EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000011842 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 45582 bases
Position: chrNBDQ01000010.1:30177748-30223329
Accession: 112914912
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000016098	MRP-S32	PF10210.9	5.6e-41	1	1
ENSVVUP00000016095	MRP-S32	PF10210.9	2.6e-35	1	1
ENSVVUP00000016093	MRP-S32	PF10210.9	3.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000021168	-	1486	-	ENSVVUP00000016093	174 (aa)	-	-
ENSVVUT00000021171	-	1422	-	ENSVVUP00000016095	146 (aa)	-	-
ENSVVUT00000021174	-	1353	-	ENSVVUP00000016098	142 (aa)	XP_025848010	UPI000DF6C3BE

Gene Model

Click here to download ENSVVUG00000011842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000011842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000011842	-	53	98.667	ENSVVUG00000007253	-	96	98.667
ENSVVUG00000011842	-	54	94.737	ENSVVUG00000002834	-	94	94.737

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000011842	-	100	85.915	ENSG00000198015	MRPL42	100	87.500	Homo_sapiens
ENSVVUG00000011842	-	74	93.333	ENSAMEG00000009832	MRPL42	83	93.333	Ailuropoda_melanoleuca
ENSVVUG00000011842	-	68	66.667	ENSACIG00000017826	mrpl42	69	66.667	Amphilophus_citrinellus
ENSVVUG00000011842	-	97	64.029	ENSAPLG00000015057	MRPL42	97	64.029	Anas_platyrhynchos
ENSVVUG00000011842	-	70	84.000	ENSANAG00000036083	-	84	84.000	Aotus_nancymaae
ENSVVUG00000011842	-	89	78.740	ENSANAG00000033101	-	87	76.515	Aotus_nancymaae
ENSVVUG00000011842	-	90	80.469	ENSANAG00000000692	-	91	80.469	Aotus_nancymaae
ENSVVUG00000011842	-	100	80.282	ENSANAG00000036935	-	100	80.282	Aotus_nancymaae
ENSVVUG00000011842	-	100	89.437	ENSBTAG00000002708	MRPL42	100	89.437	Bos_taurus
ENSVVUG00000011842	-	75	75.472	ENSBTAG00000052971	-	97	75.472	Bos_taurus
ENSVVUG00000011842	-	100	84.507	ENSCJAG00000046971	MRPL42	100	84.507	Callithrix_jacchus
ENSVVUG00000011842	-	54	85.714	ENSCAFG00000030257	-	93	85.714	Canis_familiaris
ENSVVUG00000011842	-	69	98.020	ENSCAFG00020022967	-	89	98.020	Canis_lupus_dingo
ENSVVUG00000011842	-	51	95.890	ENSCAFG00020016271	-	97	95.890	Canis_lupus_dingo
ENSVVUG00000011842	-	90	89.844	ENSCHIG00000014921	MRPL42	100	89.844	Capra_hircus
ENSVVUG00000011842	-	73	83.654	ENSTSYG00000032810	-	95	83.654	Carlito_syrichta
ENSVVUG00000011842	-	100	88.028	ENSTSYG00000006370	-	100	88.028	Carlito_syrichta
ENSVVUG00000011842	-	92	82.443	ENSTSYG00000036466	-	90	82.443	Carlito_syrichta
ENSVVUG00000011842	-	100	69.014	ENSCAPG00000015105	-	100	69.014	Cavia_aperea
ENSVVUG00000011842	-	84	86.555	ENSCAPG00000016985	-	89	86.555	Cavia_aperea
ENSVVUG00000011842	-	100	69.718	ENSCPOG00000008943	-	100	69.718	Cavia_porcellus
ENSVVUG00000011842	-	96	85.294	ENSCPOG00000030015	-	98	84.397	Cavia_porcellus
ENSVVUG00000011842	-	90	66.406	ENSCCAG00000029290	-	86	64.662	Cebus_capucinus
ENSVVUG00000011842	-	100	84.507	ENSCCAG00000031179	-	100	84.507	Cebus_capucinus
ENSVVUG00000011842	-	89	81.890	ENSCCAG00000032203	-	77	81.890	Cebus_capucinus
ENSVVUG00000011842	-	100	88.028	ENSCATG00000037616	MRPL42	100	88.028	Cercocebus_atys
