EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000012357 (Gene tree)
Gene ID: -
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 2494 bases
Position: chrNBDQ01000201.1:2068221-2070714
Accession: 112909107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000016781	PseudoU_synth_2	PF00849.22	4.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000022090	RPUSD1-201	1680	XM_025984921	ENSVVUP00000016781	302 (aa)	XP_025840706	UPI000DF6C994

Gene Model

Click here to download ENSVVUG00000012357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000012357's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000012357	RPUSD1	99	80.064	ENSG00000007376	RPUSD1	100	85.714	Homo_sapiens
ENSVVUG00000012357	RPUSD1	98	59.272	ENSAPOG00000022221	rpusd1	98	59.272	Acanthochromis_polyacanthus
ENSVVUG00000012357	RPUSD1	100	93.377	ENSAMEG00000007461	RPUSD1	100	93.377	Ailuropoda_melanoleuca
ENSVVUG00000012357	RPUSD1	98	57.516	ENSACIG00000015863	rpusd1	98	58.824	Amphilophus_citrinellus
ENSVVUG00000012357	RPUSD1	98	57.705	ENSAOCG00000021975	rpusd1	95	57.377	Amphiprion_ocellaris
ENSVVUG00000012357	RPUSD1	98	58.033	ENSAPEG00000001316	rpusd1	95	57.705	Amphiprion_percula
ENSVVUG00000012357	RPUSD1	79	67.364	ENSATEG00000002984	rpusd1	98	58.033	Anabas_testudineus
ENSVVUG00000012357	RPUSD1	78	61.382	ENSAPLG00000012316	RPUSD1	99	61.382	Anas_platyrhynchos
ENSVVUG00000012357	RPUSD1	99	68.421	ENSACAG00000008953	RPUSD1	100	68.421	Anolis_carolinensis
ENSVVUG00000012357	RPUSD1	99	79.683	ENSANAG00000024709	RPUSD1	99	81.029	Aotus_nancymaae
ENSVVUG00000012357	RPUSD1	98	57.097	ENSACLG00000013692	rpusd1	98	57.980	Astatotilapia_calliptera
ENSVVUG00000012357	RPUSD1	99	60.066	ENSAMXG00000019802	rpusd1	100	60.066	Astyanax_mexicanus
ENSVVUG00000012357	RPUSD1	100	85.065	ENSBTAG00000000179	RPUSD1	100	85.065	Bos_taurus
ENSVVUG00000012357	RPUSD1	99	80.386	ENSCJAG00000012253	RPUSD1	99	80.386	Callithrix_jacchus
ENSVVUG00000012357	RPUSD1	100	97.020	ENSCAFG00000019614	RPUSD1	100	97.020	Canis_familiaris
ENSVVUG00000012357	RPUSD1	100	97.020	ENSCAFG00020008891	RPUSD1	100	97.020	Canis_lupus_dingo
ENSVVUG00000012357	RPUSD1	100	85.065	ENSCHIG00000012872	RPUSD1	100	85.065	Capra_hircus
ENSVVUG00000012357	RPUSD1	99	81.395	ENSTSYG00000036934	RPUSD1	99	81.395	Carlito_syrichta
ENSVVUG00000012357	RPUSD1	100	82.680	ENSCAPG00000014219	RPUSD1	100	82.680	Cavia_aperea
ENSVVUG00000012357	RPUSD1	100	82.680	ENSCPOG00000034604	RPUSD1	100	82.680	Cavia_porcellus
ENSVVUG00000012357	RPUSD1	99	81.672	ENSCCAG00000034385	RPUSD1	99	81.672	Cebus_capucinus
