EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000013720 (Gene tree)
Gene ID: -
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 35150 bases
Position: chrNBDQ01000164.1:3969389-4004538
Accession: 112935634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000018667	RRM_5	PF13893.6	6.6e-07	1	1
ENSVVUP00000018667	RRM_1	PF00076.22	5.7e-13	1	1
ENSVVUP00000018667	SAP	PF02037.27	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000024585	SAFB-201	3365	XM_026019430	ENSVVUP00000018667	1056 (aa)	XP_025875215	-

Gene Model

Click here to download ENSVVUG00000013720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000013720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000013720	SAFB	87	67.559	ENSVVUG00000013695	SAFB2	94	71.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000013720	SAFB	87	93.355	ENSG00000160633	SAFB	100	93.355	Homo_sapiens
ENSVVUG00000013720	SAFB	77	45.338	ENSAPOG00000022508	safb	66	44.246	Acanthochromis_polyacanthus
ENSVVUG00000013720	SAFB	87	97.500	ENSAMEG00000012254	SAFB	100	97.500	Ailuropoda_melanoleuca
ENSVVUG00000013720	SAFB	84	39.891	ENSACIG00000006247	safb	73	43.381	Amphilophus_citrinellus
ENSVVUG00000013720	SAFB	80	43.924	ENSAOCG00000006308	safb	71	44.228	Amphiprion_ocellaris
ENSVVUG00000013720	SAFB	77	44.820	ENSAPEG00000023342	safb	66	43.689	Amphiprion_percula
ENSVVUG00000013720	SAFB	83	42.375	ENSATEG00000004998	safb	66	43.230	Anabas_testudineus
ENSVVUG00000013720	SAFB	81	66.359	ENSAPLG00000005780	-	100	64.245	Anas_platyrhynchos
ENSVVUG00000013720	SAFB	78	63.615	ENSAPLG00000006355	-	99	63.766	Anas_platyrhynchos
ENSVVUG00000013720	SAFB	87	93.355	ENSANAG00000028821	SAFB	100	93.355	Aotus_nancymaae
ENSVVUG00000013720	SAFB	77	42.518	ENSACLG00000001926	safb	65	42.484	Astatotilapia_calliptera
ENSVVUG00000013720	SAFB	79	44.767	ENSAMXG00000018154	safb	65	42.599	Astyanax_mexicanus
ENSVVUG00000013720	SAFB	87	91.285	ENSBTAG00000007875	SAFB	100	91.285	Bos_taurus
ENSVVUG00000013720	SAFB	78	96.226	ENSCJAG00000017081	SAFB	100	96.226	Callithrix_jacchus
ENSVVUG00000013720	SAFB	100	99.432	ENSCAFG00000018803	SAFB	100	99.432	Canis_familiaris
ENSVVUG00000013720	SAFB	87	99.564	ENSCAFG00020018943	SAFB	100	99.564	Canis_lupus_dingo
ENSVVUG00000013720	SAFB	87	89.869	ENSCHIG00000007262	SAFB	98	92.925	Capra_hircus
ENSVVUG00000013720	SAFB	51	78.692	ENSTSYG00000001851	-	53	92.222	Carlito_syrichta
ENSVVUG00000013720	SAFB	87	88.004	ENSCPOG00000026322	SAFB	100	87.898	Cavia_porcellus
ENSVVUG00000013720	SAFB	87	93.362	ENSCCAG00000020193	SAFB	100	93.362	Cebus_capucinus
ENSVVUG00000013720	SAFB	87	93.682	ENSCATG00000029994	SAFB	100	93.682	Cercocebus_atys
ENSVVUG00000013720	SAFB	87	88.581	ENSCLAG00000007734	SAFB	100	89.328	Chinchilla_lanigera
ENSVVUG00000013720	SAFB	87	93.682	ENSCSAG00000009949	SAFB	100	93.682	Chlorocebus_sabaeus
ENSVVUG00000013720	SAFB	75	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSVVUG00000013720	SAFB	79	60.791	ENSCPBG00000010936	-	99	61.582	Chrysemys_picta_bellii
ENSVVUG00000013720	SAFB	79	65.325	ENSCPBG00000010928	-	99	63.626	Chrysemys_picta_bellii
