EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000013908 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 13552 bases
Position: chrNBDQ01000065.1:229955-243506
Accession: 112926337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000018890	KH_1	PF00013.29	3e-10	1	1
ENSVVUP00000018886	KH_1	PF00013.29	3.4e-10	1	1
ENSVVUP00000018890	DEAD	PF00270.29	2.2e-42	1	1
ENSVVUP00000018886	DEAD	PF00270.29	2.3e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000024911	-	1842	-	ENSVVUP00000018890	602 (aa)	-	-
ENSVVUT00000024906	-	1974	XM_026007363	ENSVVUP00000018886	646 (aa)	XP_025863148	UPI000DF69577

Gene Model

Click here to download ENSVVUG00000013908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000013908's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000013908	-	64	35.013	ENSVVUG00000004697	DDX47	80	35.013
ENSVVUG00000013908	-	91	73.083	ENSVVUG00000012789	-	95	73.424
ENSVVUG00000013908	-	77	34.940	ENSVVUG00000006095	DDX42	50	34.940
ENSVVUG00000013908	-	73	31.544	ENSVVUG00000001095	DDX59	69	31.544
ENSVVUG00000013908	-	64	42.169	ENSVVUG00000019648	DDX23	50	42.169
ENSVVUG00000013908	-	57	34.670	ENSVVUG00000020366	DDX50	58	34.670
ENSVVUG00000013908	-	62	40.306	ENSVVUG00000011589	DDX3X	59	40.306
ENSVVUG00000013908	-	57	30.500	ENSVVUG00000028399	DDX31	58	30.500
ENSVVUG00000013908	-	66	39.320	ENSVVUG00000030358	DDX3Y	66	40.306
ENSVVUG00000013908	-	57	32.133	ENSVVUG00000027506	DDX55	71	31.579
ENSVVUG00000013908	-	74	32.035	ENSVVUG00000020209	DDX52	88	31.712
ENSVVUG00000013908	-	59	33.148	ENSVVUG00000013242	EIF4A2	86	33.148
ENSVVUG00000013908	-	75	43.363	ENSVVUG00000006263	DDX5	73	43.043
ENSVVUG00000013908	-	68	36.993	ENSVVUG00000026020	DDX41	63	36.993
ENSVVUG00000013908	-	59	33.708	ENSVVUG00000024121	DDX6	72	33.708
ENSVVUG00000013908	-	61	39.788	ENSVVUG00000021369	DDX4	54	39.788
ENSVVUG00000013908	-	56	32.448	ENSVVUG00000017984	EIF4A3	81	32.448
ENSVVUG00000013908	-	64	33.165	ENSVVUG00000007767	DDX49	77	33.165
ENSVVUG00000013908	-	60	43.443	ENSVVUG00000022762	DDX17	87	43.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000013908	-	100	88.462	ENSAMEG00000007851	-	100	88.462	Ailuropoda_melanoleuca
ENSVVUG00000013908	-	100	77.125	ENSBTAG00000021814	-	99	77.125	Bos_taurus
ENSVVUG00000013908	-	100	97.678	ENSCAFG00020010029	-	100	97.678	Canis_lupus_dingo
ENSVVUG00000013908	-	99	97.830	ENSCAFG00020002717	-	99	97.830	Canis_lupus_dingo
ENSVVUG00000013908	-	100	76.971	ENSCHIG00000017351	-	99	76.971	Capra_hircus
ENSVVUG00000013908	-	78	76.892	ENSCAPG00000004247	-	100	76.892	Cavia_aperea
ENSVVUG00000013908	-	100	81.298	ENSCPOG00000003991	-	100	81.298	Cavia_porcellus
ENSVVUG00000013908	-	100	73.302	ENSCLAG00000010261	-	100	73.302	Chinchilla_lanigera
ENSVVUG00000013908	-	65	78.698	ENSCHOG00000003450	-	70	78.698	Choloepus_hoffmanni
ENSVVUG00000013908	-	100	80.805	ENSCGRG00001001145	Ddx43	100	80.805	Cricetulus_griseus_chok1gshd
ENSVVUG00000013908	-	87	84.192	ENSCGRG00000010217	Ddx43	100	84.192	Cricetulus_griseus_crigri
