EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000012386 (Gene tree)
Gene ID: -
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 18373 bases
Position: chrNBDQ01000084.1:5086017-5104389
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000016813	zf-C3HC	PF07967.13	1e-35	1	1
ENSVVUP00000016813	Rsm1	PF08600.10	1.7e-15	1	2
ENSVVUP00000016813	Rsm1	PF08600.10	1.7e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000022143	ZC3HC1-201	1449	-	ENSVVUP00000016813	482 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000012386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000012386's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000012386	ZC3HC1	99	92.708	ENSG00000091732	ZC3HC1	96	92.708	Homo_sapiens
ENSVVUG00000012386	ZC3HC1	93	45.299	ENSAPOG00000009078	zc3hc1	90	45.085	Acanthochromis_polyacanthus
ENSVVUG00000012386	ZC3HC1	99	93.555	ENSAMEG00000005425	ZC3HC1	95	93.555	Ailuropoda_melanoleuca
ENSVVUG00000012386	ZC3HC1	94	43.191	ENSACIG00000019513	zc3hc1	90	43.008	Amphilophus_citrinellus
ENSVVUG00000012386	ZC3HC1	93	45.842	ENSAOCG00000024310	zc3hc1	90	45.629	Amphiprion_ocellaris
ENSVVUG00000012386	ZC3HC1	93	45.842	ENSAPEG00000004907	zc3hc1	90	45.629	Amphiprion_percula
ENSVVUG00000012386	ZC3HC1	84	47.754	ENSATEG00000016898	zc3hc1	85	47.887	Anabas_testudineus
ENSVVUG00000012386	ZC3HC1	87	60.142	ENSAPLG00000003832	ZC3HC1	94	60.142	Anas_platyrhynchos
ENSVVUG00000012386	ZC3HC1	99	59.960	ENSACAG00000001638	ZC3HC1	95	59.960	Anolis_carolinensis
ENSVVUG00000012386	ZC3HC1	99	90.021	ENSANAG00000022213	ZC3HC1	96	90.021	Aotus_nancymaae
ENSVVUG00000012386	ZC3HC1	87	44.671	ENSACLG00000025033	zc3hc1	92	44.444	Astatotilapia_calliptera
ENSVVUG00000012386	ZC3HC1	95	44.350	ENSAMXG00000036792	zc3hc1	96	43.497	Astyanax_mexicanus
ENSVVUG00000012386	ZC3HC1	99	90.417	ENSBTAG00000011247	ZC3HC1	96	90.417	Bos_taurus
ENSVVUG00000012386	ZC3HC1	99	90.417	ENSCJAG00000010536	ZC3HC1	96	90.417	Callithrix_jacchus
ENSVVUG00000012386	ZC3HC1	99	99.167	ENSCAFG00000031850	-	96	99.167	Canis_familiaris
ENSVVUG00000012386	ZC3HC1	99	98.965	ENSCAFG00000001499	-	94	98.965	Canis_familiaris
ENSVVUG00000012386	ZC3HC1	99	98.750	ENSCAFG00000029401	-	94	98.750	Canis_familiaris
ENSVVUG00000012386	ZC3HC1	99	98.750	ENSCAFG00000028735	-	96	98.750	Canis_familiaris
ENSVVUG00000012386	ZC3HC1	99	97.925	ENSCAFG00020023333	-	96	97.925	Canis_lupus_dingo
ENSVVUG00000012386	ZC3HC1	99	98.958	ENSCAFG00020006829	-	96	98.958	Canis_lupus_dingo
ENSVVUG00000012386	ZC3HC1	99	83.925	ENSCHIG00000014103	ZC3HC1	95	83.925	Capra_hircus
ENSVVUG00000012386	ZC3HC1	99	88.542	ENSTSYG00000002843	ZC3HC1	96	88.542	Carlito_syrichta
ENSVVUG00000012386	ZC3HC1	89	62.558	ENSCAPG00000016300	ZC3HC1	93	77.982	Cavia_aperea