ENSVVUG00000012357	RPUSD1	99	81.029	ENSCATG00000042983	RPUSD1	99	81.029	Cercocebus_atys
ENSVVUG00000012357	RPUSD1	100	80.719	ENSCLAG00000013966	RPUSD1	100	80.782	Chinchilla_lanigera
ENSVVUG00000012357	RPUSD1	99	80.707	ENSCSAG00000012121	RPUSD1	99	80.707	Chlorocebus_sabaeus
ENSVVUG00000012357	RPUSD1	99	66.447	ENSCPBG00000021101	RPUSD1	99	66.447	Chrysemys_picta_bellii
ENSVVUG00000012357	RPUSD1	88	85.019	ENSCANG00000028576	RPUSD1	95	85.019	Colobus_angolensis_palliatus
ENSVVUG00000012357	RPUSD1	100	81.188	ENSCGRG00001014253	Rpusd1	100	81.188	Cricetulus_griseus_chok1gshd
ENSVVUG00000012357	RPUSD1	100	81.188	ENSCGRG00000017995	Rpusd1	100	81.188	Cricetulus_griseus_crigri
ENSVVUG00000012357	RPUSD1	99	57.285	ENSCSEG00000018512	rpusd1	100	57.285	Cynoglossus_semilaevis
ENSVVUG00000012357	RPUSD1	98	59.000	ENSCVAG00000022746	rpusd1	98	59.000	Cyprinodon_variegatus
ENSVVUG00000012357	RPUSD1	99	63.000	ENSDARG00000060192	rpusd1	100	63.000	Danio_rerio
ENSVVUG00000012357	RPUSD1	100	81.494	ENSDNOG00000003721	RPUSD1	100	81.494	Dasypus_novemcinctus
ENSVVUG00000012357	RPUSD1	100	83.828	ENSDORG00000026656	Rpusd1	100	85.149	Dipodomys_ordii
ENSVVUG00000012357	RPUSD1	97	45.631	ENSEBUG00000008767	rpusd1	93	45.631	Eptatretus_burgeri
ENSVVUG00000012357	RPUSD1	100	82.911	ENSEASG00005018421	RPUSD1	76	83.861	Equus_asinus_asinus
ENSVVUG00000012357	RPUSD1	84	60.236	ENSELUG00000014307	rpusd1	88	54.754	Esox_lucius
ENSVVUG00000012357	RPUSD1	100	90.728	ENSFCAG00000010359	RPUSD1	100	90.728	Felis_catus
ENSVVUG00000012357	RPUSD1	99	67.219	ENSFALG00000003211	RPUSD1	100	67.219	Ficedula_albicollis
ENSVVUG00000012357	RPUSD1	100	82.736	ENSFDAG00000013398	RPUSD1	100	82.736	Fukomys_damarensis
ENSVVUG00000012357	RPUSD1	98	57.756	ENSFHEG00000004736	rpusd1	98	56.766	Fundulus_heteroclitus
ENSVVUG00000012357	RPUSD1	84	62.055	ENSGMOG00000010756	rpusd1	99	55.049	Gadus_morhua
ENSVVUG00000012357	RPUSD1	99	67.869	ENSGALG00000005315	RPUSD1	100	67.869	Gallus_gallus
ENSVVUG00000012357	RPUSD1	98	59.000	ENSGAFG00000009886	rpusd1	98	59.000	Gambusia_affinis
ENSVVUG00000012357	RPUSD1	82	64.257	ENSGACG00000014276	rpusd1	97	56.908	Gasterosteus_aculeatus
ENSVVUG00000012357	RPUSD1	99	66.447	ENSGAGG00000004181	RPUSD1	99	66.447	Gopherus_agassizii
ENSVVUG00000012357	RPUSD1	99	79.743	ENSGGOG00000013997	RPUSD1	99	79.743	Gorilla_gorilla
ENSVVUG00000012357	RPUSD1	98	57.097	ENSHBUG00000023728	rpusd1	98	57.980	Haplochromis_burtoni
ENSVVUG00000012357	RPUSD1	100	82.353	ENSHGLG00000002595	RPUSD1	100	83.007	Heterocephalus_glaber_female
ENSVVUG00000012357	RPUSD1	100	82.353	ENSHGLG00100014303	RPUSD1	100	83.007	Heterocephalus_glaber_male
