EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000014774 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 196424 bases
Position: chrNBDQ01000002.1:20023553-20219976
Accession: 112919526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000019992	RRM_1	PF00076.22	3e-37	1	3
ENSVVUP00000019992	RRM_1	PF00076.22	3e-37	2	3
ENSVVUP00000019992	RRM_1	PF00076.22	3e-37	3	3
ENSVVUP00000019995	RRM_1	PF00076.22	3e-37	1	3
ENSVVUP00000019995	RRM_1	PF00076.22	3e-37	2	3
ENSVVUP00000019995	RRM_1	PF00076.22	3e-37	3	3
ENSVVUP00000019997	RRM_1	PF00076.22	3.6e-37	1	3
ENSVVUP00000019997	RRM_1	PF00076.22	3.6e-37	2	3
ENSVVUP00000019997	RRM_1	PF00076.22	3.6e-37	3	3
ENSVVUP00000020000	RRM_1	PF00076.22	4.1e-37	1	3
ENSVVUP00000020000	RRM_1	PF00076.22	4.1e-37	2	3
ENSVVUP00000020000	RRM_1	PF00076.22	4.1e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000026551	RBM47-203	4707	-	ENSVVUP00000019997	622 (aa)	XP_025853797	UPI000DF69CA4
ENSVVUT00000026549	RBM47-202	4272	-	ENSVVUP00000019995	591 (aa)	XP_025853813	UPI000DF6AA5A
ENSVVUT00000026546	RBM47-201	4522	-	ENSVVUP00000019992	591 (aa)	XP_025853813	UPI000DF6AA5A
ENSVVUT00000026554	RBM47-204	4058	-	ENSVVUP00000020000	641 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000014774's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000014774's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000014774	RBM47	50	55.667	ENSVVUG00000019744	SYNCRIP	79	46.517
ENSVVUG00000014774	RBM47	73	58.036	ENSVVUG00000002504	A1CF	80	58.824
ENSVVUG00000014774	RBM47	50	56.333	ENSVVUG00000026876	HNRNPR	72	45.393
ENSVVUG00000014774	RBM47	51	73.000	ENSVVUG00000024957	RBM46	64	73.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000014774	RBM47	100	93.456	ENSG00000163694	RBM47	99	94.765	Homo_sapiens
ENSVVUG00000014774	RBM47	100	77.425	ENSAPOG00000011062	rbm47	93	85.269	Acanthochromis_polyacanthus
ENSVVUG00000014774	RBM47	100	93.802	ENSAMEG00000009672	RBM47	96	95.288	Ailuropoda_melanoleuca
ENSVVUG00000014774	RBM47	100	76.549	ENSACIG00000011531	rbm47	97	77.836	Amphilophus_citrinellus
ENSVVUG00000014774	RBM47	100	78.523	ENSAOCG00000022245	rbm47	93	85.269	Amphiprion_ocellaris
ENSVVUG00000014774	RBM47	100	78.523	ENSAPEG00000018304	rbm47	93	85.269	Amphiprion_percula
ENSVVUG00000014774	RBM47	100	76.683	ENSATEG00000018400	rbm47	94	77.875	Anabas_testudineus
ENSVVUG00000014774	RBM47	100	86.195	ENSAPLG00000013974	RBM47	96	87.719	Anas_platyrhynchos
ENSVVUG00000014774	RBM47	100	84.474	ENSACAG00000011833	RBM47	100	84.474	Anolis_carolinensis
ENSVVUG00000014774	RBM47	100	93.121	ENSANAG00000029440	RBM47	96	94.056	Aotus_nancymaae
ENSVVUG00000014774	RBM47	100	75.738	ENSACLG00000016902	rbm47	94	85.836	Astatotilapia_calliptera
ENSVVUG00000014774	RBM47	100	75.987	ENSAMXG00000021794	rbm47	94	78.049	Astyanax_mexicanus
ENSVVUG00000014774	RBM47	100	95.278	ENSBTAG00000002356	RBM47	100	95.278	Bos_taurus
ENSVVUG00000014774	RBM47	100	93.243	ENSCJAG00000019385	RBM47	96	93.892	Callithrix_jacchus
