EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000012518 (Gene tree)
Gene ID: -
Gene Symbol: TRNAU1AP
Alias: FLJ20503|SECP43|TRSPAP1
Full Name: tRNA selenocysteine 1 associated protein 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 22980 bases
Position: chrNBDQ01000104.1:2429544-2452523
Accession: 30813
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000017027	RRM_1	PF00076.22	3.7e-27	1	2
ENSVVUP00000017027	RRM_1	PF00076.22	3.7e-27	2	2
ENSVVUP00000017006	RRM_1	PF00076.22	6.2e-26	1	2
ENSVVUP00000017006	RRM_1	PF00076.22	6.2e-26	2	2
ENSVVUP00000017017	RRM_1	PF00076.22	7.1e-26	1	2
ENSVVUP00000017017	RRM_1	PF00076.22	7.1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000022399	TRNAU1AP-202	1594	-	ENSVVUP00000017017	316 (aa)	-	-
ENSVVUT00000022388	TRNAU1AP-201	1541	-	ENSVVUP00000017006	307 (aa)	-	-
ENSVVUT00000022411	TRNAU1AP-203	1109	-	ENSVVUP00000017027	296 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000012518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000012518's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000012518	TRNAU1AP	53	32.278	ENSVVUG00000011060	-	69	32.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSG00000180098	TRNAU1AP	99	97.887	Homo_sapiens
ENSVVUG00000012518	TRNAU1AP	92	57.237	ENSAPOG00000007148	TRNAU1AP	98	57.823	Acanthochromis_polyacanthus
ENSVVUG00000012518	TRNAU1AP	93	96.831	ENSAMEG00000011367	TRNAU1AP	99	96.831	Ailuropoda_melanoleuca
ENSVVUG00000012518	TRNAU1AP	85	68.235	ENSACIG00000004161	trnau1apa	98	58.784	Amphilophus_citrinellus
ENSVVUG00000012518	TRNAU1AP	91	57.807	ENSAOCG00000008056	trnau1apa	97	57.807	Amphiprion_ocellaris
ENSVVUG00000012518	TRNAU1AP	91	57.807	ENSAPEG00000008868	trnau1apa	97	57.807	Amphiprion_percula
ENSVVUG00000012518	TRNAU1AP	89	58.923	ENSATEG00000012140	trnau1apa	98	55.484	Anabas_testudineus
ENSVVUG00000012518	TRNAU1AP	88	93.680	ENSAPLG00000002606	TRNAU1AP	97	94.382	Anas_platyrhynchos
ENSVVUG00000012518	TRNAU1AP	63	51.562	ENSACAG00000004205	-	73	51.562	Anolis_carolinensis
ENSVVUG00000012518	TRNAU1AP	90	77.338	ENSACAG00000003995	-	97	77.338	Anolis_carolinensis
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSANAG00000018976	TRNAU1AP	99	97.887	Aotus_nancymaae
ENSVVUG00000012518	TRNAU1AP	92	58.194	ENSACLG00000018515	trnau1apa	98	59.596	Astatotilapia_calliptera
ENSVVUG00000012518	TRNAU1AP	90	56.071	ENSAMXG00000013750	trnau1apa	91	56.071	Astyanax_mexicanus
ENSVVUG00000012518	TRNAU1AP	88	62.921	ENSAMXG00000029240	-	96	62.921	Astyanax_mexicanus
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSBTAG00000010393	TRNAU1AP	99	97.535	Bos_taurus
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSCJAG00000009717	TRNAU1AP	99	97.887	Callithrix_jacchus
ENSVVUG00000012518	TRNAU1AP	93	98.239	ENSCAFG00000011735	TRNAU1AP	99	98.239	Canis_familiaris
ENSVVUG00000012518	TRNAU1AP	100	98.986	ENSCAFG00020023584	TRNAU1AP	99	98.239	Canis_lupus_dingo
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSCHIG00000023215	TRNAU1AP	99	97.183	Capra_hircus
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSTSYG00000003506	TRNAU1AP	99	97.535	Carlito_syrichta
