EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000014222 (Gene tree)
Gene ID: -
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 8677 bases
Position: chrNBDQ01000131.1:1252172-1260848
Accession: 112933691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000019261	MBD	PF01429.19	2.7e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000025506	MBD4-201	1946	XM_026016898	ENSVVUP00000019261	570 (aa)	XP_025872681	UPI000DF6DDCE

Gene Model

Click here to download ENSVVUG00000014222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000014222's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000014222	MBD4	99	76.644	ENSG00000129071	MBD4	98	78.696	Homo_sapiens
ENSVVUG00000014222	MBD4	100	87.018	ENSAMEG00000004562	MBD4	99	87.018	Ailuropoda_melanoleuca
ENSVVUG00000014222	MBD4	85	42.713	ENSAOCG00000001157	mbd4	95	43.687	Amphiprion_ocellaris
ENSVVUG00000014222	MBD4	85	42.713	ENSAPEG00000016131	mbd4	95	43.200	Amphiprion_percula
ENSVVUG00000014222	MBD4	86	42.582	ENSATEG00000014594	MBD4	87	42.582	Anabas_testudineus
ENSVVUG00000014222	MBD4	99	72.840	ENSBTAG00000021645	MBD4	100	72.840	Bos_taurus
ENSVVUG00000014222	MBD4	99	75.044	ENSCJAG00000017293	MBD4	99	75.044	Callithrix_jacchus
ENSVVUG00000014222	MBD4	100	97.544	ENSCAFG00000004867	MBD4	100	97.544	Canis_familiaris
ENSVVUG00000014222	MBD4	100	97.544	ENSCAFG00020007082	MBD4	100	97.544	Canis_lupus_dingo
ENSVVUG00000014222	MBD4	99	73.369	ENSCHIG00000009760	MBD4	100	73.369	Capra_hircus
ENSVVUG00000014222	MBD4	99	75.390	ENSCCAG00000029796	MBD4	99	75.390	Cebus_capucinus
ENSVVUG00000014222	MBD4	99	75.694	ENSCATG00000035211	MBD4	99	75.563	Cercocebus_atys
ENSVVUG00000014222	MBD4	99	68.000	ENSCLAG00000008974	MBD4	100	68.000	Chinchilla_lanigera
ENSVVUG00000014222	MBD4	99	75.521	ENSCSAG00000009037	MBD4	99	75.390	Chlorocebus_sabaeus
ENSVVUG00000014222	MBD4	86	51.167	ENSCPBG00000014704	MBD4	89	51.167	Chrysemys_picta_bellii
ENSVVUG00000014222	MBD4	99	75.174	ENSCANG00000007120	MBD4	99	75.174	Colobus_angolensis_palliatus
ENSVVUG00000014222	MBD4	99	66.491	ENSCGRG00001003507	Mbd4	100	67.193	Cricetulus_griseus_chok1gshd
ENSVVUG00000014222	MBD4	99	66.491	ENSCGRG00000010974	Mbd4	100	67.193	Cricetulus_griseus_crigri
ENSVVUG00000014222	MBD4	99	76.307	ENSDNOG00000049619	MBD4	100	76.307	Dasypus_novemcinctus
ENSVVUG00000014222	MBD4	81	62.821	ENSDORG00000000902	-	99	60.931	Dipodomys_ordii
ENSVVUG00000014222	MBD4	99	79.965	ENSEASG00005014800	MBD4	100	79.965	Equus_asinus_asinus
ENSVVUG00000014222	MBD4	99	80.314	ENSECAG00000022106	MBD4	100	80.314	Equus_caballus
ENSVVUG00000014222	MBD4	95	62.795	ENSEEUG00000011459	MBD4	99	62.795	Erinaceus_europaeus
ENSVVUG00000014222	MBD4	99	83.831	ENSFCAG00000000083	MBD4	99	83.831	Felis_catus
ENSVVUG00000014222	MBD4	82	44.915	ENSFALG00000013663	MBD4	99	45.082	Ficedula_albicollis
ENSVVUG00000014222	MBD4	89	50.851	ENSGAGG00000018644	MBD4	92	50.851	Gopherus_agassizii
ENSVVUG00000014222	MBD4	99	75.606	ENSGGOG00000010698	MBD4	99	75.606	Gorilla_gorilla
ENSVVUG00000014222	MBD4	99	69.913	ENSHGLG00000009034	MBD4	100	69.913	Heterocephalus_glaber_female
ENSVVUG00000014222	MBD4	99	70.087	ENSHGLG00100000135	MBD4	100	70.087	Heterocephalus_glaber_male
ENSVVUG00000014222	MBD4	99	71.254	ENSSTOG00000020663	MBD4	100	71.254	Ictidomys_tridecemlineatus
ENSVVUG00000014222	MBD4	99	73.657	ENSLAFG00000010609	MBD4	99	73.657	Loxodonta_africana
ENSVVUG00000014222	MBD4	99	75.174	ENSMFAG00000002266	MBD4	99	75.174	Macaca_fascicularis
ENSVVUG00000014222	MBD4	99	74.740	ENSMMUG00000012723	MBD4	99	74.740	Macaca_mulatta
ENSVVUG00000014222	MBD4	95	73.732	ENSMNEG00000029752	MBD4	99	73.732	Macaca_nemestrina
ENSVVUG00000014222	MBD4	99	75.174	ENSMLEG00000024859	MBD4	99	75.174	Mandrillus_leucophaeus
