EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000011307 (Gene tree)
Gene ID: -
Gene Symbol: LARP1B
Alias: DKFZp434K245|DKFZp686E0316|FLJ10378|LARP2
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 127739 bases
Position: chrNBDQ01000103.1:7306120-7433858
Accession: 112931590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000015435	La	PF05383.17	1.3e-21	1	1
ENSVVUP00000015414	La	PF05383.17	1.4e-21	1	1
ENSVVUP00000015403	La	PF05383.17	1.5e-21	1	1
ENSVVUP00000015394	La	PF05383.17	1.6e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000020269	LARP1B-204	1961	-	ENSVVUP00000015435	510 (aa)	-	-
ENSVVUT00000020219	LARP1B-201	4004	XM_026014274	ENSVVUP00000015394	945 (aa)	XP_025870059	UPI000DF69DA6
ENSVVUT00000020241	LARP1B-203	3172	-	ENSVVUP00000015414	870 (aa)	-	-
ENSVVUT00000020229	LARP1B-202	3926	XM_026014273	ENSVVUP00000015403	919 (aa)	XP_025870058	UPI000DF691E5

Gene Model

Click here to download ENSVVUG00000011307's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000011307's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000011307	LARP1B	95	62.426	ENSVVUG00000004644	LARP1	96	62.659

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000011307	LARP1B	100	90.588	ENSG00000138709	LARP1B	100	96.000	Homo_sapiens
ENSVVUG00000011307	LARP1B	99	57.486	ENSAPOG00000020101	larp1b	85	56.731	Acanthochromis_polyacanthus
ENSVVUG00000011307	LARP1B	99	97.053	ENSAMEG00000002748	LARP1B	99	97.091	Ailuropoda_melanoleuca
ENSVVUG00000011307	LARP1B	99	55.431	ENSACIG00000023890	larp1b	85	55.216	Amphilophus_citrinellus
ENSVVUG00000011307	LARP1B	95	56.407	ENSAOCG00000014268	larp1b	84	58.272	Amphiprion_ocellaris
ENSVVUG00000011307	LARP1B	99	57.714	ENSAPEG00000004126	larp1b	85	57.737	Amphiprion_percula
ENSVVUG00000011307	LARP1B	99	56.488	ENSATEG00000017849	larp1b	86	56.873	Anabas_testudineus
ENSVVUG00000011307	LARP1B	99	69.482	ENSAPLG00000010129	LARP1B	98	70.615	Anas_platyrhynchos
ENSVVUG00000011307	LARP1B	99	76.267	ENSACAG00000011338	LARP1B	86	78.716	Anolis_carolinensis
ENSVVUG00000011307	LARP1B	99	82.353	ENSANAG00000034618	LARP1B	97	84.375	Aotus_nancymaae
ENSVVUG00000011307	LARP1B	99	56.464	ENSACLG00000011948	larp1b	85	55.983	Astatotilapia_calliptera
ENSVVUG00000011307	LARP1B	84	57.950	ENSAMXG00000006805	larp1b	85	53.694	Astyanax_mexicanus
ENSVVUG00000011307	LARP1B	100	92.391	ENSBTAG00000012135	LARP1B	98	91.618	Bos_taurus
ENSVVUG00000011307	LARP1B	100	90.392	ENSCJAG00000003338	LARP1B	98	92.705	Callithrix_jacchus
ENSVVUG00000011307	LARP1B	100	99.674	ENSCAFG00000003831	LARP1B	100	99.674	Canis_familiaris
ENSVVUG00000011307	LARP1B	99	99.411	ENSCAFG00020018899	LARP1B	100	98.389	Canis_lupus_dingo
ENSVVUG00000011307	LARP1B	100	91.585	ENSCHIG00000023144	LARP1B	100	91.066	Capra_hircus