ENSVVUG00000011842	-	100	84.507	ENSCLAG00000005421	MRPL42	100	84.507	Chinchilla_lanigera
ENSVVUG00000011842	-	100	85.915	ENSCSAG00000003706	MRPL42	100	85.915	Chlorocebus_sabaeus
ENSVVUG00000011842	-	83	48.305	ENSCHOG00000007010	-	100	48.305	Choloepus_hoffmanni
ENSVVUG00000011842	-	100	66.892	ENSCPBG00000001581	MRPL42	100	66.892	Chrysemys_picta_bellii
ENSVVUG00000011842	-	100	87.324	ENSCANG00000033457	MRPL42	100	87.324	Colobus_angolensis_palliatus
ENSVVUG00000011842	-	98	65.468	ENSCGRG00001003813	-	98	65.468	Cricetulus_griseus_chok1gshd
ENSVVUG00000011842	-	100	77.465	ENSCGRG00001012694	-	99	77.465	Cricetulus_griseus_chok1gshd
ENSVVUG00000011842	-	98	79.137	ENSCGRG00000003801	Mrpl42	99	79.137	Cricetulus_griseus_crigri
ENSVVUG00000011842	-	100	77.465	ENSDNOG00000049701	-	100	77.465	Dasypus_novemcinctus
ENSVVUG00000011842	-	100	80.986	ENSDNOG00000032710	-	100	80.986	Dasypus_novemcinctus
ENSVVUG00000011842	-	98	83.453	ENSDORG00000015571	Mrpl42	99	83.453	Dipodomys_ordii
ENSVVUG00000011842	-	87	58.871	ENSETEG00000014745	-	92	58.871	Echinops_telfairi
ENSVVUG00000011842	-	100	92.254	ENSEASG00005019361	MRPL42	100	92.254	Equus_asinus_asinus
ENSVVUG00000011842	-	100	92.254	ENSECAG00000026888	MRPL42	100	92.254	Equus_caballus
ENSVVUG00000011842	-	100	93.662	ENSFCAG00000037907	-	100	93.662	Felis_catus
ENSVVUG00000011842	-	87	91.129	ENSFCAG00000040567	-	100	91.129	Felis_catus
ENSVVUG00000011842	-	89	73.228	ENSFCAG00000036356	-	87	68.841	Felis_catus
ENSVVUG00000011842	-	94	66.897	ENSFALG00000010717	MRPL42	99	66.897	Ficedula_albicollis
ENSVVUG00000011842	-	98	81.295	ENSFDAG00000018129	MRPL42	99	81.295	Fukomys_damarensis
ENSVVUG00000011842	-	94	63.448	ENSGALG00000011293	MRPL42	99	63.448	Gallus_gallus
ENSVVUG00000011842	-	100	67.568	ENSGAGG00000010125	MRPL42	100	67.568	Gopherus_agassizii
ENSVVUG00000011842	-	100	85.915	ENSGGOG00000022760	MRPL42	100	85.915	Gorilla_gorilla
ENSVVUG00000011842	-	87	82.114	ENSHGLG00000008248	-	100	82.114	Heterocephalus_glaber_female
ENSVVUG00000011842	-	86	85.246	ENSHGLG00000007399	-	93	84.921	Heterocephalus_glaber_female
ENSVVUG00000011842	-	85	81.818	ENSHGLG00100013257	-	98	81.818	Heterocephalus_glaber_male
ENSVVUG00000011842	-	87	85.484	ENSHGLG00100018317	-	87	85.484	Heterocephalus_glaber_male
ENSVVUG00000011842	-	100	79.577	ENSSTOG00000026544	MRPL42	100	79.577	Ictidomys_tridecemlineatus
ENSVVUG00000011842	-	87	69.919	ENSLACG00000006919	MRPL42	84	69.919	Latimeria_chalumnae
ENSVVUG00000011842	-	84	86.555	ENSLAFG00000013779	MRPL42	85	86.555	Loxodonta_africana
ENSVVUG00000011842	-	100	86.620	ENSMFAG00000032330	MRPL42	100	86.620	Macaca_fascicularis
ENSVVUG00000011842	-	100	84.507	ENSMMUG00000016805	MRPL42	100	84.507	Macaca_mulatta
ENSVVUG00000011842	-	100	86.620	ENSMNEG00000028853	MRPL42	100	86.620	Macaca_nemestrina
ENSVVUG00000011842	-	100	87.324	ENSMLEG00000038104	MRPL42	100	87.324	Mandrillus_leucophaeus
ENSVVUG00000011842	-	94	63.448	ENSMGAG00000011346	MRPL42	99	63.448	Meleagris_gallopavo
ENSVVUG00000011842	-	98	72.662	ENSMAUG00000010057	-	99	72.662	Mesocricetus_auratus