ENSVVUG00000014222	MBD4	99	77.083	ENSMICG00000008022	MBD4	99	77.083	Microcebus_murinus
ENSVVUG00000014222	MBD4	66	48.819	ENSMOCG00000002466	-	95	48.819	Microtus_ochrogaster
ENSVVUG00000014222	MBD4	86	60.000	ENSMODG00000006399	-	99	60.000	Monodelphis_domestica
ENSVVUG00000014222	MBD4	99	66.031	MGP_CAROLIEiJ_G0028760	Mbd4	100	66.031	Mus_caroli
ENSVVUG00000014222	MBD4	99	65.858	ENSMUSG00000030322	Mbd4	100	65.858	Mus_musculus
ENSVVUG00000014222	MBD4	99	65.976	MGP_PahariEiJ_G0022511	-	100	65.976	Mus_pahari
ENSVVUG00000014222	MBD4	99	64.767	MGP_SPRETEiJ_G0029788	Mbd4	100	64.767	Mus_spretus
ENSVVUG00000014222	MBD4	100	84.912	ENSMPUG00000017195	MBD4	100	84.912	Mustela_putorius_furo
ENSVVUG00000014222	MBD4	94	81.331	ENSMLUG00000014766	MBD4	99	81.331	Myotis_lucifugus
ENSVVUG00000014222	MBD4	99	76.655	ENSNLEG00000005337	MBD4	99	76.655	Nomascus_leucogenys
ENSVVUG00000014222	MBD4	99	62.694	ENSOPRG00000000473	MBD4	99	62.694	Ochotona_princeps
ENSVVUG00000014222	MBD4	85	42.105	ENSONIG00000017212	mbd4	100	42.105	Oreochromis_niloticus
ENSVVUG00000014222	MBD4	72	43.868	ENSOANG00000004589	-	98	42.921	Ornithorhynchus_anatinus
ENSVVUG00000014222	MBD4	99	64.310	ENSOCUG00000013006	MBD4	99	64.310	Oryctolagus_cuniculus
ENSVVUG00000014222	MBD4	60	52.381	ENSORLG00000011049	mbd4	87	52.381	Oryzias_latipes
ENSVVUG00000014222	MBD4	99	70.609	ENSOGAG00000010236	MBD4	100	70.609	Otolemur_garnettii
ENSVVUG00000014222	MBD4	99	73.016	ENSOARG00000014699	MBD4	100	73.016	Ovis_aries
ENSVVUG00000014222	MBD4	99	75.779	ENSPPAG00000036528	MBD4	99	75.779	Pan_paniscus
ENSVVUG00000014222	MBD4	99	82.601	ENSPPRG00000016480	MBD4	99	82.601	Panthera_pardus
ENSVVUG00000014222	MBD4	99	76.125	ENSPTRG00000015377	MBD4	99	76.125	Pan_troglodytes
ENSVVUG00000014222	MBD4	99	75.910	ENSPANG00000015047	MBD4	99	75.910	Papio_anubis
ENSVVUG00000014222	MBD4	90	49.084	ENSPSIG00000007892	MBD4	91	49.084	Pelodiscus_sinensis
ENSVVUG00000014222	MBD4	94	57.459	ENSPEMG00000006226	Mbd4	99	58.011	Peromyscus_maniculatus_bairdii
ENSVVUG00000014222	MBD4	89	58.027	ENSPCIG00000002276	-	98	58.027	Phascolarctos_cinereus
ENSVVUG00000014222	MBD4	99	75.563	ENSPPYG00000013417	MBD4	99	75.563	Pongo_abelii
ENSVVUG00000014222	MBD4	96	70.705	ENSPCAG00000012915	MBD4	99	70.705	Procavia_capensis
ENSVVUG00000014222	MBD4	99	79.443	ENSPVAG00000005238	MBD4	99	79.443	Pteropus_vampyrus
ENSVVUG00000014222	MBD4	99	66.378	ENSRNOG00000010919	Mbd4	100	66.378	Rattus_norvegicus
ENSVVUG00000014222	MBD4	99	75.521	ENSRBIG00000027722	MBD4	99	75.390	Rhinopithecus_bieti
ENSVVUG00000014222	MBD4	99	75.347	ENSRROG00000029136	MBD4	99	75.217	Rhinopithecus_roxellana
ENSVVUG00000014222	MBD4	99	74.132	ENSSBOG00000016810	MBD4	99	74.132	Saimiri_boliviensis_boliviensis
ENSVVUG00000014222	MBD4	98	55.379	ENSSHAG00000012953	MBD4	99	55.379	Sarcophilus_harrisii
ENSVVUG00000014222	MBD4	85	43.058	ENSSFOG00015016292	mbd4	95	43.058	Scleropages_formosus
ENSVVUG00000014222	MBD4	81	61.670	ENSSARG00000004496	-	80	61.670	Sorex_araneus
ENSVVUG00000014222	MBD4	86	51.569	ENSSPUG00000017344	MBD4	91	51.569	Sphenodon_punctatus
ENSVVUG00000014222	MBD4	99	76.522	ENSSSCG00000033303	MBD4	100	76.522	Sus_scrofa
ENSVVUG00000014222	MBD4	85	43.053	ENSTNIG00000017927	mbd4	100	43.053	Tetraodon_nigroviridis
ENSVVUG00000014222	MBD4	88	63.303	ENSTBEG00000003041	-	87	63.303	Tupaia_belangeri
ENSVVUG00000014222	MBD4	95	78.650	ENSTTRG00000011265	MBD4	98	78.650	Tursiops_truncatus
ENSVVUG00000014222	MBD4	87	88.259	ENSUAMG00000000814	MBD4	100	88.259	Ursus_americanus
ENSVVUG00000014222	MBD4	99	86.772	ENSUMAG00000017542	MBD4	100	86.772	Ursus_maritimus
ENSVVUG00000014222	MBD4	64	69.124	ENSVPAG00000004040	-	67	69.124	Vicugna_pacos