ENSVVUG00000011307	LARP1B	67	82.948	ENSTSYG00000002037	-	97	83.430	Carlito_syrichta
ENSVVUG00000011307	LARP1B	100	90.980	ENSCCAG00000021948	LARP1B	98	93.313	Cebus_capucinus
ENSVVUG00000011307	LARP1B	100	88.824	ENSCATG00000013541	LARP1B	100	89.825	Cercocebus_atys
ENSVVUG00000011307	LARP1B	65	87.538	ENSCLAG00000006448	-	98	87.538	Chinchilla_lanigera
ENSVVUG00000011307	LARP1B	99	90.802	ENSCSAG00000003582	LARP1B	100	90.840	Chlorocebus_sabaeus
ENSVVUG00000011307	LARP1B	99	82.353	ENSCHOG00000005354	LARP1B	100	82.770	Choloepus_hoffmanni
ENSVVUG00000011307	LARP1B	99	79.422	ENSCPBG00000017480	LARP1B	87	78.804	Chrysemys_picta_bellii
ENSVVUG00000011307	LARP1B	98	86.433	ENSCANG00000026958	LARP1B	100	86.433	Colobus_angolensis_palliatus
ENSVVUG00000011307	LARP1B	65	90.578	ENSCGRG00001004660	-	98	90.578	Cricetulus_griseus_chok1gshd
ENSVVUG00000011307	LARP1B	65	90.274	ENSCGRG00000001914	-	98	90.274	Cricetulus_griseus_crigri
ENSVVUG00000011307	LARP1B	99	52.857	ENSCSEG00000013519	larp1b	86	55.010	Cynoglossus_semilaevis
ENSVVUG00000011307	LARP1B	99	56.257	ENSCVAG00000005046	larp1b	86	55.714	Cyprinodon_variegatus
ENSVVUG00000011307	LARP1B	99	54.933	ENSDARG00000061169	larp1b	79	56.813	Danio_rerio
ENSVVUG00000011307	LARP1B	100	90.802	ENSDNOG00000018765	-	100	90.802	Dasypus_novemcinctus
ENSVVUG00000011307	LARP1B	87	83.193	ENSETEG00000012497	LARP1B	89	83.193	Echinops_telfairi
ENSVVUG00000011307	LARP1B	99	51.106	ENSEBUG00000003668	larp1b	87	52.360	Eptatretus_burgeri
ENSVVUG00000011307	LARP1B	100	94.118	ENSEASG00005018106	LARP1B	98	96.657	Equus_asinus_asinus
ENSVVUG00000011307	LARP1B	99	94.303	ENSECAG00000001088	LARP1B	82	92.709	Equus_caballus
ENSVVUG00000011307	LARP1B	75	54.074	ENSELUG00000023774	larp1b	79	48.971	Esox_lucius
ENSVVUG00000011307	LARP1B	100	95.294	ENSFCAG00000014650	-	98	96.657	Felis_catus
ENSVVUG00000011307	LARP1B	100	68.697	ENSFALG00000008098	LARP1B	100	68.697	Ficedula_albicollis
ENSVVUG00000011307	LARP1B	99	57.094	ENSFHEG00000010264	larp1b	82	56.563	Fundulus_heteroclitus
ENSVVUG00000011307	LARP1B	91	55.275	ENSGMOG00000005207	larp1b	67	56.170	Gadus_morhua
ENSVVUG00000011307	LARP1B	99	70.771	ENSGALG00000010207	LARP1B	87	71.492	Gallus_gallus
ENSVVUG00000011307	LARP1B	93	59.326	ENSGAFG00000012012	larp1b	98	59.301	Gambusia_affinis
ENSVVUG00000011307	LARP1B	99	52.344	ENSGACG00000004609	larp1b	85	54.717	Gasterosteus_aculeatus
ENSVVUG00000011307	LARP1B	99	79.561	ENSGAGG00000017209	LARP1B	87	78.896	Gopherus_agassizii
ENSVVUG00000011307	LARP1B	100	90.588	ENSGGOG00000015900	LARP1B	100	90.601	Gorilla_gorilla
ENSVVUG00000011307	LARP1B	99	56.637	ENSHBUG00000009730	larp1b	85	56.146	Haplochromis_burtoni
ENSVVUG00000011307	LARP1B	65	74.545	ENSHGLG00000013922	-	97	74.545	Heterocephalus_glaber_female