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSCPOG00000001925	TRNAU1AP	99	97.887	Cavia_porcellus
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSCCAG00000037506	TRNAU1AP	99	97.887	Cebus_capucinus
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSCATG00000044617	TRNAU1AP	99	97.535	Cercocebus_atys
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSCLAG00000008223	TRNAU1AP	99	97.183	Chinchilla_lanigera
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSCSAG00000001014	TRNAU1AP	99	97.535	Chlorocebus_sabaeus
ENSVVUG00000012518	TRNAU1AP	89	94.526	ENSCPBG00000000121	TRNAU1AP	100	94.526	Chrysemys_picta_bellii
ENSVVUG00000012518	TRNAU1AP	57	51.462	ENSCSAVG00000011781	-	90	51.462	Ciona_savignyi
ENSVVUG00000012518	TRNAU1AP	93	85.915	ENSCANG00000041949	TRNAU1AP	100	99.435	Colobus_angolensis_palliatus
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSCGRG00001004713	Trnau1ap	99	97.183	Cricetulus_griseus_chok1gshd
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSCGRG00000014532	Trnau1ap	99	97.183	Cricetulus_griseus_crigri
ENSVVUG00000012518	TRNAU1AP	91	57.718	ENSCSEG00000006663	trnau1apa	95	56.333	Cynoglossus_semilaevis
ENSVVUG00000012518	TRNAU1AP	86	60.507	ENSCVAG00000018069	trnau1apa	94	59.341	Cyprinodon_variegatus
ENSVVUG00000012518	TRNAU1AP	90	51.943	ENSDARG00000101323	trnau1apa	89	50.352	Danio_rerio
ENSVVUG00000012518	TRNAU1AP	65	77.604	ENSDNOG00000047959	-	94	80.110	Dasypus_novemcinctus
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSDNOG00000033009	TRNAU1AP	99	97.535	Dasypus_novemcinctus
ENSVVUG00000012518	TRNAU1AP	93	92.254	ENSDORG00000006349	Trnau1ap	100	100.000	Dipodomys_ordii
ENSVVUG00000012518	TRNAU1AP	90	37.423	FBgn0031607	CG15440	51	52.023	Drosophila_melanogaster
ENSVVUG00000012518	TRNAU1AP	80	94.286	ENSETEG00000012594	TRNAU1AP	100	94.286	Echinops_telfairi
ENSVVUG00000012518	TRNAU1AP	53	59.341	ENSEBUG00000006349	-	60	59.341	Eptatretus_burgeri
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSEASG00005010062	TRNAU1AP	99	97.887	Equus_asinus_asinus
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSECAG00000012980	TRNAU1AP	99	97.887	Equus_caballus
ENSVVUG00000012518	TRNAU1AP	89	68.085	ENSELUG00000022790	-	94	50.370	Esox_lucius
ENSVVUG00000012518	TRNAU1AP	89	62.807	ENSELUG00000017686	trnau1apa	94	62.681	Esox_lucius
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSFCAG00000013401	TRNAU1AP	99	97.887	Felis_catus
ENSVVUG00000012518	TRNAU1AP	89	93.431	ENSFALG00000001371	TRNAU1AP	100	93.431	Ficedula_albicollis
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSFDAG00000018599	TRNAU1AP	99	97.183	Fukomys_damarensis
ENSVVUG00000012518	TRNAU1AP	77	60.816	ENSFHEG00000018232	trnau1apa	86	56.746	Fundulus_heteroclitus
ENSVVUG00000012518	TRNAU1AP	88	53.169	ENSGMOG00000016508	trnau1apa	92	54.255	Gadus_morhua
ENSVVUG00000012518	TRNAU1AP	93	91.197	ENSGALG00000001310	-	99	91.197	Gallus_gallus
ENSVVUG00000012518	TRNAU1AP	63	48.826	ENSGALG00000012721	C2H6orf52	95	44.402	Gallus_gallus
ENSVVUG00000012518	TRNAU1AP	76	58.403	ENSGAFG00000004928	trnau1apa	90	59.244	Gambusia_affinis
