EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000013248 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 2718 bases
Position: chrNBDQ01000012.1:3543454-3546171
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000017992	LSM	PF01423.22	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000023733	-	276	-	ENSVVUP00000017992	91 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000013248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000013248's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000013248	-	92	32.143	ENSVVUG00000020191	LSM1	58	32.143
ENSVVUG00000013248	-	77	68.571	ENSVVUG00000003670	-	87	68.571

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000013248	-	82	97.333	ENSG00000128534	LSM8	100	97.333	Homo_sapiens
ENSVVUG00000013248	-	82	94.667	ENSAPOG00000008649	lsm8	78	94.667	Acanthochromis_polyacanthus
ENSVVUG00000013248	-	82	97.333	ENSAMEG00000001162	LSM8	78	97.333	Ailuropoda_melanoleuca
ENSVVUG00000013248	-	82	94.667	ENSACIG00000014694	lsm8	100	94.667	Amphilophus_citrinellus
ENSVVUG00000013248	-	82	94.667	ENSAOCG00000013926	lsm8	78	94.667	Amphiprion_ocellaris
ENSVVUG00000013248	-	82	94.667	ENSAPEG00000023502	lsm8	78	94.667	Amphiprion_percula
ENSVVUG00000013248	-	82	94.667	ENSATEG00000023432	lsm8	100	94.667	Anabas_testudineus
ENSVVUG00000013248	-	82	96.000	ENSAPLG00000005115	LSM8	76	96.000	Anas_platyrhynchos
ENSVVUG00000013248	-	82	97.333	ENSANAG00000027771	LSM8	100	94.595	Aotus_nancymaae
ENSVVUG00000013248	-	82	94.667	ENSACLG00000011253	lsm8	78	94.667	Astatotilapia_calliptera
ENSVVUG00000013248	-	82	96.000	ENSAMXG00000042902	lsm8	78	96.000	Astyanax_mexicanus
ENSVVUG00000013248	-	82	97.333	ENSBTAG00000012649	LSM8	78	97.333	Bos_taurus
ENSVVUG00000013248	-	80	57.534	WBGene00003082	lsm-8	74	57.534	Caenorhabditis_elegans
ENSVVUG00000013248	-	82	97.333	ENSCJAG00000046406	LSM8	100	94.595	Callithrix_jacchus
ENSVVUG00000013248	-	81	97.297	ENSCAFG00000016459	LSM8	75	97.297	Canis_familiaris
ENSVVUG00000013248	-	82	97.333	ENSCAFG00020007643	-	78	97.333	Canis_lupus_dingo
ENSVVUG00000013248	-	82	84.000	ENSCAFG00020012800	-	59	84.000	Canis_lupus_dingo
ENSVVUG00000013248	-	82	97.333	ENSCHIG00000014201	LSM8	80	97.333	Capra_hircus
ENSVVUG00000013248	-	82	97.333	ENSTSYG00000032434	LSM8	78	97.333	Carlito_syrichta
ENSVVUG00000013248	-	81	95.946	ENSCAPG00000008253	LSM8	100	95.946	Cavia_aperea
ENSVVUG00000013248	-	82	97.333	ENSCPOG00000035673	LSM8	78	97.333	Cavia_porcellus
ENSVVUG00000013248	-	82	97.333	ENSCCAG00000021329	LSM8	100	94.595	Cebus_capucinus
ENSVVUG00000013248	-	82	97.333	ENSCATG00000045302	LSM8	100	94.595	Cercocebus_atys