ENSVVUG00000011842	-	98	63.309	ENSMAUG00000018130	-	98	63.309	Mesocricetus_auratus
ENSVVUG00000011842	-	100	85.211	ENSMICG00000032596	-	100	85.211	Microcebus_murinus
ENSVVUG00000011842	-	67	84.211	ENSMICG00000045594	-	96	84.211	Microcebus_murinus
ENSVVUG00000011842	-	68	83.333	ENSMICG00000028094	-	84	88.750	Microcebus_murinus
ENSVVUG00000011842	-	93	84.091	ENSMICG00000035189	-	92	84.091	Microcebus_murinus
ENSVVUG00000011842	-	88	84.800	ENSMICG00000036541	-	99	83.019	Microcebus_murinus
ENSVVUG00000011842	-	98	79.856	ENSMOCG00000013541	-	99	79.856	Microtus_ochrogaster
ENSVVUG00000011842	-	98	76.259	ENSMOCG00000004616	-	99	76.259	Microtus_ochrogaster
ENSVVUG00000011842	-	98	78.571	MGP_CAROLIEiJ_G0015750	Mrpl42	99	78.571	Mus_caroli
ENSVVUG00000011842	-	98	77.857	ENSMUSG00000062981	Mrpl42	91	87.143	Mus_musculus
ENSVVUG00000011842	-	100	83.099	ENSMLUG00000029623	-	100	83.099	Myotis_lucifugus
ENSVVUG00000011842	-	100	80.986	ENSMLUG00000023702	-	100	80.986	Myotis_lucifugus
ENSVVUG00000011842	-	99	84.286	ENSMLUG00000025058	-	99	84.286	Myotis_lucifugus
ENSVVUG00000011842	-	90	85.156	ENSNGAG00000000717	Mrpl42	100	85.156	Nannospalax_galili
ENSVVUG00000011842	-	100	85.915	ENSNLEG00000005699	MRPL42	100	85.915	Nomascus_leucogenys
ENSVVUG00000011842	-	83	44.068	ENSMEUG00000008043	-	100	44.068	Notamacropus_eugenii
ENSVVUG00000011842	-	100	80.282	ENSOPRG00000010967	MRPL42	100	80.282	Ochotona_princeps
ENSVVUG00000011842	-	83	84.874	ENSODEG00000008681	-	100	84.874	Octodon_degus
ENSVVUG00000011842	-	99	71.127	ENSODEG00000016452	-	99	72.535	Octodon_degus
ENSVVUG00000011842	-	100	75.524	ENSODEG00000012689	-	100	76.923	Octodon_degus
ENSVVUG00000011842	-	100	83.099	ENSOCUG00000010928	MRPL42	100	83.099	Oryctolagus_cuniculus
ENSVVUG00000011842	-	100	84.507	ENSOGAG00000025686	-	100	84.507	Otolemur_garnettii
ENSVVUG00000011842	-	100	78.873	ENSOGAG00000026395	-	100	78.873	Otolemur_garnettii
ENSVVUG00000011842	-	100	76.761	ENSOGAG00000024156	-	100	76.761	Otolemur_garnettii
ENSVVUG00000011842	-	98	76.259	ENSOGAG00000030438	-	99	76.259	Otolemur_garnettii
ENSVVUG00000011842	-	100	78.873	ENSOGAG00000034004	-	100	78.873	Otolemur_garnettii
ENSVVUG00000011842	-	100	85.915	ENSOGAG00000025600	-	100	85.915	Otolemur_garnettii
ENSVVUG00000011842	-	100	79.577	ENSOGAG00000027617	-	100	79.577	Otolemur_garnettii
ENSVVUG00000011842	-	90	90.625	ENSOARG00000015849	MRPL42	100	90.625	Ovis_aries
ENSVVUG00000011842	-	100	84.507	ENSPPAG00000038254	MRPL42	100	84.507	Pan_paniscus
ENSVVUG00000011842	-	100	92.254	ENSPPRG00000015755	-	100	92.254	Panthera_pardus
ENSVVUG00000011842	-	100	92.958	ENSPPRG00000013218	-	100	92.958	Panthera_pardus
ENSVVUG00000011842	-	89	72.441	ENSPPRG00000006533	-	87	68.841	Panthera_pardus
ENSVVUG00000011842	-	87	90.323	ENSPPRG00000017935	-	100	90.323	Panthera_pardus
ENSVVUG00000011842	-	100	92.958	ENSPTIG00000019099	-	100	92.958	Panthera_tigris_altaica
ENSVVUG00000011842	-	85	85.950	ENSPTIG00000009717	-	98	85.950	Panthera_tigris_altaica
ENSVVUG00000011842	-	100	92.254	ENSPTIG00000009394	-	100	92.254	Panthera_tigris_altaica
