EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000012559 (Gene tree)
Gene ID: -
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 16763 bases
Position: chrNBDQ01000041.1:3316248-3333010
Accession: 15762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000017051	HAT	PF02184.16	2.4e-41	1	2
ENSVVUP00000017051	HAT	PF02184.16	2.4e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000022449	CRNKL1-201	3431	-	ENSVVUP00000017051	834 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000012559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000012559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000012559	CRNKL1	95	87.097	ENSG00000101343	CRNKL1	100	96.798	Homo_sapiens
ENSVVUG00000012559	CRNKL1	82	86.569	ENSAPOG00000009705	crnkl1	97	86.418	Acanthochromis_polyacanthus
ENSVVUG00000012559	CRNKL1	97	88.341	ENSAMEG00000000270	CRNKL1	98	88.341	Ailuropoda_melanoleuca
ENSVVUG00000012559	CRNKL1	81	86.647	ENSACIG00000015267	crnkl1	89	86.547	Amphilophus_citrinellus
ENSVVUG00000012559	CRNKL1	82	86.715	ENSAOCG00000021964	crnkl1	90	86.618	Amphiprion_ocellaris
ENSVVUG00000012559	CRNKL1	82	86.569	ENSAPEG00000015041	crnkl1	90	86.471	Amphiprion_percula
ENSVVUG00000012559	CRNKL1	81	86.618	ENSATEG00000001068	crnkl1	89	86.519	Anabas_testudineus
ENSVVUG00000012559	CRNKL1	82	90.684	ENSAPLG00000013105	CRNKL1	98	92.548	Anas_platyrhynchos
ENSVVUG00000012559	CRNKL1	82	92.826	ENSACAG00000005284	CRNKL1	99	92.773	Anolis_carolinensis
ENSVVUG00000012559	CRNKL1	76	97.785	ENSANAG00000024889	CRNKL1	100	97.785	Aotus_nancymaae
ENSVVUG00000012559	CRNKL1	82	87.116	ENSACLG00000010813	crnkl1	89	87.649	Astatotilapia_calliptera
ENSVVUG00000012559	CRNKL1	80	88.102	ENSAMXG00000018334	crnkl1	92	86.029	Astyanax_mexicanus
ENSVVUG00000012559	CRNKL1	82	98.253	ENSBTAG00000008472	CRNKL1	99	98.253	Bos_taurus
ENSVVUG00000012559	CRNKL1	77	62.364	WBGene00019762	M03F8.3	91	61.765	Caenorhabditis_elegans
ENSVVUG00000012559	CRNKL1	82	96.943	ENSCJAG00000005393	CRNKL1	100	96.943	Callithrix_jacchus
ENSVVUG00000012559	CRNKL1	95	90.259	ENSCAFG00000005333	CRNKL1	97	99.716	Canis_familiaris
ENSVVUG00000012559	CRNKL1	82	100.000	ENSCAFG00020027488	CRNKL1	100	100.000	Canis_lupus_dingo
ENSVVUG00000012559	CRNKL1	82	97.089	ENSCHIG00000013171	CRNKL1	99	97.089	Capra_hircus
ENSVVUG00000012559	CRNKL1	82	97.962	ENSTSYG00000004197	CRNKL1	100	97.962	Carlito_syrichta
ENSVVUG00000012559	CRNKL1	79	95.961	ENSCAPG00000010501	CRNKL1	99	95.961	Cavia_aperea