ENSVVUG00000013720	SAFB	83	95.025	ENSCANG00000004774	-	100	95.025	Colobus_angolensis_palliatus
ENSVVUG00000013720	SAFB	87	87.364	ENSCANG00000019754	-	100	87.364	Colobus_angolensis_palliatus
ENSVVUG00000013720	SAFB	87	84.239	ENSCGRG00001002254	Safb	100	84.239	Cricetulus_griseus_chok1gshd
ENSVVUG00000013720	SAFB	78	81.443	ENSCGRG00000011529	Safb	96	81.443	Cricetulus_griseus_crigri
ENSVVUG00000013720	SAFB	83	41.516	ENSCSEG00000019870	safb	69	41.234	Cynoglossus_semilaevis
ENSVVUG00000013720	SAFB	81	39.797	ENSCVAG00000002226	safb	65	40.426	Cyprinodon_variegatus
ENSVVUG00000013720	SAFB	78	42.063	ENSDARG00000020467	safb	60	60.000	Danio_rerio
ENSVVUG00000013720	SAFB	100	89.688	ENSDNOG00000015746	SAFB	100	89.688	Dasypus_novemcinctus
ENSVVUG00000013720	SAFB	87	82.803	ENSDORG00000016200	Safb	100	83.051	Dipodomys_ordii
ENSVVUG00000013720	SAFB	69	85.000	ENSETEG00000018679	SAFB	76	86.752	Echinops_telfairi
ENSVVUG00000013720	SAFB	92	89.242	ENSEASG00005023019	SAFB	100	90.033	Equus_asinus_asinus
ENSVVUG00000013720	SAFB	96	88.218	ENSECAG00000018659	SAFB	99	88.315	Equus_caballus
ENSVVUG00000013720	SAFB	85	41.994	ENSELUG00000022327	safb	62	52.147	Esox_lucius
ENSVVUG00000013720	SAFB	87	98.366	ENSFCAG00000011835	SAFB	100	98.366	Felis_catus
ENSVVUG00000013720	SAFB	87	66.129	ENSFALG00000013882	-	89	64.778	Ficedula_albicollis
ENSVVUG00000013720	SAFB	50	60.714	ENSFALG00000013881	-	99	60.879	Ficedula_albicollis
ENSVVUG00000013720	SAFB	83	82.479	ENSFDAG00000020306	SAFB	100	87.771	Fukomys_damarensis
ENSVVUG00000013720	SAFB	51	46.384	ENSGMOG00000014280	safb	65	40.484	Gadus_morhua
ENSVVUG00000013720	SAFB	87	61.427	ENSGALG00000001948	-	97	63.404	Gallus_gallus
ENSVVUG00000013720	SAFB	87	65.770	ENSGALG00000013365	-	97	64.961	Gallus_gallus
ENSVVUG00000013720	SAFB	83	42.122	ENSGACG00000011385	safb	67	42.492	Gasterosteus_aculeatus
ENSVVUG00000013720	SAFB	63	60.534	ENSGAGG00000017702	-	100	57.965	Gopherus_agassizii
ENSVVUG00000013720	SAFB	83	62.500	ENSGAGG00000008424	-	97	64.071	Gopherus_agassizii
ENSVVUG00000013720	SAFB	87	93.137	ENSGGOG00000015109	SAFB	100	93.137	Gorilla_gorilla
ENSVVUG00000013720	SAFB	83	39.353	ENSHBUG00000009218	safb	71	41.573	Haplochromis_burtoni
ENSVVUG00000013720	SAFB	87	90.899	ENSHGLG00000015883	SAFB	100	90.899	Heterocephalus_glaber_female
ENSVVUG00000013720	SAFB	87	75.399	ENSHGLG00100004228	SAFB	77	89.401	Heterocephalus_glaber_male
ENSVVUG00000013720	SAFB	79	37.199	ENSHCOG00000001705	safb	67	37.050	Hippocampus_comes
ENSVVUG00000013720	SAFB	81	91.954	ENSSTOG00000002783	SAFB	100	91.954	Ictidomys_tridecemlineatus
ENSVVUG00000013720	SAFB	87	86.079	ENSJJAG00000009021	Safb	100	85.441	Jaculus_jaculus
ENSVVUG00000013720	SAFB	78	42.757	ENSKMAG00000022308	safb	66	40.422	Kryptolebias_marmoratus
ENSVVUG00000013720	SAFB	83	42.503	ENSLBEG00000006015	safb	65	45.543	Labrus_bergylta
ENSVVUG00000013720	SAFB	55	53.160	ENSLACG00000018090	SAFB	68	52.484	Latimeria_chalumnae
ENSVVUG00000013720	SAFB	84	46.406	ENSLOCG00000003613	safb	76	46.154	Lepisosteus_oculatus
ENSVVUG00000013720	SAFB	86	91.404	ENSLAFG00000003840	SAFB	100	90.207	Loxodonta_africana