ENSVVUG00000013248	-	82	97.333	ENSCLAG00000003726	LSM8	78	97.333	Chinchilla_lanigera
ENSVVUG00000013248	-	82	94.667	ENSCSAG00000019007	-	78	94.667	Chlorocebus_sabaeus
ENSVVUG00000013248	-	82	97.333	ENSCSAG00000010802	-	78	97.333	Chlorocebus_sabaeus
ENSVVUG00000013248	-	82	97.333	ENSCPBG00000008154	LSM8	77	97.333	Chrysemys_picta_bellii
ENSVVUG00000013248	-	82	80.000	ENSCING00000024877	-	78	80.000	Ciona_intestinalis
ENSVVUG00000013248	-	82	97.333	ENSCANG00000040728	LSM8	100	94.595	Colobus_angolensis_palliatus
ENSVVUG00000013248	-	82	97.333	ENSCGRG00001000450	Lsm8	78	97.333	Cricetulus_griseus_chok1gshd
ENSVVUG00000013248	-	82	97.333	ENSCGRG00000005587	Lsm8	88	97.333	Cricetulus_griseus_crigri
ENSVVUG00000013248	-	85	89.873	ENSCSEG00000004164	lsm8	87	89.873	Cynoglossus_semilaevis
ENSVVUG00000013248	-	82	93.333	ENSCVAG00000020547	lsm8	78	93.333	Cyprinodon_variegatus
ENSVVUG00000013248	-	82	94.667	ENSDARG00000091656	lsm8	78	94.667	Danio_rerio
ENSVVUG00000013248	-	82	97.333	ENSDNOG00000034613	LSM8	78	97.333	Dasypus_novemcinctus
ENSVVUG00000013248	-	82	97.333	ENSDORG00000027868	Lsm8	78	97.333	Dipodomys_ordii
ENSVVUG00000013248	-	80	71.233	FBgn0035271	CG2021	77	71.233	Drosophila_melanogaster
ENSVVUG00000013248	-	82	96.000	ENSETEG00000011594	LSM8	78	96.000	Echinops_telfairi
ENSVVUG00000013248	-	81	89.189	ENSEBUG00000012017	lsm8	100	89.189	Eptatretus_burgeri
ENSVVUG00000013248	-	82	97.333	ENSECAG00000024025	LSM8	71	97.222	Equus_caballus
ENSVVUG00000013248	-	82	92.000	ENSELUG00000010138	lsm8	78	92.000	Esox_lucius
ENSVVUG00000013248	-	82	97.333	ENSFCAG00000036620	-	78	97.333	Felis_catus
ENSVVUG00000013248	-	74	71.642	ENSFCAG00000044794	-	66	71.642	Felis_catus
ENSVVUG00000013248	-	82	96.000	ENSFALG00000010023	LSM8	78	96.000	Ficedula_albicollis
ENSVVUG00000013248	-	82	97.333	ENSFDAG00000019530	LSM8	78	97.333	Fukomys_damarensis
ENSVVUG00000013248	-	82	94.667	ENSFHEG00000013729	lsm8	78	94.667	Fundulus_heteroclitus
ENSVVUG00000013248	-	82	96.000	ENSGALG00000009110	LSM8	78	96.000	Gallus_gallus
ENSVVUG00000013248	-	82	93.333	ENSGAFG00000001135	lsm8	78	93.333	Gambusia_affinis
ENSVVUG00000013248	-	82	97.333	ENSGAGG00000017366	LSM8	78	97.333	Gopherus_agassizii
ENSVVUG00000013248	-	82	97.333	ENSGGOG00000041883	LSM8	78	97.333	Gorilla_gorilla
ENSVVUG00000013248	-	82	94.667	ENSHBUG00000003646	lsm8	78	94.667	Haplochromis_burtoni
ENSVVUG00000013248	-	52	97.872	ENSHGLG00000001988	-	68	97.872	Heterocephalus_glaber_female
ENSVVUG00000013248	-	82	90.667	ENSHGLG00000019782	-	78	90.667	Heterocephalus_glaber_female
ENSVVUG00000013248	-	81	93.243	ENSHGLG00100003934	-	74	93.243	Heterocephalus_glaber_male
