EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000014201 (Gene tree)
Gene ID: -
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 37784 bases
Position: chrNBDQ01000036.1:14987915-15025698
Accession: 29434
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000019427	zf-CCCH	PF00642.24	7.3e-05	1	1
ENSVVUP00000019398	zf-CCCH	PF00642.24	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000025752	RC3H1-202	1443	-	ENSVVUP00000019427	480 (aa)	-	-
ENSVVUT00000025720	RC3H1-201	3411	-	ENSVVUP00000019398	1136 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000014201's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000014201's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000014201	RC3H1	93	82.889	ENSVVUG00000009519	RC3H2	90	53.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000014201	RC3H1	100	96.658	ENSG00000135870	RC3H1	100	96.658	Homo_sapiens
ENSVVUG00000014201	RC3H1	100	98.327	ENSAMEG00000015657	RC3H1	100	98.327	Ailuropoda_melanoleuca
ENSVVUG00000014201	RC3H1	93	95.604	ENSAPLG00000005341	RC3H1	100	87.380	Anas_platyrhynchos
ENSVVUG00000014201	RC3H1	93	95.165	ENSACAG00000015271	RC3H1	100	84.917	Anolis_carolinensis
ENSVVUG00000014201	RC3H1	100	96.922	ENSANAG00000036716	RC3H1	100	96.922	Aotus_nancymaae
ENSVVUG00000014201	RC3H1	100	95.602	ENSBTAG00000052708	RC3H1	100	95.602	Bos_taurus
ENSVVUG00000014201	RC3H1	100	96.570	ENSCJAG00000009106	RC3H1	100	96.570	Callithrix_jacchus
ENSVVUG00000014201	RC3H1	100	99.472	ENSCAFG00000014434	RC3H1	100	99.472	Canis_familiaris
ENSVVUG00000014201	RC3H1	100	99.384	ENSCAFG00020017112	RC3H1	100	99.546	Canis_lupus_dingo
ENSVVUG00000014201	RC3H1	100	96.039	ENSCHIG00000002873	RC3H1	100	96.039	Capra_hircus
ENSVVUG00000014201	RC3H1	99	94.894	ENSTSYG00000003913	RC3H1	99	94.894	Carlito_syrichta
ENSVVUG00000014201	RC3H1	100	90.853	ENSCPOG00000004349	RC3H1	100	90.589	Cavia_porcellus
ENSVVUG00000014201	RC3H1	100	94.459	ENSCCAG00000025652	RC3H1	98	96.663	Cebus_capucinus
ENSVVUG00000014201	RC3H1	100	96.834	ENSCATG00000033497	RC3H1	100	96.834	Cercocebus_atys
ENSVVUG00000014201	RC3H1	100	94.283	ENSCLAG00000011267	RC3H1	100	94.283	Chinchilla_lanigera
ENSVVUG00000014201	RC3H1	96	96.881	ENSCSAG00000011823	RC3H1	85	96.881	Chlorocebus_sabaeus
ENSVVUG00000014201	RC3H1	93	96.304	ENSCPBG00000014670	RC3H1	100	88.821	Chrysemys_picta_bellii
ENSVVUG00000014201	RC3H1	100	96.837	ENSCANG00000032120	RC3H1	100	96.837	Colobus_angolensis_palliatus
ENSVVUG00000014201	RC3H1	100	94.190	ENSCGRG00001020812	Rc3h1	100	93.750	Cricetulus_griseus_chok1gshd
ENSVVUG00000014201	RC3H1	100	94.190	ENSCGRG00000011952	Rc3h1	100	93.750	Cricetulus_griseus_crigri
ENSVVUG00000014201	RC3H1	55	94.728	ENSDNOG00000011494	RC3H1	99	94.728	Dasypus_novemcinctus
ENSVVUG00000014201	RC3H1	100	94.982	ENSDORG00000004855	Rc3h1	100	94.982	Dipodomys_ordii
ENSVVUG00000014201	RC3H1	82	96.186	ENSETEG00000012064	RC3H1	87	96.186	Echinops_telfairi
ENSVVUG00000014201	RC3H1	100	95.423	ENSEASG00005017000	RC3H1	100	95.423	Equus_asinus_asinus
ENSVVUG00000014201	RC3H1	100	95.246	ENSECAG00000021208	RC3H1	100	95.246	Equus_caballus