ENSVVUG00000011307	LARP1B	65	85.886	ENSHGLG00000006728	-	98	86.186	Heterocephalus_glaber_female
ENSVVUG00000011307	LARP1B	65	86.626	ENSHGLG00100014041	-	99	83.573	Heterocephalus_glaber_male
ENSVVUG00000011307	LARP1B	65	74.545	ENSHGLG00100016491	-	97	74.545	Heterocephalus_glaber_male
ENSVVUG00000011307	LARP1B	77	60.831	ENSHCOG00000000918	larp1b	96	62.319	Hippocampus_comes
ENSVVUG00000011307	LARP1B	85	61.699	ENSIPUG00000012138	larp1b	81	56.578	Ictalurus_punctatus
ENSVVUG00000011307	LARP1B	65	90.303	ENSSTOG00000008596	-	98	90.303	Ictidomys_tridecemlineatus
ENSVVUG00000011307	LARP1B	65	82.067	ENSSTOG00000021917	-	94	82.371	Ictidomys_tridecemlineatus
ENSVVUG00000011307	LARP1B	62	76.115	ENSSTOG00000034510	-	87	75.078	Ictidomys_tridecemlineatus
ENSVVUG00000011307	LARP1B	59	66.667	ENSSTOG00000033183	-	99	66.667	Ictidomys_tridecemlineatus
ENSVVUG00000011307	LARP1B	64	88.110	ENSJJAG00000022360	Larp1b	98	88.110	Jaculus_jaculus
ENSVVUG00000011307	LARP1B	99	54.788	ENSKMAG00000011589	larp1b	85	57.143	Kryptolebias_marmoratus
ENSVVUG00000011307	LARP1B	99	57.078	ENSLBEG00000005655	larp1b	85	56.873	Labrus_bergylta
ENSVVUG00000011307	LARP1B	99	72.656	ENSLACG00000015247	LARP1B	100	70.992	Latimeria_chalumnae
ENSVVUG00000011307	LARP1B	99	65.286	ENSLOCG00000010684	larp1b	94	66.736	Lepisosteus_oculatus
ENSVVUG00000011307	LARP1B	65	94.529	ENSLAFG00000008473	-	98	94.529	Loxodonta_africana
ENSVVUG00000011307	LARP1B	100	91.176	ENSMFAG00000002218	LARP1B	100	91.357	Macaca_fascicularis
ENSVVUG00000011307	LARP1B	100	91.373	ENSMMUG00000021347	LARP1B	100	91.466	Macaca_mulatta
ENSVVUG00000011307	LARP1B	90	88.424	ENSMNEG00000030406	LARP1B	100	88.424	Macaca_nemestrina
ENSVVUG00000011307	LARP1B	98	87.309	ENSMLEG00000009306	LARP1B	100	87.418	Mandrillus_leucophaeus
ENSVVUG00000011307	LARP1B	99	57.780	ENSMAMG00000000081	larp1b	87	57.911	Mastacembelus_armatus
ENSVVUG00000011307	LARP1B	78	63.757	ENSMZEG00005002545	larp1b	98	60.787	Maylandia_zebra
ENSVVUG00000011307	LARP1B	99	64.246	ENSMGAG00000004809	LARP1B	98	65.544	Meleagris_gallopavo
ENSVVUG00000011307	LARP1B	65	89.666	ENSMAUG00000007879	-	98	89.666	Mesocricetus_auratus
ENSVVUG00000011307	LARP1B	100	94.118	ENSMICG00000036111	LARP1B	100	94.912	Microcebus_murinus
ENSVVUG00000011307	LARP1B	99	69.625	ENSMICG00000028052	-	99	69.625	Microcebus_murinus
ENSVVUG00000011307	LARP1B	67	75.783	ENSMICG00000037883	-	94	76.724	Microcebus_murinus
ENSVVUG00000011307	LARP1B	50	93.385	ENSMOCG00000001490	Larp1b	93	93.385	Microtus_ochrogaster
ENSVVUG00000011307	LARP1B	99	87.671	ENSMODG00000012300	LARP1B	83	86.859	Monodelphis_domestica
ENSVVUG00000011307	LARP1B	99	57.637	ENSMALG00000003638	larp1b	85	58.760	Monopterus_albus
ENSVVUG00000011307	LARP1B	69	85.227	MGP_CAROLIEiJ_G0024962	Larp1b	98	88.754	Mus_caroli
ENSVVUG00000011307	LARP1B	65	89.970	ENSMUSG00000025762	Larp1b	98	89.970	Mus_musculus