ENSVVUG00000012559	CRNKL1	82	96.215	ENSCPOG00000004418	CRNKL1	99	96.176	Cavia_porcellus
ENSVVUG00000012559	CRNKL1	82	96.943	ENSCCAG00000027037	CRNKL1	100	96.943	Cebus_capucinus
ENSVVUG00000012559	CRNKL1	95	86.392	ENSCATG00000034247	CRNKL1	100	97.089	Cercocebus_atys
ENSVVUG00000012559	CRNKL1	82	96.943	ENSCLAG00000013859	CRNKL1	100	96.943	Chinchilla_lanigera
ENSVVUG00000012559	CRNKL1	82	97.089	ENSCSAG00000011434	CRNKL1	100	97.089	Chlorocebus_sabaeus
ENSVVUG00000012559	CRNKL1	83	98.268	ENSCHOG00000006371	CRNKL1	85	98.268	Choloepus_hoffmanni
ENSVVUG00000012559	CRNKL1	82	93.869	ENSCPBG00000023501	CRNKL1	99	93.824	Chrysemys_picta_bellii
ENSVVUG00000012559	CRNKL1	79	69.637	ENSCING00000002709	-	98	68.452	Ciona_intestinalis
ENSVVUG00000012559	CRNKL1	82	97.234	ENSCANG00000038789	CRNKL1	100	97.234	Colobus_angolensis_palliatus
ENSVVUG00000012559	CRNKL1	82	97.817	ENSCGRG00001001115	-	99	97.817	Cricetulus_griseus_chok1gshd
ENSVVUG00000012559	CRNKL1	82	97.817	ENSCGRG00001000687	-	99	97.817	Cricetulus_griseus_chok1gshd
ENSVVUG00000012559	CRNKL1	82	97.817	ENSCGRG00000007854	Crnkl1	99	97.817	Cricetulus_griseus_crigri
ENSVVUG00000012559	CRNKL1	81	86.370	ENSCSEG00000005594	crnkl1	85	86.269	Cynoglossus_semilaevis
ENSVVUG00000012559	CRNKL1	80	87.688	ENSCVAG00000015172	crnkl1	90	86.567	Cyprinodon_variegatus
ENSVVUG00000012559	CRNKL1	79	87.160	ENSDARG00000007901	crnkl1	90	85.714	Danio_rerio
ENSVVUG00000012559	CRNKL1	82	98.977	ENSDNOG00000016226	CRNKL1	95	98.977	Dasypus_novemcinctus
ENSVVUG00000012559	CRNKL1	80	87.910	ENSDORG00000030174	-	98	88.084	Dipodomys_ordii
ENSVVUG00000012559	CRNKL1	82	96.392	ENSDORG00000000394	-	100	96.392	Dipodomys_ordii
ENSVVUG00000012559	CRNKL1	80	88.358	ENSDORG00000023724	-	98	88.839	Dipodomys_ordii
ENSVVUG00000012559	CRNKL1	79	69.520	FBgn0000377	crn	95	69.520	Drosophila_melanogaster
ENSVVUG00000012559	CRNKL1	83	84.848	ENSETEG00000003711	CRNKL1	83	85.147	Echinops_telfairi
ENSVVUG00000012559	CRNKL1	82	61.111	ENSEBUG00000013461	crnkl1	96	58.590	Eptatretus_burgeri
ENSVVUG00000012559	CRNKL1	82	99.418	ENSEASG00005002072	CRNKL1	100	99.418	Equus_asinus_asinus
ENSVVUG00000012559	CRNKL1	82	99.418	ENSECAG00000022215	CRNKL1	100	99.418	Equus_caballus
ENSVVUG00000012559	CRNKL1	90	89.934	ENSEEUG00000000413	CRNKL1	99	88.874	Erinaceus_europaeus
ENSVVUG00000012559	CRNKL1	80	86.377	ENSELUG00000015424	crnkl1	96	84.831	Esox_lucius
