EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000011783 (Gene tree)
Gene ID: -
Gene Symbol: MSI2
Alias: -
Full Name: musashi RNA binding protein 2
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 388257 bases
Position: chrNBDQ01000021.1:10615551-11003807
Accession: 112917908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000016044	RRM_1	PF00076.22	5.1e-34	1	2
ENSVVUP00000016044	RRM_1	PF00076.22	5.1e-34	2	2
ENSVVUP00000016056	RRM_1	PF00076.22	6.3e-31	1	2
ENSVVUP00000016056	RRM_1	PF00076.22	6.3e-31	2	2
ENSVVUP00000016039	RRM_1	PF00076.22	9.1e-31	1	2
ENSVVUP00000016039	RRM_1	PF00076.22	9.1e-31	2	2
ENSVVUP00000016018	RRM_1	PF00076.22	1e-30	1	2
ENSVVUP00000016018	RRM_1	PF00076.22	1e-30	2	2
ENSVVUP00000016032	RRM_1	PF00076.22	1e-30	1	2
ENSVVUP00000016032	RRM_1	PF00076.22	1e-30	2	2
ENSVVUP00000016024	RRM_1	PF00076.22	1e-30	1	2
ENSVVUP00000016024	RRM_1	PF00076.22	1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000021095	MSI2-203	1665	-	ENSVVUP00000016032	452 (aa)	-	-
ENSVVUT00000021124	MSI2-206	1108	-	ENSVVUP00000016056	365 (aa)	-	-
ENSVVUT00000021071	MSI2-201	1808	-	ENSVVUP00000016018	434 (aa)	-	-
ENSVVUT00000021077	MSI2-202	1524	-	ENSVVUP00000016024	438 (aa)	-	-
ENSVVUT00000021111	MSI2-205	1082	-	ENSVVUP00000016044	346 (aa)	XP_025851779	UPI000040B05D
ENSVVUT00000021105	MSI2-204	1579	-	ENSVVUP00000016039	413 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000011783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000011783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000011783	MSI2	67	40.773	ENSVVUG00000013596	-	76	42.437
ENSVVUG00000011783	MSI2	50	42.857	ENSVVUG00000014202	-	91	35.106
ENSVVUG00000011783	MSI2	53	48.227	ENSVVUG00000002657	-	89	48.227
ENSVVUG00000011783	MSI2	53	35.052	ENSVVUG00000014827	-	75	32.536
ENSVVUG00000011783	MSI2	61	38.750	ENSVVUG00000001421	-	96	36.170
ENSVVUG00000011783	MSI2	53	49.189	ENSVVUG00000024653	HNRNPDL	59	45.622
ENSVVUG00000011783	MSI2	50	48.276	ENSVVUG00000024658	HNRNPD	85	39.450
ENSVVUG00000011783	MSI2	50	43.169	ENSVVUG00000012651	-	97	34.375
ENSVVUG00000011783	MSI2	54	49.198	ENSVVUG00000001047	-	72	48.039
ENSVVUG00000011783	MSI2	51	43.243	ENSVVUG00000017670	RBM3	95	44.444
ENSVVUG00000011783	MSI2	83	32.877	ENSVVUG00000027110	TARDBP	53	31.928
ENSVVUG00000011783	MSI2	51	39.674	ENSVVUG00000012340	-	88	35.484
ENSVVUG00000011783	MSI2	50	41.279	ENSVVUG00000000484	HNRNPA2B1	85	40.230
ENSVVUG00000011783	MSI2	94	71.733	ENSVVUG00000020993	MSI1	100	69.018
