	RIF1	82	89.241	Tupaia_belangeri
ENSVVUG00000011293	RIF1	100	83.105	ENSTTRG00000011190	RIF1	100	83.105	Tursiops_truncatus
ENSVVUG00000011293	RIF1	90	87.829	ENSUAMG00000026385	RIF1	99	87.829	Ursus_americanus
ENSVVUG00000011293	RIF1	96	93.385	ENSUMAG00000000337	RIF1	99	93.385	Ursus_maritimus
ENSVVUG00000011293	RIF1	100	80.048	ENSVPAG00000002162	RIF1	100	80.048	Vicugna_pacos
ENSVVUG00000011293	RIF1	85	61.934	ENSXETG00000004530	rif1	84	61.934	Xenopus_tropicalis
ENSVVUG00000011293	RIF1	72	48.122	ENSXMAG00000000506	rif1	73	48.279	Xiphophorus_maculatus