EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000014631 (Gene tree)
Gene ID: -
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 129396 bases
Position: chrNBDQ01000104.1:4367604-4496999
Accession: 14957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000019770	PUF	PF00806.19	2.5e-71	1	8
ENSVVUP00000019770	PUF	PF00806.19	2.5e-71	2	8
ENSVVUP00000019770	PUF	PF00806.19	2.5e-71	3	8
ENSVVUP00000019770	PUF	PF00806.19	2.5e-71	4	8
ENSVVUP00000019770	PUF	PF00806.19	2.5e-71	5	8
ENSVVUP00000019770	PUF	PF00806.19	2.5e-71	6	8
ENSVVUP00000019770	PUF	PF00806.19	2.5e-71	7	8
ENSVVUP00000019770	PUF	PF00806.19	2.5e-71	8	8
ENSVVUP00000019778	PUF	PF00806.19	3.8e-71	1	8
ENSVVUP00000019778	PUF	PF00806.19	3.8e-71	2	8
ENSVVUP00000019778	PUF	PF00806.19	3.8e-71	3	8
ENSVVUP00000019778	PUF	PF00806.19	3.8e-71	4	8
ENSVVUP00000019778	PUF	PF00806.19	3.8e-71	5	8
ENSVVUP00000019778	PUF	PF00806.19	3.8e-71	6	8
ENSVVUP00000019778	PUF	PF00806.19	3.8e-71	7	8
ENSVVUP00000019778	PUF	PF00806.19	3.8e-71	8	8
ENSVVUP00000019773	PUF	PF00806.19	4.3e-71	1	8
ENSVVUP00000019773	PUF	PF00806.19	4.3e-71	2	8
ENSVVUP00000019773	PUF	PF00806.19	4.3e-71	3	8
ENSVVUP00000019773	PUF	PF00806.19	4.3e-71	4	8
ENSVVUP00000019773	PUF	PF00806.19	4.3e-71	5	8
ENSVVUP00000019773	PUF	PF00806.19	4.3e-71	6	8
ENSVVUP00000019773	PUF	PF00806.19	4.3e-71	7	8
ENSVVUP00000019773	PUF	PF00806.19	4.3e-71	8	8
ENSVVUP00000019767	PUF	PF00806.19	8e-71	1	8
ENSVVUP00000019767	PUF	PF00806.19	8e-71	2	8
ENSVVUP00000019767	PUF	PF00806.19	8e-71	3	8
ENSVVUP00000019767	PUF	PF00806.19	8e-71	4	8
ENSVVUP00000019767	PUF	PF00806.19	8e-71	5	8
ENSVVUP00000019767	PUF	PF00806.19	8e-71	6	8
ENSVVUP00000019767	PUF	PF00806.19	8e-71	7	8
ENSVVUP00000019767	PUF	PF00806.19	8e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000026270	PUM1-201	4787	-	ENSVVUP00000019767	1189 (aa)	-	UPI00005A028D
ENSVVUT00000026279	PUM1-203	4550	-	ENSVVUP00000019773	1110 (aa)	-	-
ENSVVUT00000026290	PUM1-204	4499	-	ENSVVUP00000019778	1093 (aa)	-	-
ENSVVUT00000026275	PUM1-202	4676	-	ENSVVUP00000019770	1152 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000014631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000014631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000014631	PUM1	86	87.588	ENSVVUG00000014829	PUM2	100	77.638

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000014631	PUM1	100	99.758	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSVVUG00000014631	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSVVUG00000014631	PUM1	100	99.916	ENSAMEG00000017656	PUM1	97	100.000	Ailuropoda_melanoleuca
ENSVVUG00000014631	PUM1	100	76.330	ENSACIG00000021013	pum1	93	91.084	Amphilophus_citrinellus
ENSVVUG00000014631	PUM1	90	91.566	ENSAOCG00000003944	pum1	100	91.525	Amphiprion_ocellaris
ENSVVUG00000014631	PUM1	90	91.566	ENSAPEG00000014550	pum1	100	91.525	Amphiprion_percula
ENSVVUG00000014631	PUM1	90	91.566	ENSATEG00000016004	pum1	100	91.525	Anabas_testudineus
ENSVVUG00000014631	PUM1	100	98.792	ENSAPLG00000009351	PUM1	100	97.729	Anas_platyrhynchos
ENSVVUG00000014631	PUM1	100	99.034	ENSACAG00000000682	PUM1	98	95.711	Anolis_carolinensis
ENSVVUG00000014631	PUM1	100	99.243	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSVVUG00000014631	PUM1	90	76.667	ENSACLG00000019354	pum1	100	78.928	Astatotilapia_calliptera
ENSVVUG00000014631	PUM1	100	80.398	ENSAMXG00000020607	pum1	92	93.237	Astyanax_mexicanus
ENSVVUG00000014631	PUM1	100	99.517	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSVVUG00000014631	PUM1	100	99.758	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSVVUG00000014631	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	97.729	Canis_familiaris
