EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000012178 (Gene tree)
Gene ID: -
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 85253 bases
Position: chrNBDQ01000041.1:2061393-2146645
Accession: 112922703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000016536	XRN_N	PF03159.18	1.6e-102	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000021762	XRN2-201	2979	XM_026002327	ENSVVUP00000016536	950 (aa)	XP_025858112	UPI000DF69338

Gene Model

Click here to download ENSVVUG00000012178's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000012178's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000012178	XRN2	71	39.327	ENSVVUG00000024461	XRN1	100	36.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000012178	XRN2	100	98.105	ENSG00000088930	XRN2	100	98.105	Homo_sapiens
ENSVVUG00000012178	XRN2	97	71.702	ENSAPOG00000009818	xrn2	100	70.438	Acanthochromis_polyacanthus
ENSVVUG00000012178	XRN2	100	99.368	ENSAMEG00000012581	XRN2	100	99.368	Ailuropoda_melanoleuca
ENSVVUG00000012178	XRN2	90	70.273	ENSACIG00000015047	xrn2	95	74.664	Amphilophus_citrinellus
ENSVVUG00000012178	XRN2	97	72.222	ENSAOCG00000023632	xrn2	100	70.964	Amphiprion_ocellaris
ENSVVUG00000012178	XRN2	97	72.051	ENSAPEG00000014871	xrn2	100	70.774	Amphiprion_percula
ENSVVUG00000012178	XRN2	95	71.614	ENSATEG00000001273	xrn2	97	70.930	Anabas_testudineus
ENSVVUG00000012178	XRN2	97	83.638	ENSAPLG00000013869	XRN2	99	84.069	Anas_platyrhynchos
ENSVVUG00000012178	XRN2	100	80.849	ENSACAG00000005565	XRN2	100	80.849	Anolis_carolinensis
ENSVVUG00000012178	XRN2	100	97.895	ENSANAG00000020126	XRN2	100	97.895	Aotus_nancymaae
ENSVVUG00000012178	XRN2	90	73.642	ENSACLG00000010522	xrn2	96	76.667	Astatotilapia_calliptera
ENSVVUG00000012178	XRN2	100	71.254	ENSAMXG00000018301	xrn2	100	71.254	Astyanax_mexicanus
ENSVVUG00000012178	XRN2	100	96.530	ENSBTAG00000011304	XRN2	100	96.530	Bos_taurus
ENSVVUG00000012178	XRN2	87	56.047	WBGene00006964	xrn-2	89	55.317	Caenorhabditis_elegans
ENSVVUG00000012178	XRN2	100	97.895	ENSCJAG00000005611	XRN2	100	97.895	Callithrix_jacchus
ENSVVUG00000012178	XRN2	100	99.684	ENSCAFG00000005185	XRN2	100	99.684	Canis_familiaris
ENSVVUG00000012178	XRN2	100	99.684	ENSCAFG00020027479	XRN2	100	99.684	Canis_lupus_dingo
ENSVVUG00000012178	XRN2	100	96.635	ENSCHIG00000006921	XRN2	100	96.635	Capra_hircus
ENSVVUG00000012178	XRN2	100	97.579	ENSTSYG00000008315	XRN2	100	97.579	Carlito_syrichta
ENSVVUG00000012178	XRN2	97	82.093	ENSCAPG00000010773	XRN2	99	81.985	Cavia_aperea
ENSVVUG00000012178	XRN2	100	97.368	ENSCPOG00000009407	XRN2	100	97.368	Cavia_porcellus