ENSVVUG00000012559	CRNKL1	82	99.709	ENSFCAG00000000714	CRNKL1	100	99.709	Felis_catus
ENSVVUG00000012559	CRNKL1	80	91.815	ENSFALG00000004611	CRNKL1	100	91.815	Ficedula_albicollis
ENSVVUG00000012559	CRNKL1	82	97.222	ENSFDAG00000000604	CRNKL1	100	97.089	Fukomys_damarensis
ENSVVUG00000012559	CRNKL1	81	86.776	ENSFHEG00000013163	crnkl1	87	86.677	Fundulus_heteroclitus
ENSVVUG00000012559	CRNKL1	80	86.228	ENSGMOG00000007609	crnkl1	95	83.936	Gadus_morhua
ENSVVUG00000012559	CRNKL1	82	93.723	ENSGALG00000008429	CRNKL1	99	93.676	Gallus_gallus
ENSVVUG00000012559	CRNKL1	80	87.237	ENSGAFG00000014249	crnkl1	88	86.119	Gambusia_affinis
ENSVVUG00000012559	CRNKL1	82	85.088	ENSGACG00000011852	crnkl1	88	86.707	Gasterosteus_aculeatus
ENSVVUG00000012559	CRNKL1	79	92.530	ENSGAGG00000021233	CRNKL1	100	92.730	Gopherus_agassizii
ENSVVUG00000012559	CRNKL1	95	87.237	ENSGGOG00000014176	CRNKL1	100	96.798	Gorilla_gorilla
ENSVVUG00000012559	CRNKL1	81	87.592	ENSHBUG00000005246	crnkl1	89	87.500	Haplochromis_burtoni
ENSVVUG00000012559	CRNKL1	82	96.943	ENSHGLG00000010856	CRNKL1	100	96.943	Heterocephalus_glaber_female
ENSVVUG00000012559	CRNKL1	82	96.943	ENSHGLG00100011521	CRNKL1	100	96.943	Heterocephalus_glaber_male
ENSVVUG00000012559	CRNKL1	80	84.708	ENSHCOG00000006420	crnkl1	97	83.161	Hippocampus_comes
ENSVVUG00000012559	CRNKL1	80	76.241	ENSIPUG00000006836	-	98	75.635	Ictalurus_punctatus
ENSVVUG00000012559	CRNKL1	76	68.917	ENSIPUG00000000315	-	99	70.270	Ictalurus_punctatus
ENSVVUG00000012559	CRNKL1	78	87.827	ENSIPUG00000006751	crnkl1	93	86.119	Ictalurus_punctatus
ENSVVUG00000012559	CRNKL1	82	98.253	ENSSTOG00000014747	CRNKL1	100	98.253	Ictidomys_tridecemlineatus
ENSVVUG00000012559	CRNKL1	82	96.017	ENSJJAG00000016926	Crnkl1	100	96.017	Jaculus_jaculus
ENSVVUG00000012559	CRNKL1	82	86.657	ENSKMAG00000003620	crnkl1	86	86.558	Kryptolebias_marmoratus
ENSVVUG00000012559	CRNKL1	80	71.280	ENSLBEG00000003543	crnkl1	91	71.134	Labrus_bergylta
ENSVVUG00000012559	CRNKL1	82	87.994	ENSLACG00000001129	CRNKL1	99	87.906	Latimeria_chalumnae
ENSVVUG00000012559	CRNKL1	80	89.458	ENSLOCG00000016889	crnkl1	94	87.923	Lepisosteus_oculatus
ENSVVUG00000012559	CRNKL1	82	98.692	ENSLAFG00000004512	CRNKL1	100	98.692	Loxodonta_africana
ENSVVUG00000012559	CRNKL1	95	86.087	ENSMFAG00000039893	CRNKL1	100	97.089	Macaca_fascicularis
ENSVVUG00000012559	CRNKL1	95	86.301	ENSMMUG00000007709	CRNKL1	100	97.089	Macaca_mulatta
ENSVVUG00000012559	CRNKL1	95	86.211	ENSMNEG00000037490	CRNKL1	100	97.089	Macaca_nemestrina