ENSVVUG00000014631	PUM1	90	100.000	ENSCAFG00020024616	PUM1	99	99.336	Canis_lupus_dingo
ENSVVUG00000014631	PUM1	100	99.517	ENSCHIG00000012952	PUM1	100	100.000	Capra_hircus
ENSVVUG00000014631	PUM1	100	99.758	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSVVUG00000014631	PUM1	100	99.275	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSVVUG00000014631	PUM1	100	99.758	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSVVUG00000014631	PUM1	100	99.275	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSVVUG00000014631	PUM1	100	99.758	ENSCSAG00000001028	PUM1	100	98.583	Chlorocebus_sabaeus
ENSVVUG00000014631	PUM1	99	95.977	ENSCHOG00000010245	PUM1	93	95.977	Choloepus_hoffmanni
ENSVVUG00000014631	PUM1	100	98.792	ENSCPBG00000009288	PUM1	100	98.786	Chrysemys_picta_bellii
ENSVVUG00000014631	PUM1	100	99.758	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSVVUG00000014631	PUM1	100	98.719	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSVVUG00000014631	PUM1	100	98.785	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSVVUG00000014631	PUM1	90	76.296	ENSCSEG00000015981	pum1	93	91.084	Cynoglossus_semilaevis
ENSVVUG00000014631	PUM1	100	75.912	ENSCVAG00000007043	pum1	100	75.888	Cyprinodon_variegatus
ENSVVUG00000014631	PUM1	100	93.478	ENSDARG00000099256	pum1	95	94.408	Danio_rerio
ENSVVUG00000014631	PUM1	100	99.517	ENSDNOG00000010939	PUM1	100	99.075	Dasypus_novemcinctus
ENSVVUG00000014631	PUM1	89	98.283	ENSDORG00000001875	Pum1	100	99.272	Dipodomys_ordii
ENSVVUG00000014631	PUM1	87	95.025	ENSETEG00000004355	PUM1	87	93.659	Echinops_telfairi
ENSVVUG00000014631	PUM1	100	99.517	ENSEASG00005010813	PUM1	100	99.327	Equus_asinus_asinus
ENSVVUG00000014631	PUM1	100	99.517	ENSECAG00000021369	PUM1	100	99.327	Equus_caballus
ENSVVUG00000014631	PUM1	79	99.758	ENSEEUG00000003871	PUM1	74	99.778	Erinaceus_europaeus
ENSVVUG00000014631	PUM1	100	78.247	ENSELUG00000002409	pum1	95	93.720	Esox_lucius
ENSVVUG00000014631	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSVVUG00000014631	PUM1	100	99.034	ENSFALG00000001214	PUM1	97	96.315	Ficedula_albicollis
ENSVVUG00000014631	PUM1	100	99.270	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSVVUG00000014631	PUM1	91	91.566	ENSGMOG00000010491	pum1	94	91.084	Gadus_morhua
ENSVVUG00000014631	PUM1	100	99.034	ENSGALG00000042598	PUM1	100	98.079	Gallus_gallus
ENSVVUG00000014631	PUM1	90	87.816	ENSGAFG00000015617	pum1	100	90.799	Gambusia_affinis
ENSVVUG00000014631	PUM1	100	76.507	ENSGACG00000005717	pum1	100	76.359	Gasterosteus_aculeatus
ENSVVUG00000014631	PUM1	100	98.792	ENSGAGG00000001290	PUM1	99	98.785	Gopherus_agassizii
ENSVVUG00000014631	PUM1	100	99.758	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSVVUG00000014631	PUM1	100	76.121	ENSHBUG00000018718	pum1	100	76.301	Haplochromis_burtoni
ENSVVUG00000014631	PUM1	100	99.027	ENSHGLG00000013819	Pum1	100	98.823	Heterocephalus_glaber_female
ENSVVUG00000014631	PUM1	100	99.027	ENSHGLG00100008621	Pum1	100	98.823	Heterocephalus_glaber_male
ENSVVUG00000014631	PUM1	90	75.208	ENSHCOG00000005149	pum1	100	72.315	Hippocampus_comes
ENSVVUG00000014631	PUM1	100	78.958	ENSIPUG00000020421	pum1	93	92.512	Ictalurus_punctatus
ENSVVUG00000014631	PUM1	100	99.327	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSVVUG00000014631	PUM1	100	99.034	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSVVUG00000014631	PUM1	100	75.808	ENSKMAG00000003481	pum1	100	75.888	Kryptolebias_marmoratus