ENSVVUG00000013248	-	82	92.000	ENSHGLG00100012166	-	78	92.000	Heterocephalus_glaber_male
ENSVVUG00000013248	-	82	93.333	ENSHCOG00000005037	lsm8	78	93.333	Hippocampus_comes
ENSVVUG00000013248	-	82	96.000	ENSIPUG00000019811	NAA38	78	96.000	Ictalurus_punctatus
ENSVVUG00000013248	-	82	97.333	ENSSTOG00000009039	LSM8	78	97.333	Ictidomys_tridecemlineatus
ENSVVUG00000013248	-	82	84.000	ENSSTOG00000034801	-	69	84.000	Ictidomys_tridecemlineatus
ENSVVUG00000013248	-	82	97.333	ENSJJAG00000009031	Lsm8	77	97.333	Jaculus_jaculus
ENSVVUG00000013248	-	82	94.667	ENSKMAG00000018983	lsm8	78	94.667	Kryptolebias_marmoratus
ENSVVUG00000013248	-	82	93.333	ENSLACG00000010231	LSM8	78	93.333	Latimeria_chalumnae
ENSVVUG00000013248	-	82	94.667	ENSLOCG00000015580	lsm8	78	94.667	Lepisosteus_oculatus
ENSVVUG00000013248	-	82	97.333	ENSLAFG00000011242	LSM8	77	97.333	Loxodonta_africana
ENSVVUG00000013248	-	82	93.333	ENSMFAG00000013044	-	78	93.333	Macaca_fascicularis
ENSVVUG00000013248	-	82	97.333	ENSMFAG00000035798	LSM8	100	94.595	Macaca_fascicularis
ENSVVUG00000013248	-	82	97.333	ENSMMUG00000046401	LSM8	100	94.595	Macaca_mulatta
ENSVVUG00000013248	-	82	97.333	ENSMNEG00000036764	-	100	94.595	Macaca_nemestrina
ENSVVUG00000013248	-	82	93.333	ENSMNEG00000011141	-	100	93.333	Macaca_nemestrina
ENSVVUG00000013248	-	82	97.333	ENSMLEG00000035828	-	100	94.595	Mandrillus_leucophaeus
ENSVVUG00000013248	-	82	80.000	ENSMLEG00000039324	-	76	80.000	Mandrillus_leucophaeus
ENSVVUG00000013248	-	82	94.667	ENSMAMG00000018839	lsm8	100	94.667	Mastacembelus_armatus
ENSVVUG00000013248	-	82	94.667	ENSMZEG00005019138	lsm8	78	94.667	Maylandia_zebra
ENSVVUG00000013248	-	82	96.000	ENSMGAG00000008808	LSM8	78	96.000	Meleagris_gallopavo
ENSVVUG00000013248	-	82	76.000	ENSMAUG00000015356	-	75	76.000	Mesocricetus_auratus
ENSVVUG00000013248	-	99	77.778	ENSMAUG00000020287	-	100	87.838	Mesocricetus_auratus
ENSVVUG00000013248	-	82	89.333	ENSMAUG00000015721	-	78	89.333	Mesocricetus_auratus
ENSVVUG00000013248	-	82	97.333	ENSMICG00000042730	LSM8	78	97.333	Microcebus_murinus
ENSVVUG00000013248	-	82	97.333	ENSMOCG00000001688	Lsm8	78	97.333	Microtus_ochrogaster
ENSVVUG00000013248	-	82	94.667	ENSMMOG00000006046	lsm8	100	94.667	Mola_mola
ENSVVUG00000013248	-	69	98.413	ENSMODG00000015729	LSM8	81	98.413	Monodelphis_domestica
ENSVVUG00000013248	-	82	94.667	ENSMALG00000000405	lsm8	78	94.667	Monopterus_albus
ENSVVUG00000013248	-	82	97.333	MGP_CAROLIEiJ_G0028125	-	99	78.788	Mus_caroli
ENSVVUG00000013248	-	82	97.333	ENSMUSG00000044155	Lsm8	99	78.788	Mus_musculus
ENSVVUG00000013248	-	82	97.333	MGP_PahariEiJ_G0021881	Lsm8	100	97.333	Mus_pahari
ENSVVUG00000013248	-	82	97.333	MGP_SPRETEiJ_G0029125	-	99	78.788	Mus_spretus