ENSVVUG00000012357	RPUSD1	98	56.902	ENSHCOG00000002390	rpusd1	99	56.902	Hippocampus_comes
ENSVVUG00000012357	RPUSD1	99	60.726	ENSIPUG00000001570	rpusd1	99	62.046	Ictalurus_punctatus
ENSVVUG00000012357	RPUSD1	100	83.007	ENSSTOG00000004276	RPUSD1	100	83.007	Ictidomys_tridecemlineatus
ENSVVUG00000012357	RPUSD1	100	83.333	ENSJJAG00000015696	Rpusd1	100	83.607	Jaculus_jaculus
ENSVVUG00000012357	RPUSD1	98	57.333	ENSKMAG00000017287	rpusd1	98	57.000	Kryptolebias_marmoratus
ENSVVUG00000012357	RPUSD1	98	56.066	ENSLBEG00000022502	rpusd1	98	56.393	Labrus_bergylta
ENSVVUG00000012357	RPUSD1	98	56.066	ENSLBEG00000013354	RPUSD1	98	56.393	Labrus_bergylta
ENSVVUG00000012357	RPUSD1	99	61.564	ENSLACG00000008869	RPUSD1	99	61.564	Latimeria_chalumnae
ENSVVUG00000012357	RPUSD1	72	74.074	ENSLOCG00000005682	rpusd1	99	74.074	Lepisosteus_oculatus
ENSVVUG00000012357	RPUSD1	99	84.385	ENSLAFG00000002115	RPUSD1	99	84.385	Loxodonta_africana
ENSVVUG00000012357	RPUSD1	99	81.029	ENSMFAG00000003961	RPUSD1	99	81.029	Macaca_fascicularis
ENSVVUG00000012357	RPUSD1	99	81.029	ENSMMUG00000000842	RPUSD1	99	81.029	Macaca_mulatta
ENSVVUG00000012357	RPUSD1	99	81.029	ENSMNEG00000042712	RPUSD1	99	81.029	Macaca_nemestrina
ENSVVUG00000012357	RPUSD1	99	81.029	ENSMLEG00000030591	RPUSD1	99	81.029	Mandrillus_leucophaeus
ENSVVUG00000012357	RPUSD1	84	65.217	ENSMAMG00000004735	rpusd1	98	58.497	Mastacembelus_armatus
ENSVVUG00000012357	RPUSD1	98	57.097	ENSMZEG00005003214	rpusd1	98	57.980	Maylandia_zebra
ENSVVUG00000012357	RPUSD1	97	67.450	ENSMGAG00000005447	RPUSD1	99	67.450	Meleagris_gallopavo
ENSVVUG00000012357	RPUSD1	87	77.820	ENSMAUG00000019998	Rpusd1	100	77.820	Mesocricetus_auratus
ENSVVUG00000012357	RPUSD1	100	82.736	ENSMICG00000017561	RPUSD1	100	83.062	Microcebus_murinus
ENSVVUG00000012357	RPUSD1	99	83.607	ENSMOCG00000014082	Rpusd1	99	84.262	Microtus_ochrogaster
ENSVVUG00000012357	RPUSD1	98	57.432	ENSMMOG00000012569	rpusd1	99	57.432	Mola_mola
ENSVVUG00000012357	RPUSD1	100	70.227	ENSMODG00000016882	RPUSD1	100	70.550	Monodelphis_domestica
ENSVVUG00000012357	RPUSD1	98	56.863	ENSMALG00000017818	rpusd1	98	57.516	Monopterus_albus
ENSVVUG00000012357	RPUSD1	100	84.314	MGP_CAROLIEiJ_G0021244	Rpusd1	100	84.365	Mus_caroli
ENSVVUG00000012357	RPUSD1	100	84.314	ENSMUSG00000041199	Rpusd1	100	84.365	Mus_musculus
ENSVVUG00000012357	RPUSD1	99	83.607	MGP_PahariEiJ_G0023562	Rpusd1	99	83.607	Mus_pahari
ENSVVUG00000012357	RPUSD1	100	84.314	MGP_SPRETEiJ_G0022155	Rpusd1	100	84.365	Mus_spretus
ENSVVUG00000012357	RPUSD1	100	91.391	ENSMPUG00000015897	RPUSD1	100	91.391	Mustela_putorius_furo