ENSVVUG00000013720	SAFB	87	93.580	ENSMFAG00000003885	SAFB	100	93.580	Macaca_fascicularis
ENSVVUG00000013720	SAFB	87	93.682	ENSMMUG00000017970	SAFB	100	93.682	Macaca_mulatta
ENSVVUG00000013720	SAFB	87	90.098	ENSMNEG00000035637	SAFB	100	90.098	Macaca_nemestrina
ENSVVUG00000013720	SAFB	87	87.961	ENSMLEG00000038637	SAFB	100	87.961	Mandrillus_leucophaeus
ENSVVUG00000013720	SAFB	83	41.640	ENSMAMG00000003357	safb	61	42.283	Mastacembelus_armatus
ENSVVUG00000013720	SAFB	83	41.577	ENSMZEG00005009120	safb	67	42.948	Maylandia_zebra
ENSVVUG00000013720	SAFB	84	64.103	ENSMGAG00000001101	-	97	63.510	Meleagris_gallopavo
ENSVVUG00000013720	SAFB	77	60.096	ENSMGAG00000001051	-	97	61.118	Meleagris_gallopavo
ENSVVUG00000013720	SAFB	87	89.880	ENSMICG00000008739	-	100	89.119	Microcebus_murinus
ENSVVUG00000013720	SAFB	74	79.001	ENSMICG00000046795	-	98	92.553	Microcebus_murinus
ENSVVUG00000013720	SAFB	87	84.665	ENSMOCG00000014040	Safb	100	84.665	Microtus_ochrogaster
ENSVVUG00000013720	SAFB	87	75.345	ENSMODG00000001236	SAFB	98	75.791	Monodelphis_domestica
ENSVVUG00000013720	SAFB	81	41.240	ENSMALG00000020330	safb	70	41.732	Monopterus_albus
ENSVVUG00000013720	SAFB	87	84.681	MGP_CAROLIEiJ_G0021780	Safb	100	84.681	Mus_caroli
ENSVVUG00000013720	SAFB	87	84.787	ENSMUSG00000071054	Safb	100	84.787	Mus_musculus
ENSVVUG00000013720	SAFB	87	84.485	MGP_PahariEiJ_G0020769	Safb	100	84.485	Mus_pahari
ENSVVUG00000013720	SAFB	92	97.439	ENSMPUG00000006123	SAFB	100	97.439	Mustela_putorius_furo
ENSVVUG00000013720	SAFB	87	94.336	ENSMLUG00000001081	SAFB	100	94.336	Myotis_lucifugus
ENSVVUG00000013720	SAFB	87	81.953	ENSNGAG00000019882	Safb	100	81.635	Nannospalax_galili
ENSVVUG00000013720	SAFB	83	93.636	ENSNLEG00000013551	SAFB	100	93.636	Nomascus_leucogenys
ENSVVUG00000013720	SAFB	77	83.804	ENSOPRG00000011561	-	100	85.276	Ochotona_princeps
ENSVVUG00000013720	SAFB	87	91.035	ENSODEG00000014838	SAFB	100	91.035	Octodon_degus
ENSVVUG00000013720	SAFB	83	41.939	ENSONIG00000002318	safb	67	43.499	Oreochromis_niloticus
ENSVVUG00000013720	SAFB	79	81.250	ENSOCUG00000014628	SAFB	65	85.261	Oryctolagus_cuniculus
ENSVVUG00000013720	SAFB	77	43.509	ENSORLG00000016989	safb	66	40.968	Oryzias_latipes
ENSVVUG00000013720	SAFB	81	41.339	ENSORLG00020000404	safb	68	39.539	Oryzias_latipes_hni
ENSVVUG00000013720	SAFB	81	43.031	ENSORLG00015010733	safb	67	41.290	Oryzias_latipes_hsok
ENSVVUG00000013720	SAFB	87	88.191	ENSOGAG00000027769	SAFB	100	87.757	Otolemur_garnettii
ENSVVUG00000013720	SAFB	87	87.364	ENSOARG00000007662	-	100	85.294	Ovis_aries
ENSVVUG00000013720	SAFB	68	84.476	ENSOARG00000007856	-	100	84.196	Ovis_aries
ENSVVUG00000013720	SAFB	87	93.145	ENSPPAG00000035129	SAFB	100	93.145	Pan_paniscus
ENSVVUG00000013720	SAFB	87	98.366	ENSPPRG00000017197	SAFB	100	98.366	Panthera_pardus
ENSVVUG00000013720	SAFB	87	93.145	ENSPTRG00000010335	SAFB	100	93.145	Pan_troglodytes
ENSVVUG00000013720	SAFB	87	93.471	ENSPANG00000007770	SAFB	100	93.471	Papio_anubis
ENSVVUG00000013720	SAFB	80	43.107	ENSPKIG00000009902	safb	87	41.810	Paramormyrops_kingsleyae