ENSVVUG00000013248	-	82	97.333	ENSMLUG00000006837	-	78	97.333	Myotis_lucifugus
ENSVVUG00000013248	-	82	96.000	ENSMLUG00000027762	-	78	96.000	Myotis_lucifugus
ENSVVUG00000013248	-	82	97.333	ENSNGAG00000016554	Lsm8	78	97.333	Nannospalax_galili
ENSVVUG00000013248	-	82	94.667	ENSNBRG00000014441	lsm8	78	94.667	Neolamprologus_brichardi
ENSVVUG00000013248	-	82	97.333	ENSNLEG00000011768	LSM8	78	97.333	Nomascus_leucogenys
ENSVVUG00000013248	-	82	84.000	ENSMEUG00000007801	LSM8	78	84.000	Notamacropus_eugenii
ENSVVUG00000013248	-	82	97.333	ENSOPRG00000014809	LSM8	88	97.333	Ochotona_princeps
ENSVVUG00000013248	-	82	97.333	ENSODEG00000000418	-	78	97.333	Octodon_degus
ENSVVUG00000013248	-	71	84.615	ENSODEG00000020290	-	76	84.615	Octodon_degus
ENSVVUG00000013248	-	82	97.333	ENSOANG00000014536	LSM8	78	97.333	Ornithorhynchus_anatinus
ENSVVUG00000013248	-	82	97.333	ENSOCUG00000017359	LSM8	77	97.333	Oryctolagus_cuniculus
ENSVVUG00000013248	-	99	78.495	ENSORLG00000017432	lsm8	99	78.495	Oryzias_latipes
ENSVVUG00000013248	-	99	78.495	ENSORLG00020004376	lsm8	99	78.495	Oryzias_latipes_hni
ENSVVUG00000013248	-	82	94.667	ENSORLG00015003757	lsm8	78	94.667	Oryzias_latipes_hsok
ENSVVUG00000013248	-	76	94.203	ENSOMEG00000022509	lsm8	84	90.789	Oryzias_melastigma
ENSVVUG00000013248	-	82	97.333	ENSOGAG00000013377	LSM8	78	97.333	Otolemur_garnettii
ENSVVUG00000013248	-	82	97.333	ENSOARG00000017974	LSM8	78	97.333	Ovis_aries
ENSVVUG00000013248	-	82	97.333	ENSPPAG00000043228	-	100	97.333	Pan_paniscus
ENSVVUG00000013248	-	82	97.333	ENSPPRG00000006444	LSM8	78	97.333	Panthera_pardus
ENSVVUG00000013248	-	82	97.333	ENSPTIG00000004722	LSM8	78	97.333	Panthera_tigris_altaica
ENSVVUG00000013248	-	82	97.333	ENSPTRG00000046596	-	100	97.333	Pan_troglodytes
ENSVVUG00000013248	-	82	97.333	ENSPANG00000035470	-	100	94.595	Papio_anubis
ENSVVUG00000013248	-	82	92.000	ENSPANG00000019395	-	78	92.000	Papio_anubis
ENSVVUG00000013248	-	82	94.667	ENSPKIG00000006092	lsm8	76	94.667	Paramormyrops_kingsleyae
ENSVVUG00000013248	-	82	97.333	ENSPSIG00000017054	LSM8	100	97.333	Pelodiscus_sinensis
ENSVVUG00000013248	-	82	94.667	ENSPMGG00000016442	lsm8	100	94.667	Periophthalmus_magnuspinnatus
ENSVVUG00000013248	-	81	94.595	ENSPEMG00000009153	Lsm8	100	94.595	Peromyscus_maniculatus_bairdii
ENSVVUG00000013248	-	79	97.222	ENSPCIG00000021467	LSM8	76	97.222	Phascolarctos_cinereus
ENSVVUG00000013248	-	82	93.333	ENSPFOG00000012340	lsm8	78	93.333	Poecilia_formosa
ENSVVUG00000013248	-	82	93.333	ENSPLAG00000000516	lsm8	78	93.333	Poecilia_latipinna
ENSVVUG00000013248	-	82	93.333	ENSPMEG00000022567	lsm8	78	93.333	Poecilia_mexicana