ENSVVUG00000014774	RBM47	100	98.311	ENSCAFG00000015898	RBM47	100	98.311	Canis_familiaris
ENSVVUG00000014774	RBM47	87	98.638	ENSCAFG00020010558	RBM47	94	98.408	Canis_lupus_dingo
ENSVVUG00000014774	RBM47	100	95.616	ENSCHIG00000026214	RBM47	100	95.616	Capra_hircus
ENSVVUG00000014774	RBM47	85	79.724	ENSTSYG00000033612	RBM47	93	90.265	Carlito_syrichta
ENSVVUG00000014774	RBM47	100	86.195	ENSCAPG00000008426	RBM47	89	92.000	Cavia_aperea
ENSVVUG00000014774	RBM47	100	92.256	ENSCPOG00000014100	RBM47	96	94.035	Cavia_porcellus
ENSVVUG00000014774	RBM47	100	92.905	ENSCCAG00000030129	-	96	93.717	Cebus_capucinus
ENSVVUG00000014774	RBM47	99	65.599	ENSCCAG00000024397	-	95	64.437	Cebus_capucinus
ENSVVUG00000014774	RBM47	100	93.919	ENSCATG00000042064	RBM47	96	94.718	Cercocebus_atys
ENSVVUG00000014774	RBM47	100	93.086	ENSCLAG00000001684	RBM47	96	94.728	Chinchilla_lanigera
ENSVVUG00000014774	RBM47	100	93.624	ENSCSAG00000017060	RBM47	96	94.580	Chlorocebus_sabaeus
ENSVVUG00000014774	RBM47	88	88.608	ENSCHOG00000011731	RBM47	84	89.074	Choloepus_hoffmanni
ENSVVUG00000014774	RBM47	100	88.629	ENSCPBG00000013831	RBM47	96	89.895	Chrysemys_picta_bellii
ENSVVUG00000014774	RBM47	100	93.750	ENSCANG00000019997	RBM47	96	94.542	Colobus_angolensis_palliatus
ENSVVUG00000014774	RBM47	89	87.105	ENSCGRG00001020102	-	96	72.183	Cricetulus_griseus_chok1gshd
ENSVVUG00000014774	RBM47	100	90.452	ENSCGRG00001000623	-	96	92.147	Cricetulus_griseus_chok1gshd
ENSVVUG00000014774	RBM47	89	86.579	ENSCGRG00000014760	-	96	72.183	Cricetulus_griseus_crigri
ENSVVUG00000014774	RBM47	100	89.615	ENSCGRG00000007762	-	96	91.274	Cricetulus_griseus_crigri
ENSVVUG00000014774	RBM47	100	74.624	ENSCSEG00000004545	rbm47	97	75.826	Cynoglossus_semilaevis
ENSVVUG00000014774	RBM47	96	77.661	ENSCVAG00000020144	rbm47	93	85.269	Cyprinodon_variegatus
ENSVVUG00000014774	RBM47	100	77.393	ENSDARG00000061985	rbm47	94	79.196	Danio_rerio
ENSVVUG00000014774	RBM47	100	92.736	ENSDNOG00000046854	RBM47	96	94.542	Dasypus_novemcinctus
ENSVVUG00000014774	RBM47	100	92.321	ENSDORG00000010144	Rbm47	96	93.565	Dipodomys_ordii
ENSVVUG00000014774	RBM47	96	93.241	ENSETEG00000009194	RBM47	96	93.206	Echinops_telfairi
ENSVVUG00000014774	RBM47	100	58.128	ENSEBUG00000011912	rbm47	96	60.832	Eptatretus_burgeri
ENSVVUG00000014774	RBM47	100	94.604	ENSEASG00005008443	RBM47	96	95.782	Equus_asinus_asinus
ENSVVUG00000014774	RBM47	100	94.604	ENSECAG00000004400	RBM47	96	95.782	Equus_caballus
ENSVVUG00000014774	RBM47	75	93.966	ENSEEUG00000001194	RBM47	71	96.635	Erinaceus_europaeus
ENSVVUG00000014774	RBM47	100	73.333	ENSELUG00000006148	rbm47	93	84.916	Esox_lucius
ENSVVUG00000014774	RBM47	100	94.764	ENSFCAG00000012399	RBM47	96	95.423	Felis_catus
ENSVVUG00000014774	RBM47	100	88.610	ENSFALG00000002861	RBM47	96	90.052	Ficedula_albicollis
ENSVVUG00000014774	RBM47	100	91.737	ENSFDAG00000016326	RBM47	96	92.619	Fukomys_damarensis
ENSVVUG00000014774	RBM47	100	76.884	ENSFHEG00000007938	rbm47	97	77.312	Fundulus_heteroclitus