ENSVVUG00000012357	RPUSD1	100	82.692	ENSMLUG00000001089	RPUSD1	100	83.280	Myotis_lucifugus
ENSVVUG00000012357	RPUSD1	100	81.699	ENSNGAG00000003595	Rpusd1	100	82.353	Nannospalax_galili
ENSVVUG00000012357	RPUSD1	98	59.322	ENSNBRG00000006457	rpusd1	98	59.322	Neolamprologus_brichardi
ENSVVUG00000012357	RPUSD1	54	77.011	ENSNLEG00000008424	-	99	77.011	Nomascus_leucogenys
ENSVVUG00000012357	RPUSD1	100	70.627	ENSMEUG00000016049	RPUSD1	100	70.627	Notamacropus_eugenii
ENSVVUG00000012357	RPUSD1	100	77.152	ENSOPRG00000008340	RPUSD1	100	77.152	Ochotona_princeps
ENSVVUG00000012357	RPUSD1	100	80.392	ENSODEG00000016945	RPUSD1	100	80.392	Octodon_degus
ENSVVUG00000012357	RPUSD1	98	56.452	ENSONIG00000015672	rpusd1	99	57.329	Oreochromis_niloticus
ENSVVUG00000012357	RPUSD1	99	58.940	ENSORLG00000013009	rpusd1	99	58.940	Oryzias_latipes
ENSVVUG00000012357	RPUSD1	99	58.609	ENSORLG00020010382	rpusd1	99	58.609	Oryzias_latipes_hni
ENSVVUG00000012357	RPUSD1	99	57.947	ENSORLG00015021354	rpusd1	99	57.947	Oryzias_latipes_hsok
ENSVVUG00000012357	RPUSD1	98	58.249	ENSOMEG00000021426	rpusd1	98	58.249	Oryzias_melastigma
ENSVVUG00000012357	RPUSD1	100	81.731	ENSOGAG00000003795	RPUSD1	100	82.051	Otolemur_garnettii
ENSVVUG00000012357	RPUSD1	100	84.740	ENSOARG00000014254	RPUSD1	100	84.740	Ovis_aries
ENSVVUG00000012357	RPUSD1	99	79.743	ENSPPAG00000034797	RPUSD1	99	79.743	Pan_paniscus
ENSVVUG00000012357	RPUSD1	100	90.066	ENSPPRG00000012389	RPUSD1	100	90.066	Panthera_pardus
ENSVVUG00000012357	RPUSD1	100	90.066	ENSPTIG00000008545	RPUSD1	92	90.066	Panthera_tigris_altaica
ENSVVUG00000012357	RPUSD1	99	79.743	ENSPTRG00000007565	RPUSD1	99	79.743	Pan_troglodytes
ENSVVUG00000012357	RPUSD1	99	80.386	ENSPANG00000024401	RPUSD1	99	80.386	Papio_anubis
ENSVVUG00000012357	RPUSD1	99	61.513	ENSPKIG00000018890	rpusd1	91	61.513	Paramormyrops_kingsleyae
ENSVVUG00000012357	RPUSD1	99	68.301	ENSPSIG00000013945	RPUSD1	100	68.301	Pelodiscus_sinensis
ENSVVUG00000012357	RPUSD1	97	58.163	ENSPMGG00000014950	rpusd1	97	58.163	Periophthalmus_magnuspinnatus
ENSVVUG00000012357	RPUSD1	100	81.699	ENSPEMG00000000497	Rpusd1	100	81.699	Peromyscus_maniculatus_bairdii
ENSVVUG00000012357	RPUSD1	98	52.303	ENSPMAG00000001563	rpusd1	99	52.961	Petromyzon_marinus
ENSVVUG00000012357	RPUSD1	100	71.475	ENSPCIG00000021216	-	94	71.475	Phascolarctos_cinereus
ENSVVUG00000012357	RPUSD1	98	59.532	ENSPFOG00000007946	rpusd1	98	59.532	Poecilia_formosa
ENSVVUG00000012357	RPUSD1	98	59.532	ENSPLAG00000011925	rpusd1	98	59.532	Poecilia_latipinna
ENSVVUG00000012357	RPUSD1	98	59.197	ENSPMEG00000002910	rpusd1	98	59.197	Poecilia_mexicana