ENSVVUG00000014631	PUM1	100	92.048	ENSLBEG00000002527	pum1	94	91.566	Labrus_bergylta
ENSVVUG00000014631	PUM1	100	88.010	ENSLACG00000017188	PUM1	99	86.844	Latimeria_chalumnae
ENSVVUG00000014631	PUM1	100	96.860	ENSLOCG00000005210	pum1	95	96.860	Lepisosteus_oculatus
ENSVVUG00000014631	PUM1	100	99.275	ENSLAFG00000003178	PUM1	100	98.823	Loxodonta_africana
ENSVVUG00000014631	PUM1	100	99.758	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSVVUG00000014631	PUM1	100	99.758	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSVVUG00000014631	PUM1	100	99.758	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSVVUG00000014631	PUM1	100	99.758	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSVVUG00000014631	PUM1	100	76.225	ENSMAMG00000011606	pum1	100	76.548	Mastacembelus_armatus
ENSVVUG00000014631	PUM1	100	76.121	ENSMZEG00005005834	pum1	100	76.301	Maylandia_zebra
ENSVVUG00000014631	PUM1	100	99.034	ENSMGAG00000000724	PUM1	100	97.804	Meleagris_gallopavo
ENSVVUG00000014631	PUM1	100	99.275	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSVVUG00000014631	PUM1	100	99.517	ENSMICG00000007713	-	100	99.515	Microcebus_murinus
ENSVVUG00000014631	PUM1	100	96.486	ENSMICG00000012213	-	100	96.486	Microcebus_murinus
ENSVVUG00000014631	PUM1	100	99.034	ENSMOCG00000015463	Pum1	100	98.823	Microtus_ochrogaster
ENSVVUG00000014631	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	91.283	Mola_mola
ENSVVUG00000014631	PUM1	100	98.309	ENSMODG00000017067	PUM1	100	97.649	Monodelphis_domestica
ENSVVUG00000014631	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSVVUG00000014631	PUM1	100	99.034	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSVVUG00000014631	PUM1	100	99.275	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSVVUG00000014631	PUM1	100	99.275	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSVVUG00000014631	PUM1	100	99.275	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSVVUG00000014631	PUM1	100	99.579	ENSMPUG00000015454	PUM1	100	99.579	Mustela_putorius_furo
ENSVVUG00000014631	PUM1	100	99.517	ENSMLUG00000006490	PUM1	100	99.243	Myotis_lucifugus
ENSVVUG00000014631	PUM1	100	99.327	ENSNGAG00000002378	Pum1	100	99.327	Nannospalax_galili
ENSVVUG00000014631	PUM1	87	81.335	ENSNBRG00000010689	pum1	100	83.477	Neolamprologus_brichardi
ENSVVUG00000014631	PUM1	100	97.981	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSVVUG00000014631	PUM1	84	96.284	ENSMEUG00000000976	-	82	96.284	Notamacropus_eugenii
ENSVVUG00000014631	PUM1	84	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSVVUG00000014631	PUM1	100	99.275	ENSODEG00000003465	PUM1	100	98.823	Octodon_degus
ENSVVUG00000014631	PUM1	100	91.587	ENSONIG00000002290	pum1	93	91.325	Oreochromis_niloticus
ENSVVUG00000014631	PUM1	80	83.077	ENSOANG00000004902	-	100	77.869	Ornithorhynchus_anatinus
ENSVVUG00000014631	PUM1	100	98.738	ENSOCUG00000008641	PUM1	99	98.738	Oryctolagus_cuniculus
ENSVVUG00000014631	PUM1	100	76.972	ENSORLG00000011482	pum1	94	91.084	Oryzias_latipes
ENSVVUG00000014631	PUM1	100	77.077	ENSORLG00020019461	pum1	100	76.132	Oryzias_latipes_hni
ENSVVUG00000014631	PUM1	100	77.051	ENSORLG00015011375	pum1	100	76.214	Oryzias_latipes_hsok
ENSVVUG00000014631	PUM1	90	92.771	ENSOMEG00000009312	pum1	100	77.326	Oryzias_melastigma
ENSVVUG00000014631	PUM1	100	96.474	ENSOGAG00000011063	PUM1	100	96.474	Otolemur_garnettii
ENSVVUG00000014631	PUM1	100	99.369	ENSOARG00000001899	PUM1	100	100.000	Ovis_aries
