EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000014628 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 3816 bases
Position: chrNBDQ01000135.1:5528537-5532352
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000019763	APOBEC_N	PF08210.11	2.2e-36	1	1
ENSVVUP00000019760	APOBEC_N	PF08210.11	2.9e-35	1	1
ENSVVUP00000019758	APOBEC_N	PF08210.11	4e-35	1	1
ENSVVUP00000019763	APOBEC_C	PF05240.14	7.1e-29	1	1
ENSVVUP00000019760	APOBEC_C	PF05240.14	7.1e-13	1	1
ENSVVUP00000019758	APOBEC_C	PF05240.14	8.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000026264	-	701	-	ENSVVUP00000019763	156 (aa)	-	-
ENSVVUT00000026261	-	1523	-	ENSVVUP00000019760	160 (aa)	-	-
ENSVVUT00000026259	-	1232	-	ENSVVUP00000019758	177 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000014628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000014628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000014628	-	86	31.915	ENSVVUG00000026617	APOBEC2	59	33.813

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000014628	-	91	51.370	ENSG00000128394	APOBEC3F	77	51.678	Homo_sapiens
ENSVVUG00000014628	-	91	50.685	ENSG00000244509	APOBEC3C	77	51.007	Homo_sapiens
ENSVVUG00000014628	-	94	50.746	ENSG00000243811	APOBEC3D	79	51.007	Homo_sapiens
ENSVVUG00000014628	-	91	52.740	ENSANAG00000030088	-	75	53.020	Aotus_nancymaae
ENSVVUG00000014628	-	72	58.036	ENSCJAG00000015317	-	84	58.036	Callithrix_jacchus
ENSVVUG00000014628	-	91	91.096	ENSCAFG00020002615	-	79	90.667	Canis_lupus_dingo
ENSVVUG00000014628	-	91	45.205	ENSTSYG00000034260	-	77	45.638	Carlito_syrichta
ENSVVUG00000014628	-	90	43.262	ENSTSYG00000030036	-	77	43.262	Carlito_syrichta
ENSVVUG00000014628	-	91	46.575	ENSTSYG00000028254	-	78	46.939	Carlito_syrichta
ENSVVUG00000014628	-	91	51.370	ENSCCAG00000030932	-	66	51.678	Cebus_capucinus
ENSVVUG00000014628	-	93	53.289	ENSCATG00000033502	-	83	53.548	Cercocebus_atys
ENSVVUG00000014628	-	91	50.000	ENSCATG00000043226	APOBEC3C	77	50.336	Cercocebus_atys
ENSVVUG00000014628	-	91	49.315	ENSCSAG00000006402	APOBEC3C	77	49.664	Chlorocebus_sabaeus
ENSVVUG00000014628	-	91	50.685	ENSCSAG00000006382	APOBEC3F	77	51.007	Chlorocebus_sabaeus
ENSVVUG00000014628	-	97	49.624	ENSCANG00000033269	-	77	47.945	Colobus_angolensis_palliatus
ENSVVUG00000014628	-	91	50.000	ENSCANG00000039177	APOBEC3C	77	50.336	Colobus_angolensis_palliatus
ENSVVUG00000014628	-	91	50.685	ENSCANG00000032904	-	77	51.007	Colobus_angolensis_palliatus
ENSVVUG00000014628	-	94	50.000	ENSCANG00000031957	-	79	50.327	Colobus_angolensis_palliatus
ENSVVUG00000014628	-	89	42.857	ENSDNOG00000044642	-	70	42.069	Dasypus_novemcinctus
ENSVVUG00000014628	-	99	42.038	ENSEASG00005018641	-	75	44.937	Equus_asinus_asinus
ENSVVUG00000014628	-	91	48.966	ENSECAG00000006071	-	78	47.945	Equus_caballus
ENSVVUG00000014628	-	91	51.370	ENSGGOG00000038678	APOBEC3F	77	51.678	Gorilla_gorilla
ENSVVUG00000014628	-	91	49.315	ENSGGOG00000036587	-	77	49.664	Gorilla_gorilla
ENSVVUG00000014628	-	91	48.630	ENSHGLG00000017315	-	67	46.980	Heterocephalus_glaber_female