ENSVVUG00000012178	XRN2	100	98.421	ENSCATG00000040350	XRN2	100	98.421	Cercocebus_atys
ENSVVUG00000012178	XRN2	100	97.895	ENSCLAG00000013419	XRN2	100	97.895	Chinchilla_lanigera
ENSVVUG00000012178	XRN2	100	98.421	ENSCSAG00000011094	XRN2	100	98.421	Chlorocebus_sabaeus
ENSVVUG00000012178	XRN2	68	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSVVUG00000012178	XRN2	100	84.792	ENSCPBG00000023533	XRN2	100	85.417	Chrysemys_picta_bellii
ENSVVUG00000012178	XRN2	86	60.501	ENSCING00000022336	-	100	60.859	Ciona_intestinalis
ENSVVUG00000012178	XRN2	87	59.308	ENSCSAVG00000011217	-	100	61.787	Ciona_savignyi
ENSVVUG00000012178	XRN2	100	98.421	ENSCANG00000040240	XRN2	100	98.421	Colobus_angolensis_palliatus
ENSVVUG00000012178	XRN2	98	96.233	ENSCGRG00001010676	Xrn2	99	96.233	Cricetulus_griseus_chok1gshd
ENSVVUG00000012178	XRN2	97	95.469	ENSCGRG00000006378	Xrn2	99	95.469	Cricetulus_griseus_crigri
ENSVVUG00000012178	XRN2	54	72.353	ENSCSEG00000005628	xrn2	100	72.353	Cynoglossus_semilaevis
ENSVVUG00000012178	XRN2	89	71.379	ENSCVAG00000018999	xrn2	98	76.952	Cyprinodon_variegatus
ENSVVUG00000012178	XRN2	100	70.021	ENSDARG00000101900	xrn2	96	78.203	Danio_rerio
ENSVVUG00000012178	XRN2	100	97.263	ENSDNOG00000001895	XRN2	100	97.263	Dasypus_novemcinctus
ENSVVUG00000012178	XRN2	100	95.263	ENSDORG00000005434	Xrn2	100	95.263	Dipodomys_ordii
ENSVVUG00000012178	XRN2	87	56.469	FBgn0031868	Rat1	90	55.582	Drosophila_melanogaster
ENSVVUG00000012178	XRN2	100	83.789	ENSETEG00000001740	XRN2	100	83.789	Echinops_telfairi
ENSVVUG00000012178	XRN2	84	71.515	ENSEBUG00000016136	xrn2	100	71.515	Eptatretus_burgeri
ENSVVUG00000012178	XRN2	100	98.211	ENSEASG00005002484	XRN2	100	98.211	Equus_asinus_asinus
ENSVVUG00000012178	XRN2	99	98.099	ENSECAG00000018988	XRN2	100	96.281	Equus_caballus
ENSVVUG00000012178	XRN2	80	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSVVUG00000012178	XRN2	100	70.492	ENSELUG00000000552	xrn2	100	70.902	Esox_lucius
ENSVVUG00000012178	XRN2	100	99.263	ENSFCAG00000007970	XRN2	100	99.263	Felis_catus
ENSVVUG00000012178	XRN2	100	83.019	ENSFALG00000004508	XRN2	100	83.438	Ficedula_albicollis
ENSVVUG00000012178	XRN2	100	97.474	ENSFDAG00000016311	XRN2	100	97.474	Fukomys_damarensis
ENSVVUG00000012178	XRN2	54	69.847	ENSFHEG00000013039	xrn2	98	69.847	Fundulus_heteroclitus
ENSVVUG00000012178	XRN2	86	72.904	ENSGMOG00000013436	xrn2	100	72.904	Gadus_morhua
ENSVVUG00000012178	XRN2	100	83.246	ENSGALG00000008372	XRN2	100	83.246	Gallus_gallus
ENSVVUG00000012178	XRN2	89	73.605	ENSGAFG00000014284	xrn2	98	73.605	Gambusia_affinis
ENSVVUG00000012178	XRN2	87	74.760	ENSGACG00000011870	xrn2	100	74.760	Gasterosteus_aculeatus