ENSVVUG00000012386	ZC3HC1	100	84.025	ENSCPOG00000014034	ZC3HC1	100	83.610	Cavia_porcellus
ENSVVUG00000012386	ZC3HC1	99	72.917	ENSCCAG00000020384	ZC3HC1	90	90.244	Cebus_capucinus
ENSVVUG00000012386	ZC3HC1	99	92.500	ENSCATG00000023130	ZC3HC1	96	92.500	Cercocebus_atys
ENSVVUG00000012386	ZC3HC1	99	59.167	ENSCLAG00000008260	ZC3HC1	94	59.044	Chinchilla_lanigera
ENSVVUG00000012386	ZC3HC1	71	91.860	ENSCSAG00000009881	ZC3HC1	91	91.860	Chlorocebus_sabaeus
ENSVVUG00000012386	ZC3HC1	89	90.255	ENSCHOG00000011846	ZC3HC1	95	90.255	Choloepus_hoffmanni
ENSVVUG00000012386	ZC3HC1	95	68.615	ENSCPBG00000017519	ZC3HC1	95	67.708	Chrysemys_picta_bellii
ENSVVUG00000012386	ZC3HC1	99	92.292	ENSCANG00000029091	ZC3HC1	96	92.292	Colobus_angolensis_palliatus
ENSVVUG00000012386	ZC3HC1	100	86.722	ENSCGRG00001018805	Zc3hc1	100	86.722	Cricetulus_griseus_chok1gshd
ENSVVUG00000012386	ZC3HC1	99	85.833	ENSCGRG00000017114	Zc3hc1	96	85.833	Cricetulus_griseus_crigri
ENSVVUG00000012386	ZC3HC1	95	43.158	ENSCSEG00000009284	zc3hc1	89	42.947	Cynoglossus_semilaevis
ENSVVUG00000012386	ZC3HC1	93	43.312	ENSCVAG00000011566	zc3hc1	90	43.100	Cyprinodon_variegatus
ENSVVUG00000012386	ZC3HC1	94	47.537	ENSDARG00000062651	zc3hc1	91	47.537	Danio_rerio
ENSVVUG00000012386	ZC3HC1	99	89.167	ENSDNOG00000045016	ZC3HC1	96	89.167	Dasypus_novemcinctus
ENSVVUG00000012386	ZC3HC1	99	78.750	ENSDORG00000008697	Zc3hc1	95	78.750	Dipodomys_ordii
ENSVVUG00000012386	ZC3HC1	89	92.093	ENSEASG00005008789	ZC3HC1	92	92.093	Equus_asinus_asinus
ENSVVUG00000012386	ZC3HC1	99	91.476	ENSECAG00000017886	ZC3HC1	96	91.476	Equus_caballus
ENSVVUG00000012386	ZC3HC1	83	79.286	ENSEEUG00000003123	ZC3HC1	79	79.286	Erinaceus_europaeus
ENSVVUG00000012386	ZC3HC1	93	44.043	ENSELUG00000023168	zc3hc1	92	44.650	Esox_lucius
ENSVVUG00000012386	ZC3HC1	99	93.125	ENSFCAG00000010429	ZC3HC1	96	93.125	Felis_catus
ENSVVUG00000012386	ZC3HC1	89	58.784	ENSFALG00000005006	ZC3HC1	95	58.784	Ficedula_albicollis
ENSVVUG00000012386	ZC3HC1	99	86.667	ENSFDAG00000019897	ZC3HC1	96	86.667	Fukomys_damarensis
ENSVVUG00000012386	ZC3HC1	94	43.041	ENSFHEG00000020149	zc3hc1	90	42.457	Fundulus_heteroclitus
ENSVVUG00000012386	ZC3HC1	93	41.921	ENSGMOG00000002914	zc3hc1	90	42.048	Gadus_morhua
ENSVVUG00000012386	ZC3HC1	99	61.123	ENSGALG00000008003	ZC3HC1	95	61.123	Gallus_gallus
ENSVVUG00000012386	ZC3HC1	94	44.206	ENSGAFG00000016095	zc3hc1	90	44.017	Gambusia_affinis
ENSVVUG00000012386	ZC3HC1	93	45.161	ENSGACG00000019706	zc3hc1	90	45.182	Gasterosteus_aculeatus
ENSVVUG00000012386	ZC3HC1	76	69.755	ENSGAGG00000016106	ZC3HC1	94	69.755	Gopherus_agassizii
ENSVVUG00000012386	ZC3HC1	99	92.500	ENSGGOG00000015504	ZC3HC1	96	92.500	Gorilla_gorilla
ENSVVUG00000012386	ZC3HC1	92	43.844	ENSHBUG00000008347	zc3hc1	89	43.629	Haplochromis_burtoni
