EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000011411 (Gene tree)
Gene ID: -
Gene Symbol: TSEN54
Alias: SEN54|SEN54L
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 8204 bases
Position: chrNBDQ01000032.1:12079989-12088192
Accession: 27561
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000015548	tRNA_int_end_N2	PF12928.7	1.5e-18	1	1
ENSVVUP00000015543	tRNA_int_end_N2	PF12928.7	1.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000020422	TSEN54-201	1812	-	ENSVVUP00000015543	603 (aa)	-	-
ENSVVUT00000020428	TSEN54-202	1721	-	ENSVVUP00000015548	524 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000011411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000011411's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000011411	TSEN54	98	85.049	ENSG00000182173	TSEN54	100	94.444	Homo_sapiens
ENSVVUG00000011411	TSEN54	99	45.333	ENSAPOG00000009659	tsen54	77	65.882	Acanthochromis_polyacanthus
ENSVVUG00000011411	TSEN54	98	92.023	ENSAMEG00000009414	TSEN54	97	92.203	Ailuropoda_melanoleuca
ENSVVUG00000011411	TSEN54	97	46.512	ENSAOCG00000000152	tsen54	94	45.560	Amphiprion_ocellaris
ENSVVUG00000011411	TSEN54	99	45.180	ENSAPEG00000018931	tsen54	93	44.981	Amphiprion_percula
ENSVVUG00000011411	TSEN54	99	43.478	ENSATEG00000019860	tsen54	98	41.839	Anabas_testudineus
ENSVVUG00000011411	TSEN54	87	52.495	ENSAPLG00000009419	TSEN54	100	52.495	Anas_platyrhynchos
ENSVVUG00000011411	TSEN54	97	52.896	ENSACAG00000006714	TSEN54	97	51.816	Anolis_carolinensis
ENSVVUG00000011411	TSEN54	98	85.631	ENSANAG00000024061	TSEN54	96	85.770	Aotus_nancymaae
ENSVVUG00000011411	TSEN54	97	45.401	ENSACLG00000019800	tsen54	96	45.243	Astatotilapia_calliptera
ENSVVUG00000011411	TSEN54	97	46.562	ENSAMXG00000006546	tsen54	77	65.455	Astyanax_mexicanus
ENSVVUG00000011411	TSEN54	98	85.631	ENSBTAG00000000824	TSEN54	97	85.770	Bos_taurus
ENSVVUG00000011411	TSEN54	98	84.272	ENSCJAG00000014278	TSEN54	96	84.405	Callithrix_jacchus
ENSVVUG00000011411	TSEN54	98	98.835	ENSCAFG00000004798	TSEN54	97	99.025	Canis_familiaris
ENSVVUG00000011411	TSEN54	98	98.835	ENSCAFG00020000312	TSEN54	97	99.025	Canis_lupus_dingo
ENSVVUG00000011411	TSEN54	98	83.883	ENSCHIG00000019908	TSEN54	97	83.041	Capra_hircus
ENSVVUG00000011411	TSEN54	87	83.261	ENSTSYG00000037439	TSEN54	100	83.261	Carlito_syrichta
ENSVVUG00000011411	TSEN54	98	85.049	ENSCCAG00000036624	TSEN54	96	85.185	Cebus_capucinus
ENSVVUG00000011411	TSEN54	98	85.631	ENSCATG00000042877	TSEN54	96	85.770	Cercocebus_atys
ENSVVUG00000011411	TSEN54	98	82.136	ENSCLAG00000002924	TSEN54	97	81.942	Chinchilla_lanigera
ENSVVUG00000011411	TSEN54	98	85.437	ENSCSAG00000004809	TSEN54	97	85.575	Chlorocebus_sabaeus
ENSVVUG00000011411	TSEN54	97	56.615	ENSCPBG00000028071	TSEN54	97	56.615	Chrysemys_picta_bellii
ENSVVUG00000011411	TSEN54	98	84.466	ENSCANG00000028053	TSEN54	97	84.600	Colobus_angolensis_palliatus
ENSVVUG00000011411	TSEN54	98	80.000	ENSCGRG00001020029	Tsen54	97	79.532	Cricetulus_griseus_chok1gshd
ENSVVUG00000011411	TSEN54	85	78.795	ENSCGRG00000016289	Tsen54	100	78.125	Cricetulus_griseus_crigri