ENSVVUG00000011783	MSI2	52	50.000	ENSVVUG00000024413	-	73	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000011783	MSI2	100	98.671	ENSG00000153944	MSI2	100	100.000	Homo_sapiens
ENSVVUG00000011783	MSI2	98	92.411	ENSAPOG00000001658	msi2a	100	87.749	Acanthochromis_polyacanthus
ENSVVUG00000011783	MSI2	94	100.000	ENSAMEG00000002697	MSI2	99	100.000	Ailuropoda_melanoleuca
ENSVVUG00000011783	MSI2	100	74.745	ENSACIG00000009475	msi2a	100	74.745	Amphilophus_citrinellus
ENSVVUG00000011783	MSI2	55	76.667	ENSAOCG00000014822	msi2a	64	85.841	Amphiprion_ocellaris
ENSVVUG00000011783	MSI2	97	91.705	ENSAPEG00000007706	msi2a	100	87.749	Amphiprion_percula
ENSVVUG00000011783	MSI2	98	92.411	ENSATEG00000010498	msi2a	100	87.749	Anabas_testudineus
ENSVVUG00000011783	MSI2	94	87.500	ENSATEG00000003301	-	100	93.165	Anabas_testudineus
ENSVVUG00000011783	MSI2	68	98.901	ENSACAG00000005452	MSI2	74	95.455	Anolis_carolinensis
ENSVVUG00000011783	MSI2	100	98.671	ENSANAG00000037827	MSI2	100	98.671	Aotus_nancymaae
ENSVVUG00000011783	MSI2	98	91.964	ENSACLG00000007752	msi2a	100	87.464	Astatotilapia_calliptera
ENSVVUG00000011783	MSI2	100	95.890	ENSAMXG00000010474	msi2b	100	95.876	Astyanax_mexicanus
ENSVVUG00000011783	MSI2	100	93.709	ENSAMXG00000032796	msi2a	100	92.808	Astyanax_mexicanus
ENSVVUG00000011783	MSI2	100	98.339	ENSBTAG00000004406	MSI2	100	98.339	Bos_taurus
ENSVVUG00000011783	MSI2	68	60.643	WBGene00003423	msi-1	76	60.643	Caenorhabditis_elegans
ENSVVUG00000011783	MSI2	100	98.671	ENSCJAG00000013998	MSI2	100	98.671	Callithrix_jacchus
ENSVVUG00000011783	MSI2	94	98.746	ENSCAFG00020025620	MSI2	100	98.013	Canis_lupus_dingo
ENSVVUG00000011783	MSI2	100	98.339	ENSCHIG00000016580	MSI2	100	98.339	Capra_hircus
ENSVVUG00000011783	MSI2	94	89.667	ENSCPOG00000034042	MSI2	99	95.390	Cavia_porcellus
ENSVVUG00000011783	MSI2	100	98.671	ENSCCAG00000033927	MSI2	100	98.671	Cebus_capucinus
ENSVVUG00000011783	MSI2	97	98.671	ENSCATG00000040879	MSI2	100	98.671	Cercocebus_atys
ENSVVUG00000011783	MSI2	100	100.000	ENSCLAG00000014325	MSI2	100	100.000	Chinchilla_lanigera
ENSVVUG00000011783	MSI2	100	98.671	ENSCSAG00000005633	MSI2	100	98.671	Chlorocebus_sabaeus
ENSVVUG00000011783	MSI2	71	100.000	ENSCHOG00000008660	MSI2	83	100.000	Choloepus_hoffmanni
ENSVVUG00000011783	MSI2	100	99.010	ENSCPBG00000009942	MSI2	96	93.688	Chrysemys_picta_bellii
ENSVVUG00000011783	MSI2	60	72.000	ENSCING00000018579	-	97	52.915	Ciona_intestinalis
ENSVVUG00000011783	MSI2	62	66.667	ENSCSAVG00000010397	-	94	53.571	Ciona_savignyi
ENSVVUG00000011783	MSI2	94	100.000	ENSCANG00000036414	MSI2	100	100.000	Colobus_angolensis_palliatus