ENSVVUG00000012386	ZC3HC1	100	87.552	ENSHGLG00000005085	ZC3HC1	100	87.552	Heterocephalus_glaber_female
ENSVVUG00000012386	ZC3HC1	100	87.552	ENSHGLG00100011395	ZC3HC1	100	87.552	Heterocephalus_glaber_male
ENSVVUG00000012386	ZC3HC1	93	43.791	ENSHCOG00000014309	zc3hc1	90	43.478	Hippocampus_comes
ENSVVUG00000012386	ZC3HC1	99	89.583	ENSSTOG00000023599	-	96	89.583	Ictidomys_tridecemlineatus
ENSVVUG00000012386	ZC3HC1	93	45.671	ENSKMAG00000015315	zc3hc1	83	45.238	Kryptolebias_marmoratus
ENSVVUG00000012386	ZC3HC1	94	44.748	ENSLBEG00000017325	zc3hc1	90	44.235	Labrus_bergylta
ENSVVUG00000012386	ZC3HC1	82	55.474	ENSLACG00000013032	ZC3HC1	97	54.015	Latimeria_chalumnae
ENSVVUG00000012386	ZC3HC1	99	51.852	ENSLOCG00000015963	zc3hc1	95	52.156	Lepisosteus_oculatus
ENSVVUG00000012386	ZC3HC1	99	88.223	ENSLAFG00000001292	ZC3HC1	96	88.223	Loxodonta_africana
ENSVVUG00000012386	ZC3HC1	99	92.708	ENSMFAG00000030176	ZC3HC1	96	92.708	Macaca_fascicularis
ENSVVUG00000012386	ZC3HC1	99	91.684	ENSMMUG00000006155	ZC3HC1	96	91.684	Macaca_mulatta
ENSVVUG00000012386	ZC3HC1	99	92.917	ENSMNEG00000011833	ZC3HC1	96	92.917	Macaca_nemestrina
ENSVVUG00000012386	ZC3HC1	99	92.708	ENSMLEG00000027328	ZC3HC1	96	92.708	Mandrillus_leucophaeus
ENSVVUG00000012386	ZC3HC1	94	45.435	ENSMAMG00000010691	zc3hc1	90	45.378	Mastacembelus_armatus
ENSVVUG00000012386	ZC3HC1	92	43.629	ENSMZEG00005007142	zc3hc1	89	43.413	Maylandia_zebra
ENSVVUG00000012386	ZC3HC1	99	60.000	ENSMGAG00000002977	ZC3HC1	95	60.612	Meleagris_gallopavo
ENSVVUG00000012386	ZC3HC1	80	80.662	ENSMAUG00000017032	Zc3hc1	87	80.662	Mesocricetus_auratus
ENSVVUG00000012386	ZC3HC1	99	90.625	ENSMICG00000009167	ZC3HC1	96	90.625	Microcebus_murinus
ENSVVUG00000012386	ZC3HC1	100	85.892	ENSMOCG00000015239	Zc3hc1	100	85.892	Microtus_ochrogaster
ENSVVUG00000012386	ZC3HC1	84	43.868	ENSMMOG00000002204	zc3hc1	92	43.396	Mola_mola
ENSVVUG00000012386	ZC3HC1	99	62.978	ENSMODG00000014630	ZC3HC1	95	62.978	Monodelphis_domestica
ENSVVUG00000012386	ZC3HC1	93	44.206	ENSMALG00000014447	zc3hc1	90	44.609	Monopterus_albus
ENSVVUG00000012386	ZC3HC1	100	86.307	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	86.307	Mus_caroli
ENSVVUG00000012386	ZC3HC1	100	85.685	ENSMUSG00000039130	Zc3hc1	100	85.685	Mus_musculus
ENSVVUG00000012386	ZC3HC1	100	79.253	MGP_PahariEiJ_G0021941	Zc3hc1	100	79.253	Mus_pahari
ENSVVUG00000012386	ZC3HC1	99	86.042	MGP_SPRETEiJ_G0029183	Zc3hc1	96	86.042	Mus_spretus
ENSVVUG00000012386	ZC3HC1	100	93.568	ENSMPUG00000005297	ZC3HC1	95	93.568	Mustela_putorius_furo
ENSVVUG00000012386	ZC3HC1	66	88.715	ENSMLUG00000029228	-	92	88.715	Myotis_lucifugus
ENSVVUG00000012386	ZC3HC1	99	90.062	ENSMLUG00000000063	-	96	90.062	Myotis_lucifugus