ENSVVUG00000012559	CRNKL1	95	86.284	ENSMLEG00000034885	CRNKL1	100	97.089	Mandrillus_leucophaeus
ENSVVUG00000012559	CRNKL1	82	86.277	ENSMAMG00000008757	crnkl1	90	86.176	Mastacembelus_armatus
ENSVVUG00000012559	CRNKL1	81	87.740	ENSMZEG00005022345	crnkl1	89	87.649	Maylandia_zebra
ENSVVUG00000012559	CRNKL1	82	93.003	ENSMGAG00000003452	CRNKL1	93	92.952	Meleagris_gallopavo
ENSVVUG00000012559	CRNKL1	82	97.671	ENSMAUG00000020764	Crnkl1	99	97.671	Mesocricetus_auratus
ENSVVUG00000012559	CRNKL1	82	98.399	ENSMICG00000006048	CRNKL1	100	98.399	Microcebus_murinus
ENSVVUG00000012559	CRNKL1	80	69.369	ENSMOCG00000004179	-	95	69.715	Microtus_ochrogaster
ENSVVUG00000012559	CRNKL1	82	89.700	ENSMOCG00000000681	-	99	89.700	Microtus_ochrogaster
ENSVVUG00000012559	CRNKL1	76	86.212	ENSMMOG00000017601	crnkl1	96	86.102	Mola_mola
ENSVVUG00000012559	CRNKL1	83	92.308	ENSMODG00000005961	-	98	92.743	Monodelphis_domestica
ENSVVUG00000012559	CRNKL1	82	86.754	ENSMODG00000010857	-	98	87.187	Monodelphis_domestica
ENSVVUG00000012559	CRNKL1	81	63.947	ENSMALG00000011211	crnkl1	87	69.208	Monopterus_albus
ENSVVUG00000012559	CRNKL1	82	98.253	MGP_CAROLIEiJ_G0024394	Crnkl1	99	98.253	Mus_caroli
ENSVVUG00000012559	CRNKL1	82	98.399	ENSMUSG00000001767	Crnkl1	99	98.399	Mus_musculus
ENSVVUG00000012559	CRNKL1	82	96.361	MGP_PahariEiJ_G0025838	Crnkl1	99	96.361	Mus_pahari
ENSVVUG00000012559	CRNKL1	82	98.253	MGP_SPRETEiJ_G0025312	Crnkl1	99	98.253	Mus_spretus
ENSVVUG00000012559	CRNKL1	82	99.563	ENSMPUG00000001226	CRNKL1	100	99.563	Mustela_putorius_furo
ENSVVUG00000012559	CRNKL1	85	97.025	ENSMLUG00000016513	CRNKL1	91	97.025	Myotis_lucifugus
ENSVVUG00000012559	CRNKL1	82	95.857	ENSNGAG00000023097	Crnkl1	100	95.857	Nannospalax_galili
ENSVVUG00000012559	CRNKL1	81	87.888	ENSNBRG00000007867	crnkl1	89	87.798	Neolamprologus_brichardi
ENSVVUG00000012559	CRNKL1	82	93.450	ENSNLEG00000009862	CRNKL1	99	93.382	Nomascus_leucogenys
ENSVVUG00000012559	CRNKL1	80	95.821	ENSMEUG00000012167	-	100	95.821	Notamacropus_eugenii
ENSVVUG00000012559	CRNKL1	82	86.047	ENSMEUG00000002361	-	99	86.050	Notamacropus_eugenii
ENSVVUG00000012559	CRNKL1	71	67.375	ENSOPRG00000009242	-	61	67.375	Ochotona_princeps
ENSVVUG00000012559	CRNKL1	82	96.798	ENSODEG00000012175	CRNKL1	100	96.798	Octodon_degus
ENSVVUG00000012559	CRNKL1	81	88.183	ENSONIG00000018728	crnkl1	89	88.095	Oreochromis_niloticus