ENSVVUG00000014774	RBM47	100	73.984	ENSGMOG00000014802	rbm47	93	76.307	Gadus_morhua
ENSVVUG00000014774	RBM47	64	89.153	ENSGALG00000014267	RBM47	94	92.090	Gallus_gallus
ENSVVUG00000014774	RBM47	64	81.963	ENSGAFG00000020571	rbm47	93	84.746	Gambusia_affinis
ENSVVUG00000014774	RBM47	100	73.486	ENSGACG00000016223	rbm47	93	83.569	Gasterosteus_aculeatus
ENSVVUG00000014774	RBM47	100	88.796	ENSGAGG00000020051	RBM47	96	90.070	Gopherus_agassizii
ENSVVUG00000014774	RBM47	100	93.919	ENSGGOG00000001367	RBM47	96	94.718	Gorilla_gorilla
ENSVVUG00000014774	RBM47	100	75.490	ENSHBUG00000003520	rbm47	94	85.836	Haplochromis_burtoni
ENSVVUG00000014774	RBM47	84	89.344	ENSHGLG00000016914	RBM47	86	93.382	Heterocephalus_glaber_female
ENSVVUG00000014774	RBM47	100	82.572	ENSHGLG00100003071	-	96	83.598	Heterocephalus_glaber_male
ENSVVUG00000014774	RBM47	100	92.047	ENSHGLG00100014028	-	96	93.474	Heterocephalus_glaber_male
ENSVVUG00000014774	RBM47	99	75.966	ENSHCOG00000002074	rbm47	93	81.501	Hippocampus_comes
ENSVVUG00000014774	RBM47	100	77.181	ENSIPUG00000004743	rbm47	97	78.596	Ictalurus_punctatus
ENSVVUG00000014774	RBM47	100	92.797	ENSSTOG00000004727	RBM47	96	94.241	Ictidomys_tridecemlineatus
ENSVVUG00000014774	RBM47	100	91.933	ENSJJAG00000013823	Rbm47	100	92.437	Jaculus_jaculus
ENSVVUG00000014774	RBM47	100	77.722	ENSKMAG00000000084	rbm47	93	84.419	Kryptolebias_marmoratus
ENSVVUG00000014774	RBM47	100	75.667	ENSLBEG00000008436	rbm47	93	81.180	Labrus_bergylta
ENSVVUG00000014774	RBM47	100	83.893	ENSLACG00000007196	RBM47	96	85.140	Latimeria_chalumnae
ENSVVUG00000014774	RBM47	100	81.376	ENSLOCG00000012966	rbm47	98	78.033	Lepisosteus_oculatus
ENSVVUG00000014774	RBM47	100	92.785	ENSLAFG00000011998	RBM47	96	93.706	Loxodonta_africana
ENSVVUG00000014774	RBM47	100	93.919	ENSMFAG00000037967	RBM47	96	94.718	Macaca_fascicularis
ENSVVUG00000014774	RBM47	100	93.624	ENSMMUG00000012036	RBM47	96	94.580	Macaca_mulatta
ENSVVUG00000014774	RBM47	100	93.750	ENSMNEG00000040774	RBM47	96	94.542	Macaca_nemestrina
ENSVVUG00000014774	RBM47	100	94.953	ENSMLEG00000041432	RBM47	97	97.270	Mandrillus_leucophaeus
ENSVVUG00000014774	RBM47	100	75.987	ENSMAMG00000019143	rbm47	93	85.552	Mastacembelus_armatus
ENSVVUG00000014774	RBM47	100	75.738	ENSMZEG00005023659	rbm47	94	77.951	Maylandia_zebra
ENSVVUG00000014774	RBM47	100	87.667	ENSMGAG00000012226	RBM47	96	89.236	Meleagris_gallopavo
ENSVVUG00000014774	RBM47	100	90.940	ENSMAUG00000006493	Rbm47	96	93.182	Mesocricetus_auratus
ENSVVUG00000014774	RBM47	100	89.527	ENSMICG00000026417	RBM47	96	93.201	Microcebus_murinus
ENSVVUG00000014774	RBM47	100	91.429	ENSMOCG00000021170	Rbm47	96	93.695	Microtus_ochrogaster
ENSVVUG00000014774	RBM47	100	76.026	ENSMMOG00000007260	rbm47	94	76.789	Mola_mola
ENSVVUG00000014774	RBM47	100	89.057	ENSMODG00000007003	RBM47	96	90.877	Monodelphis_domestica
ENSVVUG00000014774	RBM47	52	81.029	ENSMODG00000015426	-	96	79.288	Monodelphis_domestica
