EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000013695 (Gene tree)
Gene ID: -
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 34347 bases
Position: chrNBDQ01000164.1:3934974-3969320
Accession: 112935635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000018645	RRM_1	PF00076.22	2e-13	1	1
ENSVVUP00000018634	RRM_1	PF00076.22	2.1e-13	1	1
ENSVVUP00000018645	SAP	PF02037.27	1.8e-10	1	1
ENSVVUP00000018634	SAP	PF02037.27	2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000024543	SAFB2-201	3048	XM_026019433	ENSVVUP00000018634	954 (aa)	XP_025875218	UPI000DF70232
ENSVVUT00000024554	SAFB2-202	2886	-	ENSVVUP00000018645	900 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000013695's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000013695's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000013695	SAFB2	94	71.556	ENSVVUG00000013720	SAFB	87	67.559

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000013695	SAFB2	100	88.691	ENSG00000130254	SAFB2	100	88.691	Homo_sapiens
ENSVVUG00000013695	SAFB2	100	94.462	ENSAMEG00000012146	SAFB2	100	94.462	Ailuropoda_melanoleuca
ENSVVUG00000013695	SAFB2	100	89.110	ENSANAG00000031936	SAFB2	100	89.110	Aotus_nancymaae
ENSVVUG00000013695	SAFB2	100	89.099	ENSBTAG00000001790	SAFB2	99	89.637	Bos_taurus
ENSVVUG00000013695	SAFB2	100	99.686	ENSCAFG00000018814	SAFB2	100	99.686	Canis_familiaris
ENSVVUG00000013695	SAFB2	100	99.686	ENSCAFG00020018939	SAFB2	100	99.686	Canis_lupus_dingo
ENSVVUG00000013695	SAFB2	100	88.155	ENSCHIG00000024547	SAFB2	100	88.155	Capra_hircus
ENSVVUG00000013695	SAFB2	93	67.427	ENSCAPG00000011771	SAFB2	100	68.341	Cavia_aperea
ENSVVUG00000013695	SAFB2	100	78.921	ENSCPOG00000011394	SAFB2	100	79.328	Cavia_porcellus
ENSVVUG00000013695	SAFB2	100	88.272	ENSCCAG00000017348	SAFB2	100	88.377	Cebus_capucinus
ENSVVUG00000013695	SAFB2	100	87.945	ENSCATG00000039497	SAFB2	100	87.945	Cercocebus_atys
ENSVVUG00000013695	SAFB2	100	88.691	ENSCSAG00000009959	SAFB2	100	88.691	Chlorocebus_sabaeus
ENSVVUG00000013695	SAFB2	74	78.420	ENSCHOG00000010684	SAFB2	100	78.561	Choloepus_hoffmanni
ENSVVUG00000013695	SAFB2	100	85.131	ENSCANG00000024675	SAFB2	100	84.656	Colobus_angolensis_palliatus
ENSVVUG00000013695	SAFB2	100	69.408	ENSCGRG00001015833	Safb2	100	69.208	Cricetulus_griseus_chok1gshd
ENSVVUG00000013695	SAFB2	100	69.408	ENSCGRG00000011131	Safb2	100	69.208	Cricetulus_griseus_crigri
ENSVVUG00000013695	SAFB2	95	76.190	ENSDORG00000016199	Safb2	100	76.082	Dipodomys_ordii
ENSVVUG00000013695	SAFB2	86	86.667	ENSEASG00005022952	SAFB2	91	86.223	Equus_asinus_asinus
ENSVVUG00000013695	SAFB2	98	86.980	ENSECAG00000018978	SAFB2	100	87.043	Equus_caballus
ENSVVUG00000013695	SAFB2	100	95.597	ENSFCAG00000011834	SAFB2	100	95.597	Felis_catus
ENSVVUG00000013695	SAFB2	86	90.024	ENSFDAG00000020009	SAFB2	91	81.965	Fukomys_damarensis
ENSVVUG00000013695	SAFB2	100	84.703	ENSGGOG00000015093	SAFB2	100	83.663	Gorilla_gorilla
ENSVVUG00000013695	SAFB2	100	85.421	ENSHGLG00000017442	SAFB2	100	85.524	Heterocephalus_glaber_female
ENSVVUG00000013695	SAFB2	98	84.105	ENSLAFG00000003836	SAFB2	99	83.246	Loxodonta_africana
ENSVVUG00000013695	SAFB2	100	88.796	ENSMFAG00000039706	SAFB2	100	88.796	Macaca_fascicularis
ENSVVUG00000013695	SAFB2	100	89.110	ENSMMUG00000017968	SAFB2	100	89.110	Macaca_mulatta
ENSVVUG00000013695	SAFB2	100	83.003	ENSMNEG00000032042	SAFB2	100	83.003	Macaca_nemestrina
ENSVVUG00000013695	SAFB2	100	89.005	ENSMLEG00000034562	SAFB2	100	89.005	Mandrillus_leucophaeus