ENSVVUG00000011783	MSI2	100	98.344	ENSCGRG00001013330	Msi2	100	98.344	Cricetulus_griseus_chok1gshd
ENSVVUG00000011783	MSI2	94	99.693	ENSCGRG00000003141	Msi2	100	99.693	Cricetulus_griseus_crigri
ENSVVUG00000011783	MSI2	79	69.340	ENSCSEG00000013557	msi2a	83	74.603	Cynoglossus_semilaevis
ENSVVUG00000011783	MSI2	100	75.723	ENSCSEG00000003266	-	100	75.723	Cynoglossus_semilaevis
ENSVVUG00000011783	MSI2	53	88.235	ENSCSEG00000013549	msi2a	100	87.879	Cynoglossus_semilaevis
ENSVVUG00000011783	MSI2	98	91.324	ENSCVAG00000017075	msi2a	100	87.464	Cyprinodon_variegatus
ENSVVUG00000011783	MSI2	97	94.470	ENSDARG00000032614	msi2b	100	98.020	Danio_rerio
ENSVVUG00000011783	MSI2	97	91.244	ENSDARG00000033901	msi2a	100	79.639	Danio_rerio
ENSVVUG00000011783	MSI2	94	94.118	ENSDNOG00000014501	MSI2	100	100.000	Dasypus_novemcinctus
ENSVVUG00000011783	MSI2	79	81.395	ENSDORG00000005394	Msi2	84	87.817	Dipodomys_ordii
ENSVVUG00000011783	MSI2	97	59.104	FBgn0260943	Rbp6	90	67.347	Drosophila_melanogaster
ENSVVUG00000011783	MSI2	64	76.316	ENSETEG00000012450	-	64	76.316	Echinops_telfairi
ENSVVUG00000011783	MSI2	89	68.810	ENSEBUG00000006732	msi2a	87	68.489	Eptatretus_burgeri
ENSVVUG00000011783	MSI2	100	90.112	ENSEASG00005002965	MSI2	100	90.112	Equus_asinus_asinus
ENSVVUG00000011783	MSI2	100	97.458	ENSECAG00000011435	MSI2	100	97.458	Equus_caballus
ENSVVUG00000011783	MSI2	83	79.705	ENSEEUG00000007810	MSI2	100	85.375	Erinaceus_europaeus
ENSVVUG00000011783	MSI2	97	94.712	ENSELUG00000001361	msi2b	100	87.429	Esox_lucius
ENSVVUG00000011783	MSI2	100	94.521	ENSELUG00000011747	msi2a	93	94.502	Esox_lucius
ENSVVUG00000011783	MSI2	100	98.671	ENSFCAG00000041686	MSI2	100	98.671	Felis_catus
ENSVVUG00000011783	MSI2	82	82.258	ENSFCAG00000033787	-	82	82.353	Felis_catus
ENSVVUG00000011783	MSI2	94	100.000	ENSFDAG00000016118	MSI2	100	100.000	Fukomys_damarensis
ENSVVUG00000011783	MSI2	98	92.411	ENSFHEG00000000084	msi2a	96	94.783	Fundulus_heteroclitus
ENSVVUG00000011783	MSI2	53	93.269	ENSGMOG00000007596	-	100	95.522	Gadus_morhua
ENSVVUG00000011783	MSI2	100	96.532	ENSGALG00000005567	MSI2	100	96.532	Gallus_gallus
ENSVVUG00000011783	MSI2	82	92.800	ENSGAFG00000006974	msi2a	90	95.614	Gambusia_affinis
ENSVVUG00000011783	MSI2	94	96.053	ENSGAGG00000016542	MSI2	100	96.053	Gopherus_agassizii
ENSVVUG00000011783	MSI2	94	100.000	ENSGGOG00000013182	MSI2	100	100.000	Gorilla_gorilla
ENSVVUG00000011783	MSI2	98	91.964	ENSHBUG00000020800	msi2a	100	87.464	Haplochromis_burtoni
ENSVVUG00000011783	MSI2	100	91.040	ENSHGLG00000012444	MSI2	99	100.000	Heterocephalus_glaber_female