ENSVVUG00000013248	-	80	82.500	ENSPREG00000005527	lsm8	72	82.500	Poecilia_reticulata
ENSVVUG00000013248	-	82	97.333	ENSPPYG00000017942	LSM8	78	97.333	Pongo_abelii
ENSVVUG00000013248	-	81	74.324	ENSPCOG00000017982	-	74	74.324	Propithecus_coquereli
ENSVVUG00000013248	-	82	97.333	ENSPCOG00000003309	-	78	97.333	Propithecus_coquereli
ENSVVUG00000013248	-	82	96.000	ENSPVAG00000000990	LSM8	88	96.000	Pteropus_vampyrus
ENSVVUG00000013248	-	82	94.667	ENSPNYG00000011448	lsm8	78	94.667	Pundamilia_nyererei
ENSVVUG00000013248	-	82	96.000	ENSPNAG00000010252	lsm8	78	96.000	Pygocentrus_nattereri
ENSVVUG00000013248	-	82	97.333	ENSRNOG00000058677	Lsm8	78	97.333	Rattus_norvegicus
ENSVVUG00000013248	-	82	97.333	ENSRBIG00000032851	LSM8	100	94.595	Rhinopithecus_bieti
ENSVVUG00000013248	-	82	97.333	ENSRROG00000039618	LSM8	100	94.595	Rhinopithecus_roxellana
ENSVVUG00000013248	-	82	97.333	ENSSBOG00000023223	LSM8	100	94.595	Saimiri_boliviensis_boliviensis
ENSVVUG00000013248	-	82	97.333	ENSSHAG00000018435	-	78	97.333	Sarcophilus_harrisii
ENSVVUG00000013248	-	82	93.333	ENSSFOG00015004412	lsm8	78	93.333	Scleropages_formosus
ENSVVUG00000013248	-	82	94.667	ENSSMAG00000009458	lsm8	100	94.667	Scophthalmus_maximus
ENSVVUG00000013248	-	82	94.667	ENSSDUG00000014702	lsm8	78	94.667	Seriola_dumerili
ENSVVUG00000013248	-	82	94.667	ENSSLDG00000016870	lsm8	100	94.667	Seriola_lalandi_dorsalis
ENSVVUG00000013248	-	79	97.222	ENSSARG00000009628	-	100	97.222	Sorex_araneus
ENSVVUG00000013248	-	82	97.333	ENSSPUG00000017419	LSM8	78	97.333	Sphenodon_punctatus
ENSVVUG00000013248	-	82	94.667	ENSSPAG00000021422	lsm8	78	94.667	Stegastes_partitus
ENSVVUG00000013248	-	82	97.333	ENSSSCG00000021652	LSM8	78	97.333	Sus_scrofa
ENSVVUG00000013248	-	82	96.000	ENSTGUG00000004730	-	78	96.000	Taeniopygia_guttata
ENSVVUG00000013248	-	82	96.000	ENSTGUG00000016823	-	78	96.000	Taeniopygia_guttata
ENSVVUG00000013248	-	82	94.667	ENSTRUG00000025192	lsm8	78	94.667	Takifugu_rubripes
ENSVVUG00000013248	-	82	94.667	ENSTNIG00000002864	lsm8	78	94.667	Tetraodon_nigroviridis
ENSVVUG00000013248	-	82	97.333	ENSTTRG00000001023	LSM8	78	97.333	Tursiops_truncatus
ENSVVUG00000013248	-	82	97.333	ENSUAMG00000006943	-	78	97.333	Ursus_americanus
ENSVVUG00000013248	-	82	97.333	ENSUMAG00000003073	LSM8	80	97.333	Ursus_maritimus
ENSVVUG00000013248	-	82	97.333	ENSVPAG00000001530	LSM8	78	97.333	Vicugna_pacos
ENSVVUG00000013248	-	82	94.667	ENSXETG00000021829	lsm8	77	94.667	Xenopus_tropicalis
ENSVVUG00000013248	-	82	92.000	ENSXCOG00000012938	lsm8	79	92.000	Xiphophorus_couchianus
ENSVVUG00000013248	-	82	93.333	ENSXMAG00000025919	lsm8	78	93.333	Xiphophorus_maculatus