ENSVVUG00000011411	TSEN54	82	38.249	ENSCSEG00000020586	tsen54	99	37.020	Cynoglossus_semilaevis
ENSVVUG00000011411	TSEN54	82	43.925	ENSDARG00000036844	tsen54	99	43.925	Danio_rerio
ENSVVUG00000011411	TSEN54	98	85.049	ENSDNOG00000018452	TSEN54	97	85.185	Dasypus_novemcinctus
ENSVVUG00000011411	TSEN54	98	82.330	ENSDORG00000004073	Tsen54	97	82.261	Dipodomys_ordii
ENSVVUG00000011411	TSEN54	98	37.218	ENSEBUG00000005203	TSEN54	95	37.121	Eptatretus_burgeri
ENSVVUG00000011411	TSEN54	98	88.350	ENSEASG00005000579	TSEN54	97	88.109	Equus_asinus_asinus
ENSVVUG00000011411	TSEN54	98	88.350	ENSECAG00000004924	TSEN54	97	88.109	Equus_caballus
ENSVVUG00000011411	TSEN54	87	83.589	ENSEEUG00000008467	TSEN54	100	83.589	Erinaceus_europaeus
ENSVVUG00000011411	TSEN54	99	44.928	ENSELUG00000017703	tsen54	92	44.022	Esox_lucius
ENSVVUG00000011411	TSEN54	98	93.010	ENSFCAG00000023712	TSEN54	97	93.177	Felis_catus
ENSVVUG00000011411	TSEN54	98	52.703	ENSFALG00000001119	TSEN54	98	52.008	Ficedula_albicollis
ENSVVUG00000011411	TSEN54	87	82.932	ENSFDAG00000019090	TSEN54	99	82.495	Fukomys_damarensis
ENSVVUG00000011411	TSEN54	97	47.358	ENSFHEG00000005470	tsen54	95	47.266	Fundulus_heteroclitus
ENSVVUG00000011411	TSEN54	75	46.061	ENSGMOG00000013146	tsen54	91	46.061	Gadus_morhua
ENSVVUG00000011411	TSEN54	96	49.312	ENSGALG00000047163	TSEN54	98	48.919	Gallus_gallus
ENSVVUG00000011411	TSEN54	97	48.134	ENSGAFG00000005111	tsen54	95	48.148	Gambusia_affinis
ENSVVUG00000011411	TSEN54	97	43.822	ENSGACG00000014987	tsen54	99	42.248	Gasterosteus_aculeatus
ENSVVUG00000011411	TSEN54	97	56.840	ENSGAGG00000006825	TSEN54	96	56.840	Gopherus_agassizii
ENSVVUG00000011411	TSEN54	98	85.547	ENSGGOG00000009417	TSEN54	100	85.380	Gorilla_gorilla
ENSVVUG00000011411	TSEN54	88	44.255	ENSHBUG00000018296	tsen54	99	37.383	Haplochromis_burtoni
ENSVVUG00000011411	TSEN54	98	83.495	ENSHGLG00000007979	TSEN54	98	82.852	Heterocephalus_glaber_female
ENSVVUG00000011411	TSEN54	98	82.524	ENSHGLG00100005497	TSEN54	98	81.888	Heterocephalus_glaber_male
ENSVVUG00000011411	TSEN54	82	42.890	ENSHCOG00000007481	tsen54	99	41.514	Hippocampus_comes
ENSVVUG00000011411	TSEN54	98	41.729	ENSIPUG00000000590	tsen54	67	63.399	Ictalurus_punctatus
ENSVVUG00000011411	TSEN54	98	79.417	ENSSTOG00000012883	TSEN54	97	78.752	Ictidomys_tridecemlineatus
ENSVVUG00000011411	TSEN54	98	81.238	ENSJJAG00000007365	Tsen54	97	80.777	Jaculus_jaculus
ENSVVUG00000011411	TSEN54	97	47.048	ENSKMAG00000006944	tsen54	96	45.402	Kryptolebias_marmoratus
ENSVVUG00000011411	TSEN54	97	43.870	ENSLBEG00000004199	tsen54	96	43.077	Labrus_bergylta
ENSVVUG00000011411	TSEN54	97	47.419	ENSLACG00000009497	TSEN54	99	46.845	Latimeria_chalumnae
ENSVVUG00000011411	TSEN54	97	47.547	ENSLOCG00000011191	tsen54	96	46.981	Lepisosteus_oculatus
ENSVVUG00000011411	TSEN54	95	83.266	ENSLAFG00000011655	TSEN54	98	80.422	Loxodonta_africana
ENSVVUG00000011411	TSEN54	98	85.631	ENSMFAG00000000712	TSEN54	97	85.770	Macaca_fascicularis
ENSVVUG00000011411	TSEN54	98	85.437	ENSMNEG00000029199	TSEN54	97	85.575	Macaca_nemestrina