ENSVVUG00000011783	MSI2	76	100.000	ENSHGLG00100003744	MSI2	100	100.000	Heterocephalus_glaber_male
ENSVVUG00000011783	MSI2	98	91.964	ENSHCOG00000000266	msi2a	97	85.088	Hippocampus_comes
ENSVVUG00000011783	MSI2	76	81.369	ENSHCOG00000017241	-	77	81.967	Hippocampus_comes
ENSVVUG00000011783	MSI2	97	94.931	ENSIPUG00000003732	msi2b	92	95.683	Ictalurus_punctatus
ENSVVUG00000011783	MSI2	100	94.178	ENSIPUG00000021097	msi2a	100	87.973	Ictalurus_punctatus
ENSVVUG00000011783	MSI2	94	89.667	ENSSTOG00000007884	MSI2	99	95.390	Ictidomys_tridecemlineatus
ENSVVUG00000011783	MSI2	76	88.889	ENSJJAG00000006292	-	100	88.406	Jaculus_jaculus
ENSVVUG00000011783	MSI2	97	91.244	ENSKMAG00000009494	msi2a	96	92.058	Kryptolebias_marmoratus
ENSVVUG00000011783	MSI2	98	92.411	ENSLBEG00000007061	msi2a	93	93.127	Labrus_bergylta
ENSVVUG00000011783	MSI2	94	68.915	ENSLBEG00000026223	-	100	68.915	Labrus_bergylta
ENSVVUG00000011783	MSI2	97	94.470	ENSLOCG00000004675	msi2b	100	87.879	Lepisosteus_oculatus
ENSVVUG00000011783	MSI2	94	100.000	ENSMFAG00000003775	MSI2	100	100.000	Macaca_fascicularis
ENSVVUG00000011783	MSI2	94	100.000	ENSMMUG00000002069	MSI2	100	100.000	Macaca_mulatta
ENSVVUG00000011783	MSI2	100	98.671	ENSMNEG00000045275	MSI2	100	98.671	Macaca_nemestrina
ENSVVUG00000011783	MSI2	94	100.000	ENSMLEG00000033888	MSI2	100	100.000	Mandrillus_leucophaeus
ENSVVUG00000011783	MSI2	97	93.750	ENSMAMG00000002488	-	99	95.614	Mastacembelus_armatus
ENSVVUG00000011783	MSI2	98	92.411	ENSMAMG00000010503	msi2a	100	86.254	Mastacembelus_armatus
ENSVVUG00000011783	MSI2	100	91.694	ENSMZEG00005007676	msi2a	100	92.784	Maylandia_zebra
ENSVVUG00000011783	MSI2	100	99.424	ENSMAUG00000003862	Msi2	100	99.424	Mesocricetus_auratus
ENSVVUG00000011783	MSI2	100	76.945	ENSMICG00000032913	-	100	77.703	Microcebus_murinus
ENSVVUG00000011783	MSI2	100	98.671	ENSMICG00000013598	-	100	98.671	Microcebus_murinus
ENSVVUG00000011783	MSI2	100	99.711	ENSMOCG00000005820	Msi2	100	99.711	Microtus_ochrogaster
ENSVVUG00000011783	MSI2	97	83.566	ENSMMOG00000008348	msi2a	95	86.207	Mola_mola
ENSVVUG00000011783	MSI2	76	98.551	ENSMODG00000014790	MSI2	100	98.551	Monodelphis_domestica
ENSVVUG00000011783	MSI2	98	91.324	ENSMALG00000000071	msi2a	100	94.828	Monopterus_albus
ENSVVUG00000011783	MSI2	100	99.711	MGP_CAROLIEiJ_G0016948	Msi2	100	100.000	Mus_caroli
ENSVVUG00000011783	MSI2	100	99.711	ENSMUSG00000069769	Msi2	100	100.000	Mus_musculus
ENSVVUG00000011783	MSI2	100	99.711	MGP_PahariEiJ_G0018079	Msi2	100	100.000	Mus_pahari
ENSVVUG00000011783	MSI2	100	99.711	MGP_SPRETEiJ_G0017795	Msi2	100	100.000	Mus_spretus