ENSVVUG00000011307	LARP1B	65	89.362	MGP_PahariEiJ_G0026403	Larp1b	98	89.362	Mus_pahari
ENSVVUG00000011307	LARP1B	65	89.970	MGP_SPRETEiJ_G0025897	Larp1b	98	89.970	Mus_spretus
ENSVVUG00000011307	LARP1B	99	97.642	ENSMPUG00000017365	LARP1B	83	96.300	Mustela_putorius_furo
ENSVVUG00000011307	LARP1B	99	84.746	ENSMLUG00000010229	LARP1B	97	86.429	Myotis_lucifugus
ENSVVUG00000011307	LARP1B	78	57.840	ENSNBRG00000023846	larp1b	83	55.043	Neolamprologus_brichardi
ENSVVUG00000011307	LARP1B	100	90.196	ENSNLEG00000013819	LARP1B	98	92.097	Nomascus_leucogenys
ENSVVUG00000011307	LARP1B	86	81.905	ENSMEUG00000010308	LARP1B	88	81.936	Notamacropus_eugenii
ENSVVUG00000011307	LARP1B	98	71.834	ENSOPRG00000005478	LARP1B	97	75.624	Ochotona_princeps
ENSVVUG00000011307	LARP1B	65	87.538	ENSODEG00000001292	-	98	87.538	Octodon_degus
ENSVVUG00000011307	LARP1B	99	57.770	ENSONIG00000012386	larp1b	93	57.612	Oreochromis_niloticus
ENSVVUG00000011307	LARP1B	99	92.338	ENSOCUG00000013330	LARP1B	100	90.751	Oryctolagus_cuniculus
ENSVVUG00000011307	LARP1B	99	56.396	ENSORLG00000017954	larp1b	84	56.250	Oryzias_latipes
ENSVVUG00000011307	LARP1B	99	56.285	ENSORLG00020013081	larp1b	84	56.204	Oryzias_latipes_hni
ENSVVUG00000011307	LARP1B	99	57.031	ENSORLG00015009580	larp1b	84	57.021	Oryzias_latipes_hsok
ENSVVUG00000011307	LARP1B	99	56.726	ENSOMEG00000004210	larp1b	84	57.097	Oryzias_melastigma
ENSVVUG00000011307	LARP1B	99	90.980	ENSOGAG00000005771	LARP1B	98	91.194	Otolemur_garnettii
ENSVVUG00000011307	LARP1B	99	91.961	ENSOARG00000015300	LARP1B	100	90.939	Ovis_aries
ENSVVUG00000011307	LARP1B	100	90.000	ENSPPAG00000030439	LARP1B	100	90.492	Pan_paniscus
ENSVVUG00000011307	LARP1B	100	95.490	ENSPPRG00000002743	-	98	96.657	Panthera_pardus
ENSVVUG00000011307	LARP1B	100	95.490	ENSPTIG00000011225	LARP1B	98	96.657	Panthera_tigris_altaica
ENSVVUG00000011307	LARP1B	100	90.196	ENSPTRG00000016437	LARP1B	100	90.492	Pan_troglodytes
ENSVVUG00000011307	LARP1B	100	90.980	ENSPANG00000012488	LARP1B	100	91.247	Papio_anubis
ENSVVUG00000011307	LARP1B	99	51.498	ENSPKIG00000014360	larp1b	90	52.247	Paramormyrops_kingsleyae
ENSVVUG00000011307	LARP1B	99	78.984	ENSPSIG00000012885	LARP1B	93	80.738	Pelodiscus_sinensis
ENSVVUG00000011307	LARP1B	78	61.926	ENSPMGG00000007207	larp1b	91	60.691	Periophthalmus_magnuspinnatus
ENSVVUG00000011307	LARP1B	99	51.104	ENSPMAG00000002700	larp1b	97	53.945	Petromyzon_marinus
ENSVVUG00000011307	LARP1B	99	86.301	ENSPCIG00000026516	LARP1B	100	87.815	Phascolarctos_cinereus
ENSVVUG00000011307	LARP1B	99	52.399	ENSPFOG00000022837	-	78	52.583	Poecilia_formosa
ENSVVUG00000011307	LARP1B	99	57.159	ENSPFOG00000019519	larp1b	86	56.142	Poecilia_formosa
ENSVVUG00000011307	LARP1B	100	57.620	ENSPLAG00000007115	larp1b	86	57.620	Poecilia_latipinna