ENSVVUG00000014774	RBM47	100	81.926	ENSMODG00000020561	-	96	83.451	Monodelphis_domestica
ENSVVUG00000014774	RBM47	100	75.879	ENSMALG00000005167	rbm47	93	84.986	Monopterus_albus
ENSVVUG00000014774	RBM47	100	91.751	MGP_CAROLIEiJ_G0027258	Rbm47	96	93.860	Mus_caroli
ENSVVUG00000014774	RBM47	100	92.088	ENSMUSG00000070780	Rbm47	96	94.211	Mus_musculus
ENSVVUG00000014774	RBM47	100	91.919	MGP_PahariEiJ_G0017040	Rbm47	96	94.035	Mus_pahari
ENSVVUG00000014774	RBM47	100	92.061	MGP_SPRETEiJ_G0028253	Rbm47	96	94.190	Mus_spretus
ENSVVUG00000014774	RBM47	100	94.444	ENSMPUG00000006177	RBM47	97	93.607	Mustela_putorius_furo
ENSVVUG00000014774	RBM47	100	92.243	ENSMLUG00000000889	RBM47	96	92.619	Myotis_lucifugus
ENSVVUG00000014774	RBM47	100	91.611	ENSNGAG00000003325	Rbm47	96	93.357	Nannospalax_galili
ENSVVUG00000014774	RBM47	100	75.614	ENSNBRG00000015092	rbm47	94	77.990	Neolamprologus_brichardi
ENSVVUG00000014774	RBM47	100	93.750	ENSNLEG00000017151	RBM47	96	94.542	Nomascus_leucogenys
ENSVVUG00000014774	RBM47	72	85.012	ENSMEUG00000009516	-	98	85.782	Notamacropus_eugenii
ENSVVUG00000014774	RBM47	75	96.680	ENSOPRG00000016507	-	70	96.680	Ochotona_princeps
ENSVVUG00000014774	RBM47	100	93.423	ENSODEG00000004873	RBM47	96	94.903	Octodon_degus
ENSVVUG00000014774	RBM47	100	75.902	ENSONIG00000009061	rbm47	94	77.312	Oreochromis_niloticus
ENSVVUG00000014774	RBM47	100	86.409	ENSOANG00000008978	RBM47	95	89.631	Ornithorhynchus_anatinus
ENSVVUG00000014774	RBM47	100	94.932	ENSOCUG00000012034	RBM47	96	95.951	Oryctolagus_cuniculus
ENSVVUG00000014774	RBM47	100	76.087	ENSORLG00000005847	rbm47	93	83.569	Oryzias_latipes
ENSVVUG00000014774	RBM47	100	76.254	ENSORLG00020005154	rbm47	93	83.569	Oryzias_latipes_hni
ENSVVUG00000014774	RBM47	100	76.421	ENSORLG00015000066	rbm47	93	83.569	Oryzias_latipes_hsok
ENSVVUG00000014774	RBM47	100	77.722	ENSOMEG00000010730	rbm47	97	77.138	Oryzias_melastigma
ENSVVUG00000014774	RBM47	100	93.939	ENSOGAG00000029367	-	96	95.439	Otolemur_garnettii
ENSVVUG00000014774	RBM47	100	85.448	ENSOGAG00000025193	-	96	86.596	Otolemur_garnettii
ENSVVUG00000014774	RBM47	100	86.824	ENSOARG00000012711	RBM47	96	87.148	Ovis_aries
ENSVVUG00000014774	RBM47	100	93.750	ENSPPAG00000029763	RBM47	96	94.542	Pan_paniscus
ENSVVUG00000014774	RBM47	100	91.723	ENSPPRG00000012873	RBM47	96	92.254	Panthera_pardus
ENSVVUG00000014774	RBM47	85	93.200	ENSPTIG00000017046	RBM47	100	92.800	Panthera_tigris_altaica
ENSVVUG00000014774	RBM47	100	93.919	ENSPTRG00000016006	RBM47	96	94.718	Pan_troglodytes
ENSVVUG00000014774	RBM47	100	93.919	ENSPANG00000005980	RBM47	96	94.718	Papio_anubis
ENSVVUG00000014774	RBM47	96	77.583	ENSPKIG00000005037	rbm47	95	76.532	Paramormyrops_kingsleyae
ENSVVUG00000014774	RBM47	98	73.810	ENSPKIG00000013431	RBM47	92	84.986	Paramormyrops_kingsleyae
ENSVVUG00000014774	RBM47	90	89.245	ENSPSIG00000017516	RBM47	93	91.304	Pelodiscus_sinensis
ENSVVUG00000014774	RBM47	96	77.273	ENSPMGG00000018540	rbm47	97	76.573	Periophthalmus_magnuspinnatus
ENSVVUG00000