ENSVVUG00000014628	-	91	47.945	ENSHGLG00100003105	-	76	46.154	Heterocephalus_glaber_male
ENSVVUG00000014628	-	91	49.315	ENSMFAG00000004037	APOBEC3F	78	49.664	Macaca_fascicularis
ENSVVUG00000014628	-	91	48.630	ENSMFAG00000016792	APOBEC3C	77	48.993	Macaca_fascicularis
ENSVVUG00000014628	-	91	52.740	ENSMFAG00000002331	-	78	53.020	Macaca_fascicularis
ENSVVUG00000014628	-	91	48.630	ENSMMUG00000004018	APOBEC3C	78	47.403	Macaca_mulatta
ENSVVUG00000014628	-	91	52.740	ENSMMUG00000004017	APOBEC3F	80	53.020	Macaca_mulatta
ENSVVUG00000014628	-	91	47.973	ENSMNEG00000045196	APOBEC3C	77	48.344	Macaca_nemestrina
ENSVVUG00000014628	-	91	53.608	ENSMNEG00000043316	APOBEC3D	79	53.020	Macaca_nemestrina
ENSVVUG00000014628	-	91	50.000	ENSMLEG00000036992	APOBEC3C	77	50.336	Mandrillus_leucophaeus
ENSVVUG00000014628	-	91	48.630	ENSMLEG00000029642	APOBEC3F	77	48.993	Mandrillus_leucophaeus
ENSVVUG00000014628	-	91	44.521	ENSMICG00000042615	-	69	44.966	Microcebus_murinus
ENSVVUG00000014628	-	91	45.098	ENSMLUG00000023676	-	82	47.692	Myotis_lucifugus
ENSVVUG00000014628	-	91	51.351	ENSNLEG00000028392	APOBEC3C	77	51.656	Nomascus_leucogenys
ENSVVUG00000014628	-	88	46.610	ENSNLEG00000035811	-	77	43.836	Nomascus_leucogenys
ENSVVUG00000014628	-	89	41.259	ENSOGAG00000030300	-	72	41.781	Otolemur_garnettii
ENSVVUG00000014628	-	94	45.946	ENSOGAG00000032498	-	78	43.151	Otolemur_garnettii
ENSVVUG00000014628	-	91	41.007	ENSOGAG00000033404	-	76	41.007	Otolemur_garnettii
ENSVVUG00000014628	-	91	49.315	ENSPPAG00000014118	APOBEC3C	77	49.664	Pan_paniscus
ENSVVUG00000014628	-	94	48.649	ENSPPAG00000028218	-	77	51.333	Pan_paniscus
ENSVVUG00000014628	-	89	67.361	ENSPPRG00000003726	-	76	67.347	Panthera_pardus
ENSVVUG00000014628	-	97	48.366	ENSPTRG00000041588	APOBEC3D	80	49.689	Pan_troglodytes
ENSVVUG00000014628	-	91	51.370	ENSPTRG00000014385	APOBEC3C	80	50.000	Pan_troglodytes
ENSVVUG00000014628	-	97	51.493	ENSPANG00000010775	APOBEC3F	77	51.493	Papio_anubis
ENSVVUG00000014628	-	91	52.055	ENSPPYG00000011832	APOBEC3C	77	52.349	Pongo_abelii
ENSVVUG00000014628	-	83	47.328	ENSPCOG00000022067	-	98	47.328	Propithecus_coquereli
ENSVVUG00000014628	-	79	48.413	ENSPCOG00000018072	-	94	48.413	Propithecus_coquereli
ENSVVUG00000014628	-	76	61.111	ENSPVAG00000009461	-	50	62.162	Pteropus_vampyrus
ENSVVUG00000014628	-	91	52.027	ENSRBIG00000030834	-	80	51.235	Rhinopithecus_bieti
ENSVVUG00000014628	-	97	50.746	ENSRBIG00000030323	-	77	52.349	Rhinopithecus_bieti
ENSVVUG00000014628	-	97	51.493	ENSRBIG00000042297	-	84	51.493	Rhinopithecus_bieti
ENSVVUG00000014628	-	91	52.055	ENSRROG00000029045	APOBEC3C	77	52.349	Rhinopithecus_roxellana
ENSVVUG00000014628	-	97	51.493	ENSRROG00000029996	-	82	47.712	Rhinopithecus_roxellana
ENSVVUG00000014628	-	91	52.027	ENSRROG00000028557	-	80	51.235	Rhinopithecus_roxellana
ENSVVUG00000014628	-	91	53.425	ENSSBOG00000032780	-	78	56.667	Saimiri_boliviensis_boliviensis
ENSVVUG00000014628	-	91	62.329	ENSUAMG00000004433	-	79	62.329	Ursus_americanus
ENSVVUG00000014628	-	91	62.329	ENSUMAG00000014441	-	72	61.875	Ursus_maritimus