EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000012789 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 53
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 5526 bases
Position: chrNBDQ01000025.1:12830354-12835879
Accession: 112919074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000017361	KH_1	PF00013.29	1.7e-11	1	1
ENSVVUP00000017361	DEAD	PF00270.29	3.8e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000022866	-	1854	XM_025997409	ENSVVUP00000017361	617 (aa)	XP_025853194	-

Gene Model

Click here to download ENSVVUG00000012789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000012789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000012789	-	59	44.652	ENSVVUG00000022762	DDX17	87	44.652
ENSVVUG00000012789	-	58	34.722	ENSVVUG00000017984	EIF4A3	86	34.722
ENSVVUG00000012789	-	55	35.143	ENSVVUG00000020366	DDX50	58	35.143
ENSVVUG00000012789	-	62	37.280	ENSVVUG00000026020	DDX41	60	37.280
ENSVVUG00000012789	-	64	30.288	ENSVVUG00000027506	DDX55	79	30.048
ENSVVUG00000012789	-	65	40.503	ENSVVUG00000019648	DDX23	52	40.503
ENSVVUG00000012789	-	80	41.633	ENSVVUG00000006263	DDX5	80	41.633
ENSVVUG00000012789	-	59	34.605	ENSVVUG00000013242	EIF4A2	88	34.862
ENSVVUG00000012789	-	65	38.835	ENSVVUG00000021369	DDX4	59	38.835
ENSVVUG00000012789	-	63	35.910	ENSVVUG00000001095	DDX59	62	35.910
ENSVVUG00000012789	-	64	35.980	ENSVVUG00000022331	DDX27	52	35.980
ENSVVUG00000012789	-	64	39.659	ENSVVUG00000030358	DDX3Y	68	40.000
ENSVVUG00000012789	-	58	32.964	ENSVVUG00000024121	DDX6	73	32.964
ENSVVUG00000012789	-	57	35.376	ENSVVUG00000007767	DDX49	70	35.376
ENSVVUG00000012789	-	95	73.424	ENSVVUG00000013908	-	91	73.083
ENSVVUG00000012789	-	67	34.107	ENSVVUG00000020209	DDX52	84	33.850
ENSVVUG00000012789	-	60	30.400	ENSVVUG00000019518	DDX39B	85	30.400
ENSVVUG00000012789	-	59	30.585	ENSVVUG00000020142	DDX25	78	30.709
ENSVVUG00000012789	-	62	34.805	ENSVVUG00000004697	DDX47	78	34.805
ENSVVUG00000012789	-	61	40.816	ENSVVUG00000011589	DDX3X	60	40.594
ENSVVUG00000012789	-	63	33.726	ENSVVUG00000010212	DDX54	51	32.762
ENSVVUG00000012789	-	55	31.373	ENSVVUG00000018012	-	66	31.373

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000012789	-	97	83.445	ENSAMEG00000019953	-	98	83.195	Ailuropoda_melanoleuca
ENSVVUG00000012789	-	96	74.329	ENSBTAG00000046635	-	96	74.329	Bos_taurus
ENSVVUG00000012789	-	66	88.235	ENSCAFG00020005312	-	88	88.235	Canis_lupus_dingo
ENSVVUG00000012789	-	96	74.450	ENSCHIG00000020582	-	95	76.199	Capra_hircus
ENSVVUG00000012789	-	96	70.861	ENSCPOG00000013960	-	91	70.647	Cavia_porcellus
ENSVVUG00000012789	-	95	70.050	ENSCLAG00000017424	-	94	67.402	Chinchilla_lanigera
ENSVVUG00000012789	-	95	76.701	ENSEASG00005001728	-	91	76.701	Equus_asinus_asinus
ENSVVUG00000012789	-	95	76.361	ENSECAG00000035665	-	94	76.361	Equus_caballus
ENSVVUG00000012789	-	95	76.361	ENSECAG00000037015	DDX53	94	76.361	Equus_caballus
ENSVVUG00000012789	-	50	84.848	ENSEEUG00000008838	-	60	84.848	Erinaceus_europaeus
ENSVVUG00000012789	-	81	70.703	ENSFDAG00000020660	-	99	70.588	Fukomys_damarensis
ENSVVUG00000012789	-	69	66.821	ENSFDAG00000018215	-	93	66.357	Fukomys_damarensis
ENSVVUG00000012789	-	97	75.000	ENSSTOG00000027719	-	79	75.000	Ictidomys_tridecemlineatus
ENSVVUG00000012789	-	99	74.272	ENSLAFG00000011531	-	97	74.272	Loxodonta_africana
ENSVVUG00000012789	-	96	84.538	ENSMPUG00000019441	-	98	84.193	Mustela_putorius_furo
ENSVVUG00000012789	-	94	72.041	ENSMLUG00000022321	-	95	70.462	Myotis_lucifugus
ENSVVUG00000012789	-	94	72.978	ENSMLUG00000022233	-	98	71.285	Myotis_lucifugus
ENSVVUG00000012789	-	95	74.660	ENSOCUG00000004437	-	94	73.300	Oryctolagus_cuniculus
ENSVVUG00000012789	-	96	71.765	ENSOGAG00000026282	-	95	70.882	Otolemur_garnettii
ENSVVUG00000012789	-	92	78.169	ENSOARG00000016525	-	95	77.015	Ovis_aries
ENSVVUG00000012789	-	96	81.864	ENSPPRG00000011327	-	93	80.929	Panthera_pardus
ENSVVUG00000012789	-	96	81.695	ENSPTIG00000001243	-	93	80.763	Panthera_tigris_altaica
ENSVVUG00000012789	-	95	76.701	ENSPVAG00000001484	-	95	75.788	Pteropus_vampyrus
ENSVVUG00000012789	-	97	78.130	ENSSSCG00000012169	-	96	77.944	Sus_scrofa
ENSVVUG00000012789	-	54	52.553	ENSTBEG00000001513	-	86	52.553	Tupaia_belangeri
ENSVVUG00000012789	-	97	73.957	ENSTBEG00000014650	-	95	73.134	Tupaia_belangeri
ENSVVUG00000012789	-	97	67.875	ENSTTRG00000016514	-	96	67.875	Tursiops_truncatus
ENSVVUG00000012789	-	97	85.452	ENSUAMG00000000177	-	94	85.191	Ursus_americanus
ENSVVUG00000012789	-	60	89.730	ENSUMAG00000011448	-	84	89.730	Ursus_maritimus
ENSVVUG00000012789	-	99	75.689	ENSVPAG00000007860	-	97	75.203	Vicugna_pacos