ENSVVUG00000011783	MSI2	100	98.671	ENSMPUG00000015377	MSI2	100	98.671	Mustela_putorius_furo
ENSVVUG00000011783	MSI2	100	98.671	ENSMLUG00000007865	MSI2	100	98.671	Myotis_lucifugus
ENSVVUG00000011783	MSI2	100	99.711	ENSNGAG00000017807	Msi2	100	99.711	Nannospalax_galili
ENSVVUG00000011783	MSI2	97	91.244	ENSNBRG00000014596	msi2a	92	95.652	Neolamprologus_brichardi
ENSVVUG00000011783	MSI2	94	100.000	ENSNLEG00000008059	MSI2	100	100.000	Nomascus_leucogenys
ENSVVUG00000011783	MSI2	64	88.816	ENSOPRG00000000872	-	64	88.816	Ochotona_princeps
ENSVVUG00000011783	MSI2	100	100.000	ENSODEG00000011974	MSI2	100	100.000	Octodon_degus
ENSVVUG00000011783	MSI2	82	92.742	ENSONIG00000001972	msi2a	84	95.614	Oreochromis_niloticus
ENSVVUG00000011783	MSI2	93	95.745	ENSOANG00000005667	MSI2	86	91.429	Ornithorhynchus_anatinus
ENSVVUG00000011783	MSI2	100	98.671	ENSOCUG00000010440	MSI2	100	98.671	Oryctolagus_cuniculus
ENSVVUG00000011783	MSI2	98	91.324	ENSORLG00000009671	msi2a	95	93.141	Oryzias_latipes
ENSVVUG00000011783	MSI2	100	92.593	ENSORLG00020021556	msi2a	100	87.419	Oryzias_latipes_hni
ENSVVUG00000011783	MSI2	98	91.324	ENSORLG00015004592	msi2a	95	93.141	Oryzias_latipes_hsok
ENSVVUG00000011783	MSI2	98	91.324	ENSOMEG00000000146	msi2a	100	86.254	Oryzias_melastigma
ENSVVUG00000011783	MSI2	94	90.154	ENSOGAG00000005621	MSI2	99	95.189	Otolemur_garnettii
ENSVVUG00000011783	MSI2	94	100.000	ENSPPAG00000037697	MSI2	100	100.000	Pan_paniscus
ENSVVUG00000011783	MSI2	94	94.462	ENSPPRG00000001848	MSI2	96	100.000	Panthera_pardus
ENSVVUG00000011783	MSI2	99	82.456	ENSPTIG00000021873	-	98	82.511	Panthera_tigris_altaica
ENSVVUG00000011783	MSI2	94	100.000	ENSPTIG00000021678	MSI2	96	100.000	Panthera_tigris_altaica
ENSVVUG00000011783	MSI2	94	100.000	ENSPTRG00000009437	MSI2	100	100.000	Pan_troglodytes
ENSVVUG00000011783	MSI2	100	98.671	ENSPANG00000022319	MSI2	100	98.671	Papio_anubis
ENSVVUG00000011783	MSI2	98	89.954	ENSPKIG00000007038	-	96	85.666	Paramormyrops_kingsleyae
ENSVVUG00000011783	MSI2	100	97.468	ENSPSIG00000008618	MSI2	87	96.642	Pelodiscus_sinensis
ENSVVUG00000011783	MSI2	100	82.948	ENSPMGG00000005888	msi2a	93	92.440	Periophthalmus_magnuspinnatus
ENSVVUG00000011783	MSI2	100	95.480	ENSPCIG00000006063	MSI2	100	95.480	Phascolarctos_cinereus
ENSVVUG00000011783	MSI2	54	91.429	ENSPFOG00000019337	MSI2	92	92.647	Poecilia_formosa
ENSVVUG00000011783	MSI2	54	92.661	ENSPLAG00000000436	msi2a	72	95.960	Poecilia_latipinna
ENSVVUG00000011783	MSI2	55	79.720	ENSPMEG00000013247	msi2a	80	79.720	Poecilia_mexicana