ENSVVUG00000011411	TSEN54	87	85.120	ENSMLEG00000044168	TSEN54	88	85.120	Mandrillus_leucophaeus
ENSVVUG00000011411	TSEN54	97	44.531	ENSMAMG00000019773	tsen54	96	43.580	Mastacembelus_armatus
ENSVVUG00000011411	TSEN54	97	45.401	ENSMZEG00005000884	tsen54	96	45.243	Maylandia_zebra
ENSVVUG00000011411	TSEN54	99	49.618	ENSMGAG00000009556	TSEN54	99	48.807	Meleagris_gallopavo
ENSVVUG00000011411	TSEN54	98	80.583	ENSMAUG00000016838	Tsen54	97	80.117	Mesocricetus_auratus
ENSVVUG00000011411	TSEN54	98	83.883	ENSMICG00000044012	TSEN54	97	83.883	Microcebus_murinus
ENSVVUG00000011411	TSEN54	98	81.165	ENSMOCG00000021585	Tsen54	97	80.702	Microtus_ochrogaster
ENSVVUG00000011411	TSEN54	73	62.745	ENSMMOG00000020189	tsen54	85	62.745	Mola_mola
ENSVVUG00000011411	TSEN54	98	68.642	ENSMODG00000007438	TSEN54	95	68.714	Monodelphis_domestica
ENSVVUG00000011411	TSEN54	97	44.574	ENSMALG00000020573	tsen54	96	43.570	Monopterus_albus
ENSVVUG00000011411	TSEN54	98	78.835	MGP_CAROLIEiJ_G0017417	Tsen54	97	78.363	Mus_caroli
ENSVVUG00000011411	TSEN54	98	79.417	ENSMUSG00000020781	Tsen54	97	78.947	Mus_musculus
ENSVVUG00000011411	TSEN54	98	78.447	MGP_PahariEiJ_G0018547	Tsen54	97	77.973	Mus_pahari
ENSVVUG00000011411	TSEN54	98	79.417	MGP_SPRETEiJ_G0018262	Tsen54	97	78.947	Mus_spretus
ENSVVUG00000011411	TSEN54	98	91.456	ENSMPUG00000013870	TSEN54	97	91.456	Mustela_putorius_furo
ENSVVUG00000011411	TSEN54	98	84.272	ENSMLUG00000015298	TSEN54	98	83.815	Myotis_lucifugus
ENSVVUG00000011411	TSEN54	98	82.136	ENSNGAG00000015673	Tsen54	97	81.676	Nannospalax_galili
ENSVVUG00000011411	TSEN54	90	65.254	ENSMEUG00000011908	TSEN54	100	65.254	Notamacropus_eugenii
ENSVVUG00000011411	TSEN54	98	75.146	ENSOPRG00000012513	TSEN54	97	75.146	Ochotona_princeps
ENSVVUG00000011411	TSEN54	97	45.597	ENSONIG00000009543	tsen54	96	45.243	Oreochromis_niloticus
ENSVVUG00000011411	TSEN54	98	75.335	ENSOCUG00000009875	TSEN54	97	75.432	Oryctolagus_cuniculus
ENSVVUG00000011411	TSEN54	98	45.136	ENSORLG00000000852	tsen54	97	43.774	Oryzias_latipes
ENSVVUG00000011411	TSEN54	98	44.874	ENSORLG00020018221	tsen54	97	44.208	Oryzias_latipes_hni
ENSVVUG00000011411	TSEN54	98	44.894	ENSORLG00015009413	tsen54	98	44.402	Oryzias_latipes_hsok
ENSVVUG00000011411	TSEN54	97	45.686	ENSOMEG00000014402	tsen54	94	44.767	Oryzias_melastigma
ENSVVUG00000011411	TSEN54	98	80.000	ENSOGAG00000001442	TSEN54	97	80.117	Otolemur_garnettii
ENSVVUG00000011411	TSEN54	87	84.245	ENSOARG00000010361	TSEN54	100	84.245	Ovis_aries
ENSVVUG00000011411	TSEN54	96	84.263	ENSPPAG00000043519	TSEN54	100	84.861	Pan_paniscus
ENSVVUG00000011411	TSEN54	98	92.816	ENSPPRG00000009162	TSEN54	97	92.982	Panthera_pardus
ENSVVUG00000011411	TSEN54	87	91.247	ENSPTIG00000019312	TSEN54	96	91.247	Panthera_tigris_altaica
ENSVVUG00000011411	TSEN54	98	85.049	ENSPTRG00000009646	TSEN54	97	85.185	Pan_troglodytes
ENSVVUG00000011411	TSEN54	98	85.631	ENSPANG00000020133	TSEN54	97	85.631	Papio_anubis
ENSVVUG00000011411	TSEN54	97	46.223	ENSPKIG00000023018	tsen54	100	44.966	Paramormyrops_kingsleyae
ENSVVUG00000011411	TSEN54	81	52.778	ENSPSIG00000012807	TSEN54	99	51.389	Pelodiscus_sinensis