ENSVVUG00000012386	ZC3HC1	100	87.164	ENSNGAG00000019014	Zc3hc1	100	87.164	Nannospalax_galili
ENSVVUG00000012386	ZC3HC1	92	43.844	ENSNBRG00000004577	zc3hc1	89	43.629	Neolamprologus_brichardi
ENSVVUG00000012386	ZC3HC1	99	91.458	ENSNLEG00000012698	ZC3HC1	96	91.458	Nomascus_leucogenys
ENSVVUG00000012386	ZC3HC1	98	78.556	ENSMEUG00000011023	ZC3HC1	94	78.556	Notamacropus_eugenii
ENSVVUG00000012386	ZC3HC1	68	81.395	ENSOPRG00000007867	-	67	81.395	Ochotona_princeps
ENSVVUG00000012386	ZC3HC1	99	83.958	ENSODEG00000014604	ZC3HC1	95	85.112	Octodon_degus
ENSVVUG00000012386	ZC3HC1	92	44.060	ENSONIG00000011644	zc3hc1	89	43.844	Oreochromis_niloticus
ENSVVUG00000012386	ZC3HC1	89	67.647	ENSOANG00000011460	ZC3HC1	95	67.647	Ornithorhynchus_anatinus
ENSVVUG00000012386	ZC3HC1	99	84.886	ENSOCUG00000017137	ZC3HC1	96	84.886	Oryctolagus_cuniculus
ENSVVUG00000012386	ZC3HC1	94	44.111	ENSORLG00000014409	zc3hc1	89	44.111	Oryzias_latipes
ENSVVUG00000012386	ZC3HC1	94	43.897	ENSORLG00020015874	zc3hc1	89	43.897	Oryzias_latipes_hni
ENSVVUG00000012386	ZC3HC1	94	43.469	ENSORLG00015014641	zc3hc1	89	43.469	Oryzias_latipes_hsok
ENSVVUG00000012386	ZC3HC1	95	45.022	ENSOMEG00000000215	zc3hc1	90	45.022	Oryzias_melastigma
ENSVVUG00000012386	ZC3HC1	95	45.022	ENSOMEG00000020604	zc3hc1	90	45.022	Oryzias_melastigma
ENSVVUG00000012386	ZC3HC1	99	84.792	ENSOGAG00000026193	ZC3HC1	96	84.792	Otolemur_garnettii
ENSVVUG00000012386	ZC3HC1	99	90.871	ENSOARG00000004907	ZC3HC1	94	90.871	Ovis_aries
ENSVVUG00000012386	ZC3HC1	99	92.708	ENSPPAG00000043172	ZC3HC1	96	92.708	Pan_paniscus
ENSVVUG00000012386	ZC3HC1	99	92.708	ENSPPRG00000001004	ZC3HC1	96	92.708	Panthera_pardus
ENSVVUG00000012386	ZC3HC1	99	93.125	ENSPTIG00000007823	ZC3HC1	96	93.125	Panthera_tigris_altaica
ENSVVUG00000012386	ZC3HC1	99	92.292	ENSPTRG00000019685	ZC3HC1	96	92.292	Pan_troglodytes
ENSVVUG00000012386	ZC3HC1	99	91.268	ENSPANG00000014229	ZC3HC1	96	91.268	Papio_anubis
ENSVVUG00000012386	ZC3HC1	94	48.261	ENSPKIG00000007172	zc3hc1	91	48.261	Paramormyrops_kingsleyae
ENSVVUG00000012386	ZC3HC1	92	62.637	ENSPSIG00000016646	ZC3HC1	95	60.123	Pelodiscus_sinensis
ENSVVUG00000012386	ZC3HC1	95	41.788	ENSPMGG00000003548	zc3hc1	92	42.204	Periophthalmus_magnuspinnatus
ENSVVUG00000012386	ZC3HC1	100	86.722	ENSPEMG00000000514	Zc3hc1	100	86.722	Peromyscus_maniculatus_bairdii
ENSVVUG00000012386	ZC3HC1	99	74.739	ENSPCIG00000020619	ZC3HC1	94	77.929	Phascolarctos_cinereus
ENSVVUG00000012386	ZC3HC1	94	43.991	ENSPFOG00000003466	zc3hc1	90	43.803	Poecilia_formosa
ENSVVUG00000012386	ZC3HC1	94	43.562	ENSPLAG00000022211	zc3hc1	90	43.376	Poecilia_latipinna
ENSVVUG00000012386	ZC3HC1	94	43.991	ENSPMEG00000001458	zc3hc1	90	43.803	Poecilia_mexicana