ENSVVUG00000012518	TRNAU1AP	91	59.450	ENSGACG00000001443	trnau1apa	95	58.824	Gasterosteus_aculeatus
ENSVVUG00000012518	TRNAU1AP	89	94.891	ENSGAGG00000004940	TRNAU1AP	100	94.891	Gopherus_agassizii
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSGGOG00000003511	TRNAU1AP	99	97.887	Gorilla_gorilla
ENSVVUG00000012518	TRNAU1AP	80	71.852	ENSHBUG00000002510	trnau1apa	98	58.609	Haplochromis_burtoni
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSHGLG00000010380	TRNAU1AP	99	97.183	Heterocephalus_glaber_female
ENSVVUG00000012518	TRNAU1AP	88	98.893	ENSHGLG00100012699	TRNAU1AP	95	98.893	Heterocephalus_glaber_male
ENSVVUG00000012518	TRNAU1AP	93	56.291	ENSHCOG00000014770	trnau1apa	97	54.397	Hippocampus_comes
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSSTOG00000000079	TRNAU1AP	99	97.887	Ictidomys_tridecemlineatus
ENSVVUG00000012518	TRNAU1AP	92	97.880	ENSJJAG00000010128	Trnau1ap	99	96.831	Jaculus_jaculus
ENSVVUG00000012518	TRNAU1AP	89	59.375	ENSKMAG00000001230	trnau1apa	93	57.840	Kryptolebias_marmoratus
ENSVVUG00000012518	TRNAU1AP	89	59.932	ENSLBEG00000011683	trnau1apa	93	59.247	Labrus_bergylta
ENSVVUG00000012518	TRNAU1AP	92	71.731	ENSLACG00000005541	TRNAU1AP	99	71.479	Latimeria_chalumnae
ENSVVUG00000012518	TRNAU1AP	92	71.579	ENSLOCG00000004041	trnau1apa	99	70.526	Lepisosteus_oculatus
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSLAFG00000007628	TRNAU1AP	99	97.535	Loxodonta_africana
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSMFAG00000043751	TRNAU1AP	99	97.535	Macaca_fascicularis
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSMMUG00000006561	TRNAU1AP	99	97.535	Macaca_mulatta
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSMNEG00000044201	TRNAU1AP	99	97.535	Macaca_nemestrina
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSMLEG00000015649	TRNAU1AP	99	97.535	Mandrillus_leucophaeus
ENSVVUG00000012518	TRNAU1AP	91	58.361	ENSMAMG00000001247	trnau1apa	97	58.188	Mastacembelus_armatus
ENSVVUG00000012518	TRNAU1AP	92	58.194	ENSMZEG00005017722	trnau1apa	98	59.596	Maylandia_zebra
ENSVVUG00000012518	TRNAU1AP	91	92.806	ENSMGAG00000002105	TRNAU1AP	100	92.806	Meleagris_gallopavo
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSMICG00000008386	TRNAU1AP	100	98.870	Microcebus_murinus
ENSVVUG00000012518	TRNAU1AP	93	96.831	ENSMOCG00000011189	Trnau1ap	99	96.831	Microtus_ochrogaster
ENSVVUG00000012518	TRNAU1AP	88	57.407	ENSMMOG00000012107	trnau1apa	91	57.407	Mola_mola
ENSVVUG00000012518	TRNAU1AP	93	93.310	ENSMODG00000010927	TRNAU1AP	99	93.310	Monodelphis_domestica
ENSVVUG00000012518	TRNAU1AP	89	60.274	ENSMALG00000016778	trnau1apa	94	57.534	Monopterus_albus
ENSVVUG00000012518	TRNAU1AP	93	96.831	MGP_CAROLIEiJ_G0026563	Trnau1ap	100	100.000	Mus_caroli
ENSVVUG00000012518	TRNAU1AP	93	96.831	ENSMUSG00000028898	Trnau1ap	100	100.000	Mus_musculus
ENSVVUG00000012518	TRNAU1AP	93	97.183	MGP_PahariEiJ_G0028896	Trnau1ap	100	100.000	Mus_pahari
ENSVVUG00000012518	TRNAU1AP	93	96.479	MGP_SPRETEiJ_G0027544	Trnau1ap	100	100.000	Mus_spretus
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSMPUG00000015511	TRNAU1AP	99	97.183	Mustela_putorius_furo