ENSVVUG00000014201	RC3H1	93	79.425	ENSEEUG00000014861	RC3H1	93	82.931	Erinaceus_europaeus
ENSVVUG00000014201	RC3H1	100	97.449	ENSFCAG00000014924	RC3H1	100	97.449	Felis_catus
ENSVVUG00000014201	RC3H1	93	96.239	ENSFALG00000002947	RC3H1	100	85.789	Ficedula_albicollis
ENSVVUG00000014201	RC3H1	100	94.723	ENSFDAG00000013303	RC3H1	100	94.723	Fukomys_damarensis
ENSVVUG00000014201	RC3H1	93	96.018	ENSGALG00000004587	RC3H1	100	86.439	Gallus_gallus
ENSVVUG00000014201	RC3H1	93	96.239	ENSGAGG00000018194	RC3H1	100	87.314	Gopherus_agassizii
ENSVVUG00000014201	RC3H1	100	89.921	ENSGGOG00000005735	RC3H1	100	89.921	Gorilla_gorilla
ENSVVUG00000014201	RC3H1	93	85.619	ENSHGLG00000004183	-	99	88.649	Heterocephalus_glaber_female
ENSVVUG00000014201	RC3H1	100	93.843	ENSHGLG00100008577	RC3H1	100	93.843	Heterocephalus_glaber_male
ENSVVUG00000014201	RC3H1	92	89.310	ENSHCOG00000009753	rc3h1b	93	89.800	Hippocampus_comes
ENSVVUG00000014201	RC3H1	100	95.866	ENSSTOG00000016033	RC3H1	100	95.866	Ictidomys_tridecemlineatus
ENSVVUG00000014201	RC3H1	100	94.542	ENSJJAG00000018915	Rc3h1	100	94.278	Jaculus_jaculus
ENSVVUG00000014201	RC3H1	98	91.004	ENSLACG00000016186	RC3H1	100	77.429	Latimeria_chalumnae
ENSVVUG00000014201	RC3H1	97	96.639	ENSLAFG00000004367	RC3H1	100	96.639	Loxodonta_africana
ENSVVUG00000014201	RC3H1	100	96.746	ENSMFAG00000033725	RC3H1	100	96.746	Macaca_fascicularis
ENSVVUG00000014201	RC3H1	100	96.658	ENSMMUG00000000630	RC3H1	100	96.658	Macaca_mulatta
ENSVVUG00000014201	RC3H1	100	96.834	ENSMNEG00000035968	RC3H1	100	96.834	Macaca_nemestrina
ENSVVUG00000014201	RC3H1	100	96.746	ENSMLEG00000037455	RC3H1	100	96.746	Mandrillus_leucophaeus
ENSVVUG00000014201	RC3H1	93	96.681	ENSMAUG00000020864	Rc3h1	94	93.587	Mesocricetus_auratus
ENSVVUG00000014201	RC3H1	100	96.567	ENSMICG00000003000	RC3H1	100	96.567	Microcebus_murinus
ENSVVUG00000014201	RC3H1	93	93.107	ENSMOCG00000016587	Rc3h1	98	92.729	Microtus_ochrogaster
ENSVVUG00000014201	RC3H1	100	91.037	ENSMODG00000004289	RC3H1	100	91.652	Monodelphis_domestica
ENSVVUG00000014201	RC3H1	93	90.828	ENSMALG00000016106	rc3h1b	91	92.466	Monopterus_albus
ENSVVUG00000014201	RC3H1	91	92.466	ENSMALG00000016581	-	97	92.466	Monopterus_albus
ENSVVUG00000014201	RC3H1	100	93.398	MGP_CAROLIEiJ_G0014756	Rc3h1	100	92.958	Mus_caroli
ENSVVUG00000014201	RC3H1	100	93.310	ENSMUSG00000040423	Rc3h1	100	92.870	Mus_musculus
ENSVVUG00000014201	RC3H1	100	93.046	MGP_PahariEiJ_G0027992	Rc3h1	100	92.606	Mus_pahari
ENSVVUG00000014201	RC3H1	100	93.134	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.694	Mus_spretus
ENSVVUG00000014201	RC3H1	100	97.713	ENSMPUG00000004747	RC3H1	100	97.713	Mustela_putorius_furo
ENSVVUG00000014201	RC3H1	100	95.246	ENSMLUG00000011127	RC3H1	100	95.246	Myotis_lucifugus
ENSVVUG00000014201	RC3H1	100	95.423	ENSNGAG00000011135	Rc3h1	100	94.982	Nannospalax_galili
ENSVVUG00000014201	RC3H1	100	96.570	ENSNLEG00000015327	RC3H1	100	96.570	Nomascus_leucogenys
ENSVVUG00000014201	RC3H1	99	82.716	ENSOPRG00000013068	RC3H1	99	82.716	Ochotona_princeps
ENSVVUG00000014201	RC3H1	100	94.019	ENSODEG00000014185	RC3H1	100	94.019	Octodon_degus