ENSVVUG00000012559	CRNKL1	83	97.832	ENSOCUG00000015484	CRNKL1	83	97.832	Oryctolagus_cuniculus
ENSVVUG00000012559	CRNKL1	80	86.036	ENSORLG00000017240	crnkl1	93	82.186	Oryzias_latipes
ENSVVUG00000012559	CRNKL1	80	86.186	ENSORLG00020001742	crnkl1	89	86.082	Oryzias_latipes_hni
ENSVVUG00000012559	CRNKL1	80	86.186	ENSORLG00015019564	crnkl1	88	86.082	Oryzias_latipes_hsok
ENSVVUG00000012559	CRNKL1	82	85.109	ENSOMEG00000019895	crnkl1	91	85.000	Oryzias_melastigma
ENSVVUG00000012559	CRNKL1	82	97.671	ENSOGAG00000011544	CRNKL1	100	97.671	Otolemur_garnettii
ENSVVUG00000012559	CRNKL1	94	88.761	ENSOARG00000002150	CRNKL1	99	88.761	Ovis_aries
ENSVVUG00000012559	CRNKL1	94	85.893	ENSPPAG00000027847	CRNKL1	96	85.857	Pan_paniscus
ENSVVUG00000012559	CRNKL1	82	99.709	ENSPPRG00000001955	CRNKL1	100	99.709	Panthera_pardus
ENSVVUG00000012559	CRNKL1	97	88.235	ENSPTIG00000007393	CRNKL1	100	99.709	Panthera_tigris_altaica
ENSVVUG00000012559	CRNKL1	82	96.652	ENSPTRG00000030609	CRNKL1	100	96.652	Pan_troglodytes
ENSVVUG00000012559	CRNKL1	95	84.355	ENSPANG00000017420	CRNKL1	100	97.089	Papio_anubis
ENSVVUG00000012559	CRNKL1	79	83.008	ENSPKIG00000017093	crnkl1	88	82.127	Paramormyrops_kingsleyae
ENSVVUG00000012559	CRNKL1	82	92.679	ENSPSIG00000012705	CRNKL1	99	92.941	Pelodiscus_sinensis
ENSVVUG00000012559	CRNKL1	81	79.912	ENSPMGG00000006263	crnkl1	95	79.525	Periophthalmus_magnuspinnatus
ENSVVUG00000012559	CRNKL1	82	97.817	ENSPEMG00000000073	-	99	97.817	Peromyscus_maniculatus_bairdii
ENSVVUG00000012559	CRNKL1	82	82.438	ENSPMAG00000002250	crnkl1	99	82.310	Petromyzon_marinus
ENSVVUG00000012559	CRNKL1	86	92.458	ENSPCIG00000025825	CRNKL1	98	92.458	Phascolarctos_cinereus
ENSVVUG00000012559	CRNKL1	80	87.087	ENSPFOG00000005102	crnkl1	92	85.066	Poecilia_formosa
ENSVVUG00000012559	CRNKL1	80	87.087	ENSPLAG00000007288	crnkl1	89	84.942	Poecilia_latipinna
ENSVVUG00000012559	CRNKL1	80	87.237	ENSPMEG00000008865	crnkl1	93	85.212	Poecilia_mexicana
ENSVVUG00000012559	CRNKL1	78	89.247	ENSPREG00000012615	crnkl1	91	84.831	Poecilia_reticulata
ENSVVUG00000012559	CRNKL1	95	87.345	ENSPPYG00000010747	CRNKL1	94	87.656	Pongo_abelii
ENSVVUG00000012559	CRNKL1	82	92.941	ENSPCAG00000003296	CRNKL1	99	82.324	Procavia_capensis
ENSVVUG00000012559	CRNKL1	98	85.384	ENSPCOG00000017608	CRNKL1	97	85.384	Propithecus_coquereli
ENSVVUG00000012559	CRNKL1	98	87.288	ENSPVAG00000006207	CRNKL1	97	87.288	Pteropus_vampyrus
ENSVVUG00000012559	CRNKL1	81	87.592	ENSPNYG00000001977	crnkl1	89	87.500	Pundamilia_nyererei