ENSVVUG00000011783	MSI2	98	92.411	ENSPREG00000000881	msi2a	92	90.378	Poecilia_reticulata
ENSVVUG00000011783	MSI2	94	89.844	ENSPPYG00000008244	-	100	96.639	Pongo_abelii
ENSVVUG00000011783	MSI2	74	65.625	ENSPCAG00000010552	MSI2	100	70.588	Procavia_capensis
ENSVVUG00000011783	MSI2	72	96.774	ENSPCOG00000019195	-	100	100.000	Propithecus_coquereli
ENSVVUG00000011783	MSI2	94	85.531	ENSPVAG00000017053	MSI2	99	90.722	Pteropus_vampyrus
ENSVVUG00000011783	MSI2	100	91.694	ENSPNYG00000018393	msi2a	100	92.784	Pundamilia_nyererei
ENSVVUG00000011783	MSI2	100	94.881	ENSPNAG00000014957	msi2a	100	93.151	Pygocentrus_nattereri
ENSVVUG00000011783	MSI2	100	95.222	ENSPNAG00000000844	msi2b	93	93.493	Pygocentrus_nattereri
ENSVVUG00000011783	MSI2	94	93.919	ENSRNOG00000025338	Msi2	100	100.000	Rattus_norvegicus
ENSVVUG00000011783	MSI2	94	100.000	ENSSBOG00000026425	MSI2	100	100.000	Saimiri_boliviensis_boliviensis
ENSVVUG00000011783	MSI2	94	98.765	ENSSHAG00000008672	MSI2	100	98.765	Sarcophilus_harrisii
ENSVVUG00000011783	MSI2	100	62.935	ENSSFOG00015012168	msi2b	82	82.449	Scleropages_formosus
ENSVVUG00000011783	MSI2	94	84.615	ENSSFOG00015021687	-	97	90.000	Scleropages_formosus
ENSVVUG00000011783	MSI2	98	92.411	ENSSMAG00000018484	msi2a	100	87.749	Scophthalmus_maximus
ENSVVUG00000011783	MSI2	98	92.411	ENSSDUG00000014507	msi2a	100	87.749	Seriola_dumerili
ENSVVUG00000011783	MSI2	100	82.370	ENSSDUG00000021968	-	99	94.737	Seriola_dumerili
ENSVVUG00000011783	MSI2	98	92.411	ENSSLDG00000017172	msi2a	93	93.127	Seriola_lalandi_dorsalis
ENSVVUG00000011783	MSI2	82	92.366	ENSSPUG00000000913	-	94	95.041	Sphenodon_punctatus
ENSVVUG00000011783	MSI2	98	92.411	ENSSPAG00000017793	msi2a	89	92.969	Stegastes_partitus
ENSVVUG00000011783	MSI2	100	98.671	ENSSSCG00000038505	MSI2	100	98.671	Sus_scrofa
ENSVVUG00000011783	MSI2	76	99.034	ENSTGUG00000008452	MSI2	100	99.034	Taeniopygia_guttata
ENSVVUG00000011783	MSI2	97	91.705	ENSTRUG00000021248	msi2a	100	82.436	Takifugu_rubripes
ENSVVUG00000011783	MSI2	70	82.645	ENSTBEG00000001241	MSI2	73	82.645	Tupaia_belangeri
ENSVVUG00000011783	MSI2	94	84.375	ENSTTRG00000002189	MSI2	100	90.756	Tursiops_truncatus
ENSVVUG00000011783	MSI2	100	98.671	ENSUAMG00000000700	MSI2	100	98.671	Ursus_americanus
ENSVVUG00000011783	MSI2	90	86.219	ENSUMAG00000000505	MSI2	95	100.000	Ursus_maritimus
ENSVVUG00000011783	MSI2	53	84.615	ENSVPAG00000006837	-	62	84.615	Vicugna_pacos
ENSVVUG00000011783	MSI2	96	91.905	ENSXCOG00000006113	msi2a	100	78.238	Xiphophorus_couchianus
ENSVVUG00000011783	MSI2	98	92.411	ENSXMAG00000000608	msi2a	100	87.464	Xiphophorus_maculatus