ENSVVUG00000014201	RC3H1	100	90.862	ENSOANG00000000924	RC3H1	100	90.949	Ornithorhynchus_anatinus
ENSVVUG00000014201	RC3H1	99	96.071	ENSOCUG00000004930	RC3H1	98	96.071	Oryctolagus_cuniculus
ENSVVUG00000014201	RC3H1	100	89.367	ENSOGAG00000004044	RC3H1	100	89.367	Otolemur_garnettii
ENSVVUG00000014201	RC3H1	100	96.066	ENSOARG00000013011	RC3H1	100	96.066	Ovis_aries
ENSVVUG00000014201	RC3H1	100	96.661	ENSPPAG00000039253	RC3H1	100	96.661	Pan_paniscus
ENSVVUG00000014201	RC3H1	100	97.007	ENSPPRG00000009007	RC3H1	100	97.007	Panthera_pardus
ENSVVUG00000014201	RC3H1	100	97.283	ENSPTIG00000015326	RC3H1	100	97.283	Panthera_tigris_altaica
ENSVVUG00000014201	RC3H1	100	96.661	ENSPTRG00000001702	RC3H1	100	96.661	Pan_troglodytes
ENSVVUG00000014201	RC3H1	100	96.746	ENSPANG00000008886	RC3H1	100	96.746	Papio_anubis
ENSVVUG00000014201	RC3H1	93	96.018	ENSPSIG00000016181	RC3H1	100	88.724	Pelodiscus_sinensis
ENSVVUG00000014201	RC3H1	92	91.011	ENSPMGG00000015037	rc3h1b	91	91.011	Periophthalmus_magnuspinnatus
ENSVVUG00000014201	RC3H1	100	93.750	ENSPEMG00000011966	Rc3h1	100	93.222	Peromyscus_maniculatus_bairdii
ENSVVUG00000014201	RC3H1	52	88.538	ENSPMAG00000000074	rc3h1a	100	55.929	Petromyzon_marinus
ENSVVUG00000014201	RC3H1	94	96.903	ENSPCIG00000002058	RC3H1	95	98.864	Phascolarctos_cinereus
ENSVVUG00000014201	RC3H1	100	93.404	ENSPPYG00000000490	RC3H1	98	96.092	Pongo_abelii
ENSVVUG00000014201	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSVVUG00000014201	RC3H1	83	96.060	ENSPCOG00000021795	RC3H1	96	96.060	Propithecus_coquereli
ENSVVUG00000014201	RC3H1	100	87.676	ENSPVAG00000007593	RC3H1	100	87.676	Pteropus_vampyrus
ENSVVUG00000014201	RC3H1	91	91.818	ENSPNAG00000017240	rc3h1b	97	88.865	Pygocentrus_nattereri
ENSVVUG00000014201	RC3H1	98	85.983	ENSPNAG00000023439	rc3h1a	96	90.930	Pygocentrus_nattereri
ENSVVUG00000014201	RC3H1	100	96.749	ENSRBIG00000037743	RC3H1	100	96.749	Rhinopithecus_bieti
ENSVVUG00000014201	RC3H1	100	96.658	ENSRROG00000036546	RC3H1	100	96.658	Rhinopithecus_roxellana
ENSVVUG00000014201	RC3H1	93	87.630	ENSSBOG00000010664	RC3H1	100	90.660	Saimiri_boliviensis_boliviensis
ENSVVUG00000014201	RC3H1	100	90.255	ENSSHAG00000007589	RC3H1	100	90.869	Sarcophilus_harrisii
ENSVVUG00000014201	RC3H1	91	85.811	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSVVUG00000014201	RC3H1	100	83.843	ENSSPUG00000018472	RC3H1	100	83.217	Sphenodon_punctatus
ENSVVUG00000014201	RC3H1	100	96.743	ENSSSCG00000015498	RC3H1	100	96.743	Sus_scrofa
ENSVVUG00000014201	RC3H1	93	96.018	ENSTGUG00000004090	RC3H1	100	86.778	Taeniopygia_guttata
ENSVVUG00000014201	RC3H1	93	96.903	ENSTBEG00000005015	RC3H1	89	96.748	Tupaia_belangeri
ENSVVUG00000014201	RC3H1	100	96.313	ENSTTRG00000008572	RC3H1	100	96.313	Tursiops_truncatus
ENSVVUG00000014201	RC3H1	100	97.359	ENSUAMG00000019525	RC3H1	100	97.359	Ursus_americanus
ENSVVUG00000014201	RC3H1	100	97.889	ENSUMAG00000020087	RC3H1	100	97.889	Ursus_maritimus
ENSVVUG00000014201	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSVVUG00000014201	RC3H1	98	90.702	ENSXETG00000020030	rc3h1	100	77.730	Xenopus_tropicalis