ENSVVUG00000014631	PUM1	100	99.758	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSVVUG00000014631	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSVVUG00000014631	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSVVUG00000014631	PUM1	100	99.758	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSVVUG00000014631	PUM1	100	99.758	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSVVUG00000014631	PUM1	100	79.569	ENSPKIG00000010578	pum1	100	78.236	Paramormyrops_kingsleyae
ENSVVUG00000014631	PUM1	100	98.792	ENSPSIG00000014118	PUM1	100	97.981	Pelodiscus_sinensis
ENSVVUG00000014631	PUM1	78	91.807	ENSPMGG00000005836	pum1	100	81.929	Periophthalmus_magnuspinnatus
ENSVVUG00000014631	PUM1	100	99.275	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSVVUG00000014631	PUM1	100	98.309	ENSPCIG00000014151	PUM1	100	98.309	Phascolarctos_cinereus
ENSVVUG00000014631	PUM1	94	91.325	ENSPFOG00000007289	pum1	93	90.843	Poecilia_formosa
ENSVVUG00000014631	PUM1	100	91.325	ENSPLAG00000007256	pum1	94	90.843	Poecilia_latipinna
ENSVVUG00000014631	PUM1	90	77.440	ENSPMEG00000019543	pum1	99	78.401	Poecilia_mexicana
ENSVVUG00000014631	PUM1	100	76.642	ENSPREG00000005195	pum1	100	80.993	Poecilia_reticulata
ENSVVUG00000014631	PUM1	100	99.758	ENSPPYG00000001621	PUM1	100	97.444	Pongo_abelii
ENSVVUG00000014631	PUM1	84	99.691	ENSPCAG00000001979	PUM1	74	99.691	Procavia_capensis
ENSVVUG00000014631	PUM1	100	99.517	ENSPCOG00000004398	PUM1	100	99.515	Propithecus_coquereli
ENSVVUG00000014631	PUM1	100	97.225	ENSPVAG00000005207	PUM1	97	97.225	Pteropus_vampyrus
ENSVVUG00000014631	PUM1	100	76.225	ENSPNYG00000009518	pum1	100	81.840	Pundamilia_nyererei
ENSVVUG00000014631	PUM1	100	93.478	ENSPNAG00000026728	pum1	95	93.478	Pygocentrus_nattereri
ENSVVUG00000014631	PUM1	100	98.792	ENSRNOG00000011709	Pum1	100	98.738	Rattus_norvegicus
ENSVVUG00000014631	PUM1	100	99.758	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSVVUG00000014631	PUM1	100	99.758	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSVVUG00000014631	PUM1	100	99.758	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSVVUG00000014631	PUM1	100	98.309	ENSSHAG00000010918	PUM1	100	97.565	Sarcophilus_harrisii
ENSVVUG00000014631	PUM1	100	92.048	ENSSMAG00000010918	pum1	100	91.525	Scophthalmus_maximus
ENSVVUG00000014631	PUM1	100	76.225	ENSSDUG00000009021	pum1	100	76.631	Seriola_dumerili
ENSVVUG00000014631	PUM1	100	74.097	ENSSLDG00000009667	pum1	100	78.675	Seriola_lalandi_dorsalis
ENSVVUG00000014631	PUM1	97	98.320	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSVVUG00000014631	PUM1	100	99.034	ENSSPUG00000006267	PUM1	100	97.225	Sphenodon_punctatus
ENSVVUG00000014631	PUM1	90	91.566	ENSSPAG00000016636	pum1	100	91.084	Stegastes_partitus
ENSVVUG00000014631	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSVVUG00000014631	PUM1	100	75.912	ENSTRUG00000013121	pum1	100	83.107	Takifugu_rubripes
ENSVVUG00000014631	PUM1	100	75.833	ENSTNIG00000016983	pum1	99	76.783	Tetraodon_nigroviridis
ENSVVUG00000014631	PUM1	86	97.126	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSVVUG00000014631	PUM1	92	99.362	ENSTTRG00000007436	PUM1	90	99.362	Tursiops_truncatus
ENSVVUG00000014631	PUM1	99	99.447	ENSUAMG00000018262	-	100	99.447	Ursus_americanus
ENSVVUG00000014631	PUM1	100	99.910	ENSUMAG00000009211	PUM1	100	100.000	Ursus_maritimus
ENSVVUG00000014631	PUM1	92	100.000	ENSVPAG00000005902	PUM1	92	99.751	Vicugna_pacos
ENSVVUG00000014631	PUM1	100	89.614	ENSXETG00000012904	pum1	99	86.818	Xenopus_tropicalis
ENSVVUG00000014631	PUM1	100	75.704	ENSXMAG00000002945	pum1	100	77.950	Xiphophorus_maculatus