ENSVVUG00000012559	CRNKL1	80	88.657	ENSPNAG00000001507	crnkl1	96	84.467	Pygocentrus_nattereri
ENSVVUG00000012559	CRNKL1	82	98.399	ENSRNOG00000010587	Crnkl1	99	98.399	Rattus_norvegicus
ENSVVUG00000012559	CRNKL1	82	98.108	ENSRNOG00000040045	Crnkl1	99	98.108	Rattus_norvegicus
ENSVVUG00000012559	CRNKL1	82	96.943	ENSRBIG00000031770	CRNKL1	100	96.943	Rhinopithecus_bieti
ENSVVUG00000012559	CRNKL1	82	96.798	ENSRROG00000040450	CRNKL1	100	96.798	Rhinopithecus_roxellana
ENSVVUG00000012559	CRNKL1	78	37.826	YLR117C	CLF1	99	37.771	Saccharomyces_cerevisiae
ENSVVUG00000012559	CRNKL1	98	85.539	ENSSBOG00000029672	CRNKL1	100	97.234	Saimiri_boliviensis_boliviensis
ENSVVUG00000012559	CRNKL1	79	74.659	ENSSHAG00000011199	CRNKL1	99	74.659	Sarcophilus_harrisii
ENSVVUG00000012559	CRNKL1	79	87.915	ENSSFOG00015000946	crnkl1	88	86.156	Scleropages_formosus
ENSVVUG00000012559	CRNKL1	80	86.846	ENSSMAG00000007933	crnkl1	86	86.747	Scophthalmus_maximus
ENSVVUG00000012559	CRNKL1	81	80.412	ENSSDUG00000012625	crnkl1	86	80.267	Seriola_dumerili
ENSVVUG00000012559	CRNKL1	81	87.168	ENSSLDG00000021413	crnkl1	87	87.073	Seriola_lalandi_dorsalis
ENSVVUG00000012559	CRNKL1	96	87.422	ENSSARG00000006443	CRNKL1	95	86.800	Sorex_araneus
ENSVVUG00000012559	CRNKL1	82	93.265	ENSSPUG00000005254	CRNKL1	99	93.215	Sphenodon_punctatus
ENSVVUG00000012559	CRNKL1	82	86.277	ENSSPAG00000016150	crnkl1	85	88.048	Stegastes_partitus
ENSVVUG00000012559	CRNKL1	82	99.418	ENSSSCG00000038587	CRNKL1	99	99.418	Sus_scrofa
ENSVVUG00000012559	CRNKL1	82	92.420	ENSTGUG00000007645	CRNKL1	99	89.787	Taeniopygia_guttata
ENSVVUG00000012559	CRNKL1	80	81.045	ENSTRUG00000015417	crnkl1	89	80.267	Takifugu_rubripes
ENSVVUG00000012559	CRNKL1	80	85.607	ENSTNIG00000010710	crnkl1	99	84.141	Tetraodon_nigroviridis
ENSVVUG00000012559	CRNKL1	90	85.450	ENSTBEG00000001304	CRNKL1	94	85.450	Tupaia_belangeri
ENSVVUG00000012559	CRNKL1	92	82.262	ENSTTRG00000000484	CRNKL1	98	81.258	Tursiops_truncatus
ENSVVUG00000012559	CRNKL1	82	99.709	ENSUAMG00000018586	CRNKL1	100	99.709	Ursus_americanus
ENSVVUG00000012559	CRNKL1	82	99.709	ENSUMAG00000024957	CRNKL1	100	99.709	Ursus_maritimus
ENSVVUG00000012559	CRNKL1	82	90.830	ENSXETG00000009698	crnkl1	99	90.762	Xenopus_tropicalis
ENSVVUG00000012559	CRNKL1	80	86.357	ENSXCOG00000000824	crnkl1	91	84.513	Xiphophorus_couchianus
ENSVVUG00000012559	CRNKL1	80	87.237	ENSXMAG00000006896	crnkl1	91	85.377	Xiphophorus_maculatus