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSMLUG00000012586	TRNAU1AP	99	97.535	Myotis_lucifugus
ENSVVUG00000012518	TRNAU1AP	93	95.423	ENSNGAG00000015881	Trnau1ap	99	95.423	Nannospalax_galili
ENSVVUG00000012518	TRNAU1AP	91	57.785	ENSNBRG00000001758	trnau1apa	97	57.785	Neolamprologus_brichardi
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSNLEG00000009822	TRNAU1AP	99	97.887	Nomascus_leucogenys
ENSVVUG00000012518	TRNAU1AP	91	93.885	ENSMEUG00000006117	TRNAU1AP	100	93.885	Notamacropus_eugenii
ENSVVUG00000012518	TRNAU1AP	65	97.273	ENSOPRG00000007084	-	68	97.273	Ochotona_princeps
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSODEG00000002970	TRNAU1AP	99	97.535	Octodon_degus
ENSVVUG00000012518	TRNAU1AP	74	60.870	ENSONIG00000004715	trnau1apa	96	60.082	Oreochromis_niloticus
ENSVVUG00000012518	TRNAU1AP	93	73.776	ENSOANG00000005325	-	99	73.776	Ornithorhynchus_anatinus
ENSVVUG00000012518	TRNAU1AP	93	95.775	ENSOCUG00000011704	-	99	95.775	Oryctolagus_cuniculus
ENSVVUG00000012518	TRNAU1AP	82	75.889	ENSOCUG00000006834	-	99	73.913	Oryctolagus_cuniculus
ENSVVUG00000012518	TRNAU1AP	93	75.439	ENSOCUG00000002353	-	99	75.439	Oryctolagus_cuniculus
ENSVVUG00000012518	TRNAU1AP	91	58.214	ENSORLG00000010428	trnau1apa	95	56.207	Oryzias_latipes
ENSVVUG00000012518	TRNAU1AP	91	57.388	ENSORLG00020000926	trnau1ap	95	56.207	Oryzias_latipes_hni
ENSVVUG00000012518	TRNAU1AP	91	57.388	ENSORLG00015009858	trnau1ap	95	56.207	Oryzias_latipes_hsok
ENSVVUG00000012518	TRNAU1AP	91	58.419	ENSOMEG00000007873	trnau1apa	95	55.517	Oryzias_melastigma
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSOGAG00000002274	TRNAU1AP	99	97.535	Otolemur_garnettii
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSOARG00000002843	TRNAU1AP	99	97.183	Ovis_aries
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSPPAG00000033927	TRNAU1AP	99	97.887	Pan_paniscus
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSPPRG00000004416	TRNAU1AP	99	97.887	Panthera_pardus
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSPTIG00000016677	TRNAU1AP	99	97.887	Panthera_tigris_altaica
ENSVVUG00000012518	TRNAU1AP	87	80.812	ENSPTRG00000000434	-	97	79.705	Pan_troglodytes
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSPANG00000016019	TRNAU1AP	99	97.535	Papio_anubis
ENSVVUG00000012518	TRNAU1AP	89	58.246	ENSPKIG00000015511	trnau1apa	92	56.738	Paramormyrops_kingsleyae
ENSVVUG00000012518	TRNAU1AP	87	72.826	ENSPKIG00000022205	-	92	72.826	Paramormyrops_kingsleyae
ENSVVUG00000012518	TRNAU1AP	89	94.891	ENSPSIG00000006864	TRNAU1AP	100	94.891	Pelodiscus_sinensis
ENSVVUG00000012518	TRNAU1AP	90	60.791	ENSPMGG00000023893	trnau1apa	92	59.928	Periophthalmus_magnuspinnatus
ENSVVUG00000012518	TRNAU1AP	93	96.831	ENSPEMG00000007877	Trnau1ap	99	96.831	Peromyscus_maniculatus_bairdii
ENSVVUG00000012518	TRNAU1AP	75	60.987	ENSPMAG00000005934	trnau1apa	97	60.092	Petromyzon_marinus
ENSVVUG00000012518	TRNAU1AP	58	60.227	ENSPMAG00000000592	trnau1apa	97	60.227	Petromyzon_marinus
ENSVVUG00000012518	TRNAU1AP	88	56.294	ENSPFOG00000008100	trnau1apa	93	56.993	Poecilia_formosa