ENSVVUG00000012178	XRN2	100	84.792	ENSGAGG00000004884	XRN2	100	85.417	Gopherus_agassizii
ENSVVUG00000012178	XRN2	100	98.316	ENSGGOG00000013738	XRN2	100	98.316	Gorilla_gorilla
ENSVVUG00000012178	XRN2	54	74.664	ENSHBUG00000005077	xrn2	96	76.667	Haplochromis_burtoni
ENSVVUG00000012178	XRN2	100	96.526	ENSHGLG00000014831	XRN2	100	96.526	Heterocephalus_glaber_female
ENSVVUG00000012178	XRN2	100	96.526	ENSHGLG00100013130	XRN2	100	96.526	Heterocephalus_glaber_male
ENSVVUG00000012178	XRN2	99	68.219	ENSHCOG00000011994	xrn2	99	69.130	Hippocampus_comes
ENSVVUG00000012178	XRN2	100	69.592	ENSIPUG00000006639	xrn2	100	69.592	Ictalurus_punctatus
ENSVVUG00000012178	XRN2	100	98.526	ENSSTOG00000000589	XRN2	100	98.526	Ictidomys_tridecemlineatus
ENSVVUG00000012178	XRN2	100	96.842	ENSJJAG00000022128	Xrn2	100	96.842	Jaculus_jaculus
ENSVVUG00000012178	XRN2	54	79.688	ENSLBEG00000010041	xrn2	100	79.688	Labrus_bergylta
ENSVVUG00000012178	XRN2	94	77.308	ENSLACG00000008307	XRN2	99	79.877	Latimeria_chalumnae
ENSVVUG00000012178	XRN2	99	72.803	ENSLOCG00000016874	xrn2	100	72.803	Lepisosteus_oculatus
ENSVVUG00000012178	XRN2	100	96.947	ENSLAFG00000014624	XRN2	100	96.947	Loxodonta_africana
ENSVVUG00000012178	XRN2	100	98.421	ENSMFAG00000038122	XRN2	100	98.421	Macaca_fascicularis
ENSVVUG00000012178	XRN2	100	98.421	ENSMMUG00000011405	XRN2	100	98.421	Macaca_mulatta
ENSVVUG00000012178	XRN2	100	98.526	ENSMNEG00000040626	XRN2	100	98.526	Macaca_nemestrina
ENSVVUG00000012178	XRN2	100	98.316	ENSMLEG00000041897	XRN2	100	98.316	Mandrillus_leucophaeus
ENSVVUG00000012178	XRN2	95	72.797	ENSMAMG00000008633	xrn2	98	71.279	Mastacembelus_armatus
ENSVVUG00000012178	XRN2	90	75.607	ENSMZEG00005022362	xrn2	97	75.607	Maylandia_zebra
ENSVVUG00000012178	XRN2	99	81.667	ENSMGAG00000003196	XRN2	99	81.667	Meleagris_gallopavo
ENSVVUG00000012178	XRN2	100	96.526	ENSMAUG00000021842	Xrn2	100	96.526	Mesocricetus_auratus
ENSVVUG00000012178	XRN2	100	97.263	ENSMICG00000008126	XRN2	100	97.263	Microcebus_murinus
ENSVVUG00000012178	XRN2	100	96.000	ENSMOCG00000012588	Xrn2	100	96.000	Microtus_ochrogaster
ENSVVUG00000012178	XRN2	89	73.883	ENSMMOG00000017576	xrn2	96	74.432	Mola_mola
ENSVVUG00000012178	XRN2	100	90.947	ENSMODG00000006163	XRN2	100	90.947	Monodelphis_domestica
ENSVVUG00000012178	XRN2	91	72.360	ENSMALG00000011355	xrn2	99	72.360	Monopterus_albus
ENSVVUG00000012178	XRN2	100	95.373	MGP_CAROLIEiJ_G0024400	Xrn2	100	95.373	Mus_caroli
ENSVVUG00000012178	XRN2	100	95.584	ENSMUSG00000027433	Xrn2	100	95.584	Mus_musculus
ENSVVUG00000012178	XRN2	100	95.373	MGP_PahariEiJ_G0025843	Xrn2	100	95.373	Mus_pahari
ENSVVUG00000012178	XRN2	100	95.584	MGP_SPRETEiJ_G0025318	Xrn2	100	95.584	Mus_spretus