ENSVVUG00000013695	SAFB2	81	73.391	ENSMAUG00000011573	Safb2	92	73.835	Mesocricetus_auratus
ENSVVUG00000013695	SAFB2	100	87.657	ENSMICG00000008711	SAFB2	100	87.657	Microcebus_murinus
ENSVVUG00000013695	SAFB2	100	69.215	ENSMOCG00000006827	Safb2	100	69.014	Microtus_ochrogaster
ENSVVUG00000013695	SAFB2	93	78.351	ENSMODG00000001178	SAFB2	100	72.642	Monodelphis_domestica
ENSVVUG00000013695	SAFB2	94	77.885	MGP_CAROLIEiJ_G0021779	Safb2	99	70.110	Mus_caroli
ENSVVUG00000013695	SAFB2	94	76.923	ENSMUSG00000042625	Safb2	99	70.382	Mus_musculus
ENSVVUG00000013695	SAFB2	94	76.923	MGP_PahariEiJ_G0020768	Safb2	100	68.432	Mus_pahari
ENSVVUG00000013695	SAFB2	99	63.197	MGP_SPRETEiJ_G0022690	Safb2	99	63.450	Mus_spretus
ENSVVUG00000013695	SAFB2	100	96.017	ENSMPUG00000006106	SAFB2	93	96.017	Mustela_putorius_furo
ENSVVUG00000013695	SAFB2	100	87.565	ENSMLUG00000001050	SAFB2	100	85.803	Myotis_lucifugus
ENSVVUG00000013695	SAFB2	100	87.435	ENSNLEG00000013514	SAFB2	100	87.435	Nomascus_leucogenys
ENSVVUG00000013695	SAFB2	94	69.687	ENSMEUG00000002456	SAFB2	100	69.239	Notamacropus_eugenii
ENSVVUG00000013695	SAFB2	96	79.144	ENSOPRG00000011523	-	100	74.271	Ochotona_princeps
ENSVVUG00000013695	SAFB2	100	81.347	ENSODEG00000014751	SAFB2	100	81.347	Octodon_degus
ENSVVUG00000013695	SAFB2	100	87.029	ENSOGAG00000006855	SAFB2	100	86.925	Otolemur_garnettii
ENSVVUG00000013695	SAFB2	93	86.066	ENSOARG00000007982	SAFB2	67	89.839	Ovis_aries
ENSVVUG00000013695	SAFB2	100	88.901	ENSPPAG00000043392	SAFB2	100	88.901	Pan_paniscus
ENSVVUG00000013695	SAFB2	100	95.073	ENSPPRG00000011310	SAFB2	100	95.073	Panthera_pardus
ENSVVUG00000013695	SAFB2	88	87.037	ENSPTIG00000015120	SAFB2	66	88.372	Panthera_tigris_altaica
ENSVVUG00000013695	SAFB2	100	83.037	ENSPTRG00000010334	SAFB2	100	82.932	Pan_troglodytes
ENSVVUG00000013695	SAFB2	100	88.901	ENSPANG00000007004	SAFB2	100	88.901	Papio_anubis
ENSVVUG00000013695	SAFB2	100	67.463	ENSPEMG00000016015	Safb2	100	67.264	Peromyscus_maniculatus_bairdii
ENSVVUG00000013695	SAFB2	68	75.980	ENSPCIG00000009518	-	99	79.006	Phascolarctos_cinereus
ENSVVUG00000013695	SAFB2	100	88.796	ENSPPYG00000009427	SAFB2	100	88.796	Pongo_abelii
ENSVVUG00000013695	SAFB2	100	81.250	ENSPCAG00000006352	SAFB2	99	82.821	Procavia_capensis
ENSVVUG00000013695	SAFB2	100	84.486	ENSPCOG00000023260	SAFB2	100	82.950	Propithecus_coquereli
ENSVVUG00000013695	SAFB2	58	91.304	ENSPVAG00000004902	-	74	91.304	Pteropus_vampyrus
ENSVVUG00000013695	SAFB2	76	75.758	ENSRNOG00000049511	AABR07066522.1	100	68.727	Rattus_norvegicus
ENSVVUG00000013695	SAFB2	83	92.845	ENSRBIG00000033446	SAFB2	99	92.845	Rhinopithecus_bieti
ENSVVUG00000013695	SAFB2	100	89.215	ENSRROG00000006606	SAFB2	100	89.215	Rhinopithecus_roxellana
ENSVVUG00000013695	SAFB2	100	87.120	ENSSBOG00000032315	SAFB2	100	87.942	Saimiri_boliviensis_boliviensis
ENSVVUG00000013695	SAFB2	97	73.491	ENSSHAG00000012703	SAFB2	100	71.608	Sarcophilus_harrisii
ENSVVUG00000013695	SAFB2	82	74.528	ENSSARG00000000649	SAFB2	100	76.258	Sorex_araneus
ENSVVUG00000013695	SAFB2	100	93.927	ENSSSCG00000013523	SAFB2	100	93.508	Sus_scrofa
ENSVVUG00000013695	SAFB2	77	78.828	ENSTBEG00000012709	SAFB2	85	78.828	Tupaia_belangeri
ENSVVUG00000013695	SAFB2	94	85.314	ENSTTRG00000013585	SAFB2	93	84.753	Tursiops_truncatus
ENSVVUG00000013695	SAFB2	99	97.476	ENSUAMG00000024695	SAFB2	99	97.476	Ursus_americanus
ENSVVUG00000013695	SAFB2	92	90.361	ENSUMAG00000009585	SAFB2	92	93.528	Ursus_maritimus
ENSVVUG00000013695	SAFB2	74	96.335	ENSVPAG00000012041	SAFB2	90	96.517	Vicugna_pacos