ENSVVUG00000012518	TRNAU1AP	85	56.679	ENSPLAG00000010236	trnau1apa	93	57.401	Poecilia_latipinna
ENSVVUG00000012518	TRNAU1AP	87	58.801	ENSPMEG00000016387	trnau1apa	91	57.143	Poecilia_mexicana
ENSVVUG00000012518	TRNAU1AP	87	53.903	ENSPREG00000019821	trnau1apa	84	65.476	Poecilia_reticulata
ENSVVUG00000012518	TRNAU1AP	83	85.992	ENSPPYG00000001639	-	100	86.434	Pongo_abelii
ENSVVUG00000012518	TRNAU1AP	93	98.592	ENSPCOG00000027712	-	100	98.870	Propithecus_coquereli
ENSVVUG00000012518	TRNAU1AP	91	82.014	ENSPCOG00000023470	-	99	82.014	Propithecus_coquereli
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSPVAG00000017214	TRNAU1AP	99	97.887	Pteropus_vampyrus
ENSVVUG00000012518	TRNAU1AP	92	57.237	ENSPNYG00000010130	trnau1apa	98	58.609	Pundamilia_nyererei
ENSVVUG00000012518	TRNAU1AP	93	51.852	ENSPNAG00000024905	trnau1apa	95	51.027	Pygocentrus_nattereri
ENSVVUG00000012518	TRNAU1AP	78	99.138	ENSRNOG00000055344	Trnau1ap	91	88.806	Rattus_norvegicus
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSRBIG00000029083	TRNAU1AP	99	97.887	Rhinopithecus_bieti
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSRROG00000029128	TRNAU1AP	99	97.887	Rhinopithecus_roxellana
ENSVVUG00000012518	TRNAU1AP	93	97.887	ENSSBOG00000021299	TRNAU1AP	99	97.887	Saimiri_boliviensis_boliviensis
ENSVVUG00000012518	TRNAU1AP	93	92.606	ENSSHAG00000008108	TRNAU1AP	99	92.606	Sarcophilus_harrisii
ENSVVUG00000012518	TRNAU1AP	92	52.922	ENSSMAG00000020851	trnau1apa	98	56.250	Scophthalmus_maximus
ENSVVUG00000012518	TRNAU1AP	89	58.020	ENSSDUG00000011734	trnau1apa	93	56.849	Seriola_dumerili
ENSVVUG00000012518	TRNAU1AP	89	68.382	ENSSLDG00000012101	trnau1apa	92	49.640	Seriola_lalandi_dorsalis
ENSVVUG00000012518	TRNAU1AP	91	98.201	ENSSARG00000007536	TRNAU1AP	100	98.201	Sorex_araneus
ENSVVUG00000012518	TRNAU1AP	57	82.386	ENSSPUG00000010415	-	100	82.386	Sphenodon_punctatus
ENSVVUG00000012518	TRNAU1AP	92	84.452	ENSSPUG00000010400	-	99	84.452	Sphenodon_punctatus
ENSVVUG00000012518	TRNAU1AP	89	58.703	ENSSPAG00000005029	trnau1apa	97	57.377	Stegastes_partitus
ENSVVUG00000012518	TRNAU1AP	93	98.258	ENSSSCG00000030284	TRNAU1AP	100	99.435	Sus_scrofa
ENSVVUG00000012518	TRNAU1AP	63	52.551	ENSTGUG00000005908	-	100	52.551	Taeniopygia_guttata
ENSVVUG00000012518	TRNAU1AP	91	93.885	ENSTGUG00000000735	-	100	93.885	Taeniopygia_guttata
ENSVVUG00000012518	TRNAU1AP	91	58.528	ENSTRUG00000003352	trnau1apa	97	57.860	Takifugu_rubripes
ENSVVUG00000012518	TRNAU1AP	88	58.596	ENSTNIG00000006129	trnau1apa	97	56.478	Tetraodon_nigroviridis
ENSVVUG00000012518	TRNAU1AP	80	87.755	ENSTBEG00000008049	-	100	87.755	Tupaia_belangeri
ENSVVUG00000012518	TRNAU1AP	93	97.535	ENSTTRG00000001854	TRNAU1AP	99	97.535	Tursiops_truncatus
ENSVVUG00000012518	TRNAU1AP	89	99.270	ENSUAMG00000008789	TRNAU1AP	100	99.270	Ursus_americanus
ENSVVUG00000012518	TRNAU1AP	93	97.183	ENSUMAG00000011068	TRNAU1AP	100	98.305	Ursus_maritimus
ENSVVUG00000012518	TRNAU1AP	93	87.197	ENSVPAG00000006778	TRNAU1AP	99	87.197	Vicugna_pacos
ENSVVUG00000012518	TRNAU1AP	89	55.052	ENSXMAG00000017361	trnau1apa	93	56.993	Xiphophorus_maculatus