ENSVVUG00000013908	-	100	82.055	ENSDNOG00000017589	-	99	82.055	Dasypus_novemcinctus
ENSVVUG00000013908	-	100	81.298	ENSDORG00000030010	Ddx43	100	81.298	Dipodomys_ordii
ENSVVUG00000013908	-	80	87.278	ENSETEG00000001887	-	81	87.278	Echinops_telfairi
ENSVVUG00000013908	-	100	82.562	ENSEASG00005004346	-	89	82.562	Equus_asinus_asinus
ENSVVUG00000013908	-	100	82.562	ENSECAG00000017971	DDX43	98	82.562	Equus_caballus
ENSVVUG00000013908	-	100	85.781	ENSFCAG00000031631	-	99	85.781	Felis_catus
ENSVVUG00000013908	-	87	80.995	ENSHGLG00000001118	-	100	80.995	Heterocephalus_glaber_female
ENSVVUG00000013908	-	97	77.600	ENSHGLG00100011895	-	99	77.532	Heterocephalus_glaber_male
ENSVVUG00000013908	-	87	73.357	ENSSTOG00000032538	-	100	73.357	Ictidomys_tridecemlineatus
ENSVVUG00000013908	-	100	79.907	ENSJJAG00000014184	Ddx43	100	79.907	Jaculus_jaculus
ENSVVUG00000013908	-	93	83.306	ENSLAFG00000012755	-	100	83.306	Loxodonta_africana
ENSVVUG00000013908	-	100	80.031	ENSMAUG00000001441	Ddx43	100	80.031	Mesocricetus_auratus
ENSVVUG00000013908	-	100	79.815	ENSMOCG00000012956	Ddx43	100	79.815	Microtus_ochrogaster
ENSVVUG00000013908	-	100	80.031	MGP_CAROLIEiJ_G0032467	Ddx43	100	80.031	Mus_caroli
ENSVVUG00000013908	-	100	80.341	ENSMUSG00000070291	Ddx43	100	80.341	Mus_musculus
ENSVVUG00000013908	-	91	85.516	MGP_PahariEiJ_G0015333	Ddx43	100	85.516	Mus_pahari
ENSVVUG00000013908	-	100	80.341	MGP_SPRETEiJ_G0033607	Ddx43	100	80.341	Mus_spretus
ENSVVUG00000013908	-	100	89.335	ENSMPUG00000004342	-	99	89.335	Mustela_putorius_furo
ENSVVUG00000013908	-	100	83.410	ENSMLUG00000017604	-	100	83.410	Myotis_lucifugus
ENSVVUG00000013908	-	100	80.960	ENSNGAG00000015102	Ddx43	100	81.144	Nannospalax_galili
ENSVVUG00000013908	-	75	82.143	ENSOPRG00000013523	-	86	82.143	Ochotona_princeps
ENSVVUG00000013908	-	84	80.147	ENSODEG00000016207	-	99	80.147	Octodon_degus
ENSVVUG00000013908	-	100	77.399	ENSOCUG00000006338	-	100	77.399	Oryctolagus_cuniculus
ENSVVUG00000013908	-	98	69.322	ENSOCUG00000025811	-	98	69.322	Oryctolagus_cuniculus
ENSVVUG00000013908	-	100	76.507	ENSOARG00000010873	-	99	76.507	Ovis_aries
ENSVVUG00000013908	-	100	86.244	ENSPTIG00000017842	-	99	86.244	Panthera_tigris_altaica
ENSVVUG00000013908	-	87	84.547	ENSPEMG00000023986	Ddx43	100	84.547	Peromyscus_maniculatus_bairdii
ENSVVUG00000013908	-	99	79.721	ENSPCAG00000005962	-	99	79.876	Procavia_capensis
ENSVVUG00000013908	-	87	87.234	ENSPVAG00000012718	-	99	87.234	Pteropus_vampyrus
ENSVVUG00000013908	-	100	80.371	ENSRNOG00000050868	Ddx43	100	80.341	Rattus_norvegicus
ENSVVUG00000013908	-	84	83.729	ENSSARG00000013493	-	99	83.729	Sorex_araneus
ENSVVUG00000013908	-	100	78.516	ENSSSCG00000004287	-	99	78.671	Sus_scrofa
ENSVVUG00000013908	-	87	73.535	ENSTTRG00000001488	-	99	73.535	Tursiops_truncatus
ENSVVUG00000013908	-	83	85.478	ENSUAMG00000012894	-	83	85.478	Ursus_americanus
ENSVVUG00000013908	-	100	88.735	ENSUMAG00000012291	-	99	88.735	Ursus_maritimus
ENSVVUG00000013908	-	94	73.934	ENSVPAG00000004969	-	100	73.934	Vicugna_pacos