ENSVVUG00000011842	-	100	84.507	ENSPTRG00000022791	MRPL42	100	84.507	Pan_troglodytes
ENSVVUG00000011842	-	100	75.510	ENSPANG00000030179	MRPL42	89	87.129	Papio_anubis
ENSVVUG00000011842	-	100	63.514	ENSPSIG00000010745	MRPL42	100	63.514	Pelodiscus_sinensis
ENSVVUG00000011842	-	98	79.856	ENSPEMG00000020562	-	99	79.856	Peromyscus_maniculatus_bairdii
ENSVVUG00000011842	-	100	68.919	ENSPCIG00000001472	-	77	68.919	Phascolarctos_cinereus
ENSVVUG00000011842	-	100	85.211	ENSPPYG00000004833	MRPL42	100	85.211	Pongo_abelii
ENSVVUG00000011842	-	83	83.051	ENSPCAG00000003791	MRPL42	100	83.051	Procavia_capensis
ENSVVUG00000011842	-	100	73.944	ENSPCOG00000025008	-	100	73.944	Propithecus_coquereli
ENSVVUG00000011842	-	96	82.353	ENSPCOG00000014986	-	98	82.353	Propithecus_coquereli
ENSVVUG00000011842	-	100	66.901	ENSPCOG00000018896	-	100	66.901	Propithecus_coquereli
ENSVVUG00000011842	-	58	70.732	ENSPVAG00000013736	-	100	58.475	Pteropus_vampyrus
ENSVVUG00000011842	-	98	78.417	ENSRNOG00000042740	Mrpl42	99	78.417	Rattus_norvegicus
ENSVVUG00000011842	-	98	72.857	ENSRNOG00000021867	AABR07009508.1	98	72.857	Rattus_norvegicus
ENSVVUG00000011842	-	67	74.737	ENSRNOG00000031132	LOC367117	51	67.647	Rattus_norvegicus
ENSVVUG00000011842	-	90	65.625	ENSRBIG00000044361	-	85	63.235	Rhinopithecus_bieti
ENSVVUG00000011842	-	100	85.211	ENSRBIG00000011046	-	100	85.211	Rhinopithecus_bieti
ENSVVUG00000011842	-	100	85.915	ENSRROG00000033949	MRPL42	100	85.915	Rhinopithecus_roxellana
ENSVVUG00000011842	-	100	80.282	ENSSBOG00000009656	-	100	80.282	Saimiri_boliviensis_boliviensis
ENSVVUG00000011842	-	83	61.864	ENSSBOG00000025086	-	100	61.864	Saimiri_boliviensis_boliviensis
ENSVVUG00000011842	-	66	78.723	ENSSBOG00000027483	-	89	74.510	Saimiri_boliviensis_boliviensis
ENSVVUG00000011842	-	84	61.667	ENSSFOG00015006975	mrpl42	82	61.667	Scleropages_formosus
ENSVVUG00000011842	-	94	62.500	ENSSPUG00000015009	-	97	62.500	Sphenodon_punctatus
ENSVVUG00000011842	-	64	65.934	ENSSPAG00000013637	mrpl42	71	65.934	Stegastes_partitus
ENSVVUG00000011842	-	100	88.732	ENSSSCG00000030478	-	100	88.732	Sus_scrofa
ENSVVUG00000011842	-	70	56.566	ENSSSCG00000034693	-	84	56.566	Sus_scrofa
ENSVVUG00000011842	-	99	64.539	ENSSSCG00000036897	-	99	64.539	Sus_scrofa
ENSVVUG00000011842	-	82	59.016	ENSSSCG00000035613	-	100	59.016	Sus_scrofa
ENSVVUG00000011842	-	83	72.881	ENSTGUG00000008272	MRPL42	100	72.881	Taeniopygia_guttata
ENSVVUG00000011842	-	65	57.609	ENSTNIG00000018478	mrpl42	70	57.609	Tetraodon_nigroviridis
ENSVVUG00000011842	-	87	88.618	ENSTTRG00000003312	MRPL42	92	88.618	Tursiops_truncatus
ENSVVUG00000011842	-	100	95.775	ENSUAMG00000025405	-	100	95.775	Ursus_americanus
ENSVVUG00000011842	-	63	74.444	ENSUAMG00000019831	-	88	74.444	Ursus_americanus
ENSVVUG00000011842	-	86	77.236	ENSUMAG00000014643	-	77	77.236	Ursus_maritimus
ENSVVUG00000011842	-	100	95.775	ENSUMAG00000003107	-	100	95.775	Ursus_maritimus
ENSVVUG00000011842	-	83	92.373	ENSVPAG00000007658	MRPL42	100	92.373	Vicugna_pacos
ENSVVUG00000011842	-	87	50.806	ENSXMAG00000004057	mrpl42	85	50.806	Xiphophorus_maculatus