ENSVVUG00000011307	LARP1B	100	57.321	ENSPMEG00000001224	larp1b	86	57.321	Poecilia_mexicana
ENSVVUG00000011307	LARP1B	53	54.930	ENSPREG00000005955	-	89	55.634	Poecilia_reticulata
ENSVVUG00000011307	LARP1B	99	88.212	ENSPCAG00000007546	LARP1B	100	86.572	Procavia_capensis
ENSVVUG00000011307	LARP1B	100	93.333	ENSPCOG00000021874	LARP1B	99	93.836	Propithecus_coquereli
ENSVVUG00000011307	LARP1B	99	88.998	ENSPVAG00000005373	LARP1B	100	87.058	Pteropus_vampyrus
ENSVVUG00000011307	LARP1B	78	63.018	ENSPNYG00000017357	larp1b	98	60.406	Pundamilia_nyererei
ENSVVUG00000011307	LARP1B	84	61.620	ENSPNAG00000008823	larp1b	83	56.217	Pygocentrus_nattereri
ENSVVUG00000011307	LARP1B	65	91.489	ENSRNOG00000038366	Larp1b	98	91.489	Rattus_norvegicus
ENSVVUG00000011307	LARP1B	65	82.979	ENSRBIG00000038568	-	90	82.979	Rhinopithecus_bieti
ENSVVUG00000011307	LARP1B	100	89.608	ENSRBIG00000039982	-	98	90.881	Rhinopithecus_bieti
ENSVVUG00000011307	LARP1B	65	74.164	ENSRROG00000038525	-	94	74.164	Rhinopithecus_roxellana
ENSVVUG00000011307	LARP1B	100	91.176	ENSRROG00000030771	LARP1B	100	91.028	Rhinopithecus_roxellana
ENSVVUG00000011307	LARP1B	99	88.258	ENSSHAG00000014474	LARP1B	99	86.057	Sarcophilus_harrisii
ENSVVUG00000011307	LARP1B	99	55.876	ENSSMAG00000006347	larp1b	93	55.767	Scophthalmus_maximus
ENSVVUG00000011307	LARP1B	99	57.816	ENSSDUG00000004182	larp1b	85	56.813	Seriola_dumerili
ENSVVUG00000011307	LARP1B	68	70.938	ENSSLDG00000014613	larp1b	68	67.983	Seriola_lalandi_dorsalis
ENSVVUG00000011307	LARP1B	100	75.828	ENSSPUG00000011837	LARP1B	99	69.248	Sphenodon_punctatus
ENSVVUG00000011307	LARP1B	99	57.223	ENSSPAG00000017772	larp1b	87	55.666	Stegastes_partitus
ENSVVUG00000011307	LARP1B	100	91.077	ENSSSCG00000034280	LARP1B	99	94.845	Sus_scrofa
ENSVVUG00000011307	LARP1B	91	71.467	ENSTGUG00000002098	-	99	65.824	Taeniopygia_guttata
ENSVVUG00000011307	LARP1B	99	54.325	ENSTRUG00000005612	larp1b	82	56.670	Takifugu_rubripes
ENSVVUG00000011307	LARP1B	99	55.716	ENSTNIG00000012398	larp1b	94	56.324	Tetraodon_nigroviridis
ENSVVUG00000011307	LARP1B	86	88.571	ENSTBEG00000004177	LARP1B	88	88.571	Tupaia_belangeri
ENSVVUG00000011307	LARP1B	99	82.745	ENSTTRG00000012984	LARP1B	100	81.967	Tursiops_truncatus
ENSVVUG00000011307	LARP1B	65	86.018	ENSUAMG00000016938	-	88	98.160	Ursus_americanus
ENSVVUG00000011307	LARP1B	100	95.865	ENSUMAG00000007373	LARP1B	100	95.865	Ursus_maritimus
ENSVVUG00000011307	LARP1B	99	83.694	ENSVPAG00000007223	LARP1B	100	80.507	Vicugna_pacos
ENSVVUG00000011307	LARP1B	99	61.220	ENSXETG00000022512	larp1b	89	61.220	Xenopus_tropicalis
ENSVVUG00000011307	LARP1B	74	60.155	ENSXCOG00000004435	larp1b	73	59.772	Xiphophorus_couchianus
ENSVVUG00000011307	LARP1B	99	57.412	ENSXMAG00000008150	larp1b	85	57.218	Xiphophorus_maculatus