ENSVVUG00000012386	ZC3HC1	93	44.301	ENSPREG00000004004	zc3hc1	90	44.111	Poecilia_reticulata
ENSVVUG00000012386	ZC3HC1	99	84.232	ENSPPYG00000017998	ZC3HC1	96	84.232	Pongo_abelii
ENSVVUG00000012386	ZC3HC1	91	84.018	ENSPCAG00000001182	ZC3HC1	95	84.018	Procavia_capensis
ENSVVUG00000012386	ZC3HC1	99	91.667	ENSPCOG00000017354	ZC3HC1	96	91.667	Propithecus_coquereli
ENSVVUG00000012386	ZC3HC1	99	84.375	ENSPVAG00000003195	ZC3HC1	96	84.375	Pteropus_vampyrus
ENSVVUG00000012386	ZC3HC1	92	43.629	ENSPNYG00000020692	zc3hc1	89	43.413	Pundamilia_nyererei
ENSVVUG00000012386	ZC3HC1	93	45.695	ENSPNAG00000020746	zc3hc1	91	44.714	Pygocentrus_nattereri
ENSVVUG00000012386	ZC3HC1	99	85.655	ENSRNOG00000010154	Zc3hc1	96	85.655	Rattus_norvegicus
ENSVVUG00000012386	ZC3HC1	89	92.575	ENSRBIG00000029409	ZC3HC1	95	92.575	Rhinopithecus_bieti
ENSVVUG00000012386	ZC3HC1	99	92.292	ENSRROG00000041831	ZC3HC1	96	92.292	Rhinopithecus_roxellana
ENSVVUG00000012386	ZC3HC1	87	89.706	ENSSBOG00000032787	ZC3HC1	95	89.706	Saimiri_boliviensis_boliviensis
ENSVVUG00000012386	ZC3HC1	91	78.054	ENSSHAG00000002529	ZC3HC1	95	78.054	Sarcophilus_harrisii
ENSVVUG00000012386	ZC3HC1	94	49.571	ENSSFOG00015003667	zc3hc1	87	48.180	Scleropages_formosus
ENSVVUG00000012386	ZC3HC1	94	44.231	ENSSMAG00000000647	zc3hc1	81	44.872	Scophthalmus_maximus
ENSVVUG00000012386	ZC3HC1	94	45.940	ENSSDUG00000004241	zc3hc1	88	45.745	Seriola_dumerili
ENSVVUG00000012386	ZC3HC1	94	45.726	ENSSLDG00000025056	zc3hc1	88	45.532	Seriola_lalandi_dorsalis
ENSVVUG00000012386	ZC3HC1	99	80.126	ENSSARG00000012013	ZC3HC1	95	80.126	Sorex_araneus
ENSVVUG00000012386	ZC3HC1	90	58.277	ENSSPUG00000000778	ZC3HC1	86	58.277	Sphenodon_punctatus
ENSVVUG00000012386	ZC3HC1	93	46.253	ENSSPAG00000020041	zc3hc1	90	46.055	Stegastes_partitus
ENSVVUG00000012386	ZC3HC1	99	90.000	ENSSSCG00000016565	ZC3HC1	96	90.000	Sus_scrofa
ENSVVUG00000012386	ZC3HC1	92	42.641	ENSTRUG00000020077	zc3hc1	89	42.241	Takifugu_rubripes
ENSVVUG00000012386	ZC3HC1	92	43.107	ENSTNIG00000007585	zc3hc1	93	42.982	Tetraodon_nigroviridis
ENSVVUG00000012386	ZC3HC1	99	79.792	ENSTBEG00000005216	ZC3HC1	96	79.792	Tupaia_belangeri
ENSVVUG00000012386	ZC3HC1	95	91.048	ENSTTRG00000008458	ZC3HC1	95	91.048	Tursiops_truncatus
ENSVVUG00000012386	ZC3HC1	99	93.958	ENSUAMG00000020249	ZC3HC1	96	93.958	Ursus_americanus
ENSVVUG00000012386	ZC3HC1	99	93.542	ENSUMAG00000009268	ZC3HC1	96	93.542	Ursus_maritimus
ENSVVUG00000012386	ZC3HC1	76	92.857	ENSVPAG00000010846	ZC3HC1	73	92.857	Vicugna_pacos
ENSVVUG00000012386	ZC3HC1	95	52.575	ENSXETG00000033900	zc3hc1	95	52.575	Xenopus_tropicalis
ENSVVUG00000012386	ZC3HC1	94	43.441	ENSXCOG00000013570	zc3hc1	90	43.255	Xiphophorus_couchianus
ENSVVUG00000012386	ZC3HC1	86	45.455	ENSXMAG00000010979	zc3hc1	89	45.244	Xiphophorus_maculatus