ENSVVUG00000013720	SAFB	87	62.526	ENSPSIG00000009367	-	64	61.020	Pelodiscus_sinensis
ENSVVUG00000013720	SAFB	87	62.842	ENSPSIG00000011679	-	99	63.914	Pelodiscus_sinensis
ENSVVUG00000013720	SAFB	87	84.845	ENSPEMG00000020428	Safb	100	84.845	Peromyscus_maniculatus_bairdii
ENSVVUG00000013720	SAFB	51	80.996	ENSPCIG00000009504	-	100	80.258	Phascolarctos_cinereus
ENSVVUG00000013720	SAFB	81	39.459	ENSPFOG00000007745	safb	74	40.549	Poecilia_formosa
ENSVVUG00000013720	SAFB	81	38.164	ENSPLAG00000001614	safb	68	39.644	Poecilia_latipinna
ENSVVUG00000013720	SAFB	81	39.346	ENSPMEG00000021023	safb	70	40.492	Poecilia_mexicana
ENSVVUG00000013720	SAFB	87	93.355	ENSPPYG00000009428	SAFB	100	93.355	Pongo_abelii
ENSVVUG00000013720	SAFB	87	86.782	ENSPCAG00000006475	SAFB	100	87.216	Procavia_capensis
ENSVVUG00000013720	SAFB	87	85.683	ENSPCOG00000014090	SAFB	100	83.134	Propithecus_coquereli
ENSVVUG00000013720	SAFB	87	86.398	ENSPVAG00000004913	SAFB	100	86.834	Pteropus_vampyrus
ENSVVUG00000013720	SAFB	81	44.481	ENSPNAG00000021838	safb	66	44.268	Pygocentrus_nattereri
ENSVVUG00000013720	SAFB	87	83.881	ENSRNOG00000050543	Safb	100	84.517	Rattus_norvegicus
ENSVVUG00000013720	SAFB	87	80.413	ENSRBIG00000042509	SAFB	88	96.774	Rhinopithecus_bieti
ENSVVUG00000013720	SAFB	87	93.580	ENSRROG00000029278	SAFB	100	93.580	Rhinopithecus_roxellana
ENSVVUG00000013720	SAFB	87	93.464	ENSSBOG00000026291	SAFB	100	93.464	Saimiri_boliviensis_boliviensis
ENSVVUG00000013720	SAFB	83	44.373	ENSSFOG00015008156	safb	67	46.057	Scleropages_formosus
ENSVVUG00000013720	SAFB	84	40.043	ENSSMAG00000009316	safb	66	42.173	Scophthalmus_maximus
ENSVVUG00000013720	SAFB	83	43.122	ENSSDUG00000009652	safb	72	42.492	Seriola_dumerili
ENSVVUG00000013720	SAFB	83	43.380	ENSSLDG00000001670	safb	66	42.584	Seriola_lalandi_dorsalis
ENSVVUG00000013720	SAFB	81	87.048	ENSSARG00000010475	SAFB	100	87.515	Sorex_araneus
ENSVVUG00000013720	SAFB	50	58.868	ENSSPUG00000009747	-	99	58.663	Sphenodon_punctatus
ENSVVUG00000013720	SAFB	81	41.505	ENSSPAG00000015682	safb	70	41.071	Stegastes_partitus
ENSVVUG00000013720	SAFB	90	94.896	ENSSSCG00000013522	SAFB	99	96.144	Sus_scrofa
ENSVVUG00000013720	SAFB	81	62.245	ENSTGUG00000000489	-	97	65.533	Taeniopygia_guttata
ENSVVUG00000013720	SAFB	84	65.398	ENSTGUG00000000502	-	97	65.167	Taeniopygia_guttata
ENSVVUG00000013720	SAFB	79	40.967	ENSTRUG00000003567	safb	66	40.968	Takifugu_rubripes
ENSVVUG00000013720	SAFB	77	44.086	ENSTNIG00000015470	safb	76	40.981	Tetraodon_nigroviridis
ENSVVUG00000013720	SAFB	65	84.848	ENSTBEG00000013124	-	66	91.667	Tupaia_belangeri
ENSVVUG00000013720	SAFB	80	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSVVUG00000013720	SAFB	68	96.547	ENSUAMG00000024543	SAFB	100	91.176	Ursus_americanus
ENSVVUG00000013720	SAFB	82	96.263	ENSUMAG00000009734	SAFB	97	96.774	Ursus_maritimus
ENSVVUG00000013720	SAFB	64	97.692	ENSVPAG00000012043	SAFB	79	97.692	Vicugna_pacos
ENSVVUG00000013720	SAFB	57	50.741	ENSXETG00000008755	safb	64	69.318	Xenopus_tropicalis
ENSVVUG00000013720	SAFB	70	45.399	ENSXMAG00000003458	safb	53	51.613	Xiphophorus_maculatus