ENSVVUG00000012178	XRN2	100	97.828	ENSMPUG00000001198	XRN2	93	97.828	Mustela_putorius_furo
ENSVVUG00000012178	XRN2	100	97.579	ENSMLUG00000001536	XRN2	100	97.579	Myotis_lucifugus
ENSVVUG00000012178	XRN2	100	96.737	ENSNGAG00000018138	Xrn2	100	96.737	Nannospalax_galili
ENSVVUG00000012178	XRN2	90	75.810	ENSNBRG00000008062	xrn2	97	75.810	Neolamprologus_brichardi
ENSVVUG00000012178	XRN2	100	98.316	ENSNLEG00000009991	XRN2	100	98.316	Nomascus_leucogenys
ENSVVUG00000012178	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSVVUG00000012178	XRN2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSVVUG00000012178	XRN2	98	88.457	ENSODEG00000000860	-	99	88.889	Octodon_degus
ENSVVUG00000012178	XRN2	100	97.579	ENSODEG00000010745	-	100	97.579	Octodon_degus
ENSVVUG00000012178	XRN2	100	71.649	ENSONIG00000018720	xrn2	100	71.856	Oreochromis_niloticus
ENSVVUG00000012178	XRN2	100	91.282	ENSOANG00000015673	XRN2	100	91.282	Ornithorhynchus_anatinus
ENSVVUG00000012178	XRN2	100	98.316	ENSOCUG00000013468	XRN2	100	98.316	Oryctolagus_cuniculus
ENSVVUG00000012178	XRN2	98	70.405	ENSORLG00000017213	xrn2	97	75.058	Oryzias_latipes
ENSVVUG00000012178	XRN2	98	70.405	ENSORLG00020001824	xrn2	100	70.061	Oryzias_latipes_hni
ENSVVUG00000012178	XRN2	98	70.197	ENSORLG00015019747	xrn2	100	69.857	Oryzias_latipes_hsok
ENSVVUG00000012178	XRN2	90	74.220	ENSOMEG00000019820	xrn2	100	69.340	Oryzias_melastigma
ENSVVUG00000012178	XRN2	100	97.056	ENSOGAG00000001068	XRN2	100	97.056	Otolemur_garnettii
ENSVVUG00000012178	XRN2	97	96.652	ENSOARG00000004443	XRN2	100	96.652	Ovis_aries
ENSVVUG00000012178	XRN2	100	98.316	ENSPPAG00000033549	XRN2	100	98.316	Pan_paniscus
ENSVVUG00000012178	XRN2	100	99.263	ENSPPRG00000008732	XRN2	100	99.263	Panthera_pardus
ENSVVUG00000012178	XRN2	97	99.243	ENSPTIG00000015683	XRN2	97	99.243	Panthera_tigris_altaica
ENSVVUG00000012178	XRN2	100	98.316	ENSPTRG00000013308	XRN2	100	98.316	Pan_troglodytes
ENSVVUG00000012178	XRN2	100	98.421	ENSPANG00000018088	XRN2	100	98.421	Papio_anubis
ENSVVUG00000012178	XRN2	100	70.829	ENSPKIG00000016889	xrn2	100	70.829	Paramormyrops_kingsleyae
ENSVVUG00000012178	XRN2	81	87.500	ENSPSIG00000014666	XRN2	100	87.500	Pelodiscus_sinensis
ENSVVUG00000012178	XRN2	100	95.789	ENSPEMG00000000111	Xrn2	100	95.789	Peromyscus_maniculatus_bairdii
ENSVVUG00000012178	XRN2	100	69.990	ENSPFOG00000004182	xrn2	99	70.393	Poecilia_formosa
ENSVVUG00000012178	XRN2	89	74.302	ENSPLAG00000007351	xrn2	96	74.302	Poecilia_latipinna
ENSVVUG00000012178	XRN2	94	68.335	ENSPMEG00000011798	xrn2	99	69.206	Poecilia_mexicana