ENSVVUG00000012357	RPUSD1	98	59.667	ENSPREG00000019851	rpusd1	98	59.667	Poecilia_reticulata
ENSVVUG00000012357	RPUSD1	99	71.096	ENSPCAG00000002258	RPUSD1	99	71.096	Procavia_capensis
ENSVVUG00000012357	RPUSD1	100	83.654	ENSPCOG00000022582	RPUSD1	100	83.654	Propithecus_coquereli
ENSVVUG00000012357	RPUSD1	100	80.831	ENSPVAG00000013104	RPUSD1	100	81.410	Pteropus_vampyrus
ENSVVUG00000012357	RPUSD1	98	59.661	ENSPNYG00000024076	rpusd1	98	59.661	Pundamilia_nyererei
ENSVVUG00000012357	RPUSD1	99	58.194	ENSPNAG00000013806	rpusd1	100	58.194	Pygocentrus_nattereri
ENSVVUG00000012357	RPUSD1	100	83.660	ENSRNOG00000023639	Rpusd1	100	83.713	Rattus_norvegicus
ENSVVUG00000012357	RPUSD1	99	80.064	ENSRBIG00000030238	RPUSD1	99	80.386	Rhinopithecus_bieti
ENSVVUG00000012357	RPUSD1	99	80.064	ENSRROG00000036663	RPUSD1	99	80.386	Rhinopithecus_roxellana
ENSVVUG00000012357	RPUSD1	99	83.389	ENSSBOG00000033063	RPUSD1	99	83.389	Saimiri_boliviensis_boliviensis
ENSVVUG00000012357	RPUSD1	100	70.164	ENSSHAG00000013500	RPUSD1	100	70.164	Sarcophilus_harrisii
ENSVVUG00000012357	RPUSD1	99	61.794	ENSSFOG00015014394	rpusd1	99	61.794	Scleropages_formosus
ENSVVUG00000012357	RPUSD1	98	56.393	ENSSMAG00000008045	rpusd1	91	57.049	Scophthalmus_maximus
ENSVVUG00000012357	RPUSD1	84	66.403	ENSSDUG00000001829	rpusd1	95	59.672	Seriola_dumerili
ENSVVUG00000012357	RPUSD1	84	66.403	ENSSLDG00000020853	rpusd1	95	59.672	Seriola_lalandi_dorsalis
ENSVVUG00000012357	RPUSD1	55	88.623	ENSSARG00000011187	-	100	88.623	Sorex_araneus
ENSVVUG00000012357	RPUSD1	62	56.477	ENSSPUG00000005119	-	100	56.477	Sphenodon_punctatus
ENSVVUG00000012357	RPUSD1	98	58.033	ENSSPAG00000012708	rpusd1	98	58.689	Stegastes_partitus
ENSVVUG00000012357	RPUSD1	100	81.731	ENSSSCG00000008000	RPUSD1	99	85.214	Sus_scrofa
ENSVVUG00000012357	RPUSD1	84	74.902	ENSTGUG00000015375	RPUSD1	100	74.902	Taeniopygia_guttata
ENSVVUG00000012357	RPUSD1	98	56.863	ENSTRUG00000003041	rpusd1	98	56.863	Takifugu_rubripes
ENSVVUG00000012357	RPUSD1	98	55.405	ENSTNIG00000002660	rpusd1	99	55.405	Tetraodon_nigroviridis
ENSVVUG00000012357	RPUSD1	99	84.566	ENSTTRG00000010167	RPUSD1	99	84.566	Tursiops_truncatus
ENSVVUG00000012357	RPUSD1	100	94.702	ENSUAMG00000012736	RPUSD1	100	94.702	Ursus_americanus
ENSVVUG00000012357	RPUSD1	100	94.702	ENSUMAG00000021174	RPUSD1	100	94.702	Ursus_maritimus
ENSVVUG00000012357	RPUSD1	100	62.500	ENSXETG00000007184	rpusd1	100	62.500	Xenopus_tropicalis
ENSVVUG00000012357	RPUSD1	98	59.000	ENSXCOG00000017930	rpusd1	98	59.000	Xiphophorus_couchianus
ENSVVUG00000012357	RPUSD1	98	58.667	ENSXMAG00000024084	rpusd1	98	58.667	Xiphophorus_maculatus