ENSVVUG00000011411	TSEN54	94	35.484	ENSPMGG00000019578	tsen54	99	35.081	Periophthalmus_magnuspinnatus
ENSVVUG00000011411	TSEN54	98	81.165	ENSPEMG00000014857	Tsen54	97	80.702	Peromyscus_maniculatus_bairdii
ENSVVUG00000011411	TSEN54	97	47.750	ENSPFOG00000022740	tsen54	95	48.155	Poecilia_formosa
ENSVVUG00000011411	TSEN54	97	47.835	ENSPLAG00000014847	tsen54	95	48.242	Poecilia_latipinna
ENSVVUG00000011411	TSEN54	97	47.638	ENSPMEG00000022876	tsen54	95	48.047	Poecilia_mexicana
ENSVVUG00000011411	TSEN54	97	47.647	ENSPREG00000013090	tsen54	95	47.441	Poecilia_reticulata
ENSVVUG00000011411	TSEN54	92	79.339	ENSPPYG00000008629	TSEN54	100	79.752	Pongo_abelii
ENSVVUG00000011411	TSEN54	93	73.306	ENSPCAG00000002093	TSEN54	96	73.306	Procavia_capensis
ENSVVUG00000011411	TSEN54	98	87.573	ENSPCOG00000027880	TSEN54	97	87.719	Propithecus_coquereli
ENSVVUG00000011411	TSEN54	98	88.738	ENSPVAG00000008446	TSEN54	97	88.889	Pteropus_vampyrus
ENSVVUG00000011411	TSEN54	94	44.622	ENSPNYG00000010217	tsen54	99	44.378	Pundamilia_nyererei
ENSVVUG00000011411	TSEN54	97	46.304	ENSPNAG00000003770	tsen54	95	45.216	Pygocentrus_nattereri
ENSVVUG00000011411	TSEN54	98	80.000	ENSRNOG00000004598	Tsen54	97	79.532	Rattus_norvegicus
ENSVVUG00000011411	TSEN54	98	85.243	ENSRBIG00000043040	TSEN54	97	85.380	Rhinopithecus_bieti
ENSVVUG00000011411	TSEN54	98	85.049	ENSRROG00000030797	TSEN54	97	85.185	Rhinopithecus_roxellana
ENSVVUG00000011411	TSEN54	98	81.748	ENSSBOG00000013543	TSEN54	96	81.871	Saimiri_boliviensis_boliviensis
ENSVVUG00000011411	TSEN54	98	66.157	ENSSHAG00000018127	TSEN54	96	66.219	Sarcophilus_harrisii
ENSVVUG00000011411	TSEN54	82	45.287	ENSSFOG00015004093	tsen54	100	44.470	Scleropages_formosus
ENSVVUG00000011411	TSEN54	97	43.595	ENSSMAG00000012449	tsen54	99	43.258	Scophthalmus_maximus
ENSVVUG00000011411	TSEN54	97	46.019	ENSSDUG00000021506	tsen54	96	45.455	Seriola_dumerili
ENSVVUG00000011411	TSEN54	97	45.631	ENSSLDG00000016303	tsen54	96	45.068	Seriola_lalandi_dorsalis
ENSVVUG00000011411	TSEN54	80	52.887	ENSSPUG00000008988	TSEN54	99	51.111	Sphenodon_punctatus
ENSVVUG00000011411	TSEN54	82	41.801	ENSSPAG00000008047	tsen54	77	60.811	Stegastes_partitus
ENSVVUG00000011411	TSEN54	94	44.715	ENSSPAG00000008098	-	99	44.512	Stegastes_partitus
ENSVVUG00000011411	TSEN54	97	90.196	ENSSSCG00000036852	TSEN54	97	89.610	Sus_scrofa
ENSVVUG00000011411	TSEN54	87	52.516	ENSTGUG00000008548	TSEN54	100	52.516	Taeniopygia_guttata
ENSVVUG00000011411	TSEN54	97	44.094	ENSTRUG00000004230	tsen54	95	43.504	Takifugu_rubripes
ENSVVUG00000011411	TSEN54	87	89.520	ENSTTRG00000015828	TSEN54	100	89.520	Tursiops_truncatus
ENSVVUG00000011411	TSEN54	82	91.628	ENSUAMG00000010045	TSEN54	100	91.628	Ursus_americanus
ENSVVUG00000011411	TSEN54	85	91.910	ENSUMAG00000008979	TSEN54	100	91.910	Ursus_maritimus
ENSVVUG00000011411	TSEN54	98	49.903	ENSXETG00000012532	tsen54	97	71.304	Xenopus_tropicalis
ENSVVUG00000011411	TSEN54	97	44.618	ENSXCOG00000018245	tsen54	99	44.444	Xiphophorus_couchianus
ENSVVUG00000011411	TSEN54	97	49.023	ENSXMAG00000018818	tsen54	95	48.047	Xiphophorus_maculatus