ENSVVUG00000012178	XRN2	89	74.186	ENSPREG00000012452	xrn2	99	72.615	Poecilia_reticulata
ENSVVUG00000012178	XRN2	100	97.895	ENSPPYG00000010755	XRN2	100	97.895	Pongo_abelii
ENSVVUG00000012178	XRN2	100	91.176	ENSPCAG00000011191	XRN2	100	91.176	Procavia_capensis
ENSVVUG00000012178	XRN2	100	90.737	ENSPCOG00000016468	XRN2	100	90.737	Propithecus_coquereli
ENSVVUG00000012178	XRN2	93	95.745	ENSPVAG00000004596	XRN2	93	95.745	Pteropus_vampyrus
ENSVVUG00000012178	XRN2	90	73.642	ENSPNYG00000001765	xrn2	97	73.642	Pundamilia_nyererei
ENSVVUG00000012178	XRN2	100	71.327	ENSPNAG00000010956	xrn2	99	71.327	Pygocentrus_nattereri
ENSVVUG00000012178	XRN2	100	96.320	ENSRNOG00000011785	Xrn2	100	96.320	Rattus_norvegicus
ENSVVUG00000012178	XRN2	86	98.411	ENSRBIG00000036193	XRN2	100	98.411	Rhinopithecus_bieti
ENSVVUG00000012178	XRN2	100	98.421	ENSRROG00000044400	XRN2	90	98.421	Rhinopithecus_roxellana
ENSVVUG00000012178	XRN2	69	52.283	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSVVUG00000012178	XRN2	100	98.105	ENSSBOG00000021014	XRN2	100	98.105	Saimiri_boliviensis_boliviensis
ENSVVUG00000012178	XRN2	100	72.033	ENSSFOG00015001091	xrn2	100	72.033	Scleropages_formosus
ENSVVUG00000012178	XRN2	92	73.363	ENSSMAG00000007834	xrn2	100	68.997	Scophthalmus_maximus
ENSVVUG00000012178	XRN2	91	72.059	ENSSDUG00000012802	xrn2	99	72.398	Seriola_dumerili
ENSVVUG00000012178	XRN2	93	73.785	ENSSLDG00000021273	xrn2	100	73.785	Seriola_lalandi_dorsalis
ENSVVUG00000012178	XRN2	76	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSVVUG00000012178	XRN2	98	80.064	ENSSPUG00000005485	XRN2	96	80.128	Sphenodon_punctatus
ENSVVUG00000012178	XRN2	100	70.624	ENSSPAG00000016027	xrn2	99	70.624	Stegastes_partitus
ENSVVUG00000012178	XRN2	100	96.421	ENSSSCG00000007109	XRN2	100	96.421	Sus_scrofa
ENSVVUG00000012178	XRN2	100	81.837	ENSTGUG00000007535	XRN2	100	82.255	Taeniopygia_guttata
ENSVVUG00000012178	XRN2	100	67.980	ENSTRUG00000015489	xrn2	100	68.352	Takifugu_rubripes
ENSVVUG00000012178	XRN2	100	71.236	ENSTNIG00000010712	xrn2	100	71.236	Tetraodon_nigroviridis
ENSVVUG00000012178	XRN2	100	97.263	ENSTBEG00000004119	XRN2	100	97.263	Tupaia_belangeri
ENSVVUG00000012178	XRN2	93	98.378	ENSTTRG00000009087	XRN2	93	98.378	Tursiops_truncatus
ENSVVUG00000012178	XRN2	100	99.474	ENSUAMG00000024634	XRN2	100	99.474	Ursus_americanus
ENSVVUG00000012178	XRN2	97	99.243	ENSUMAG00000004012	XRN2	95	99.243	Ursus_maritimus
ENSVVUG00000012178	XRN2	89	90.059	ENSVPAG00000010694	XRN2	91	90.059	Vicugna_pacos
ENSVVUG00000012178	XRN2	100	74.453	ENSXETG00000023501	xrn2	100	75.078	Xenopus_tropicalis
ENSVVUG00000012178	XRN2	100	68.345	ENSXMAG00000000242	xrn2	92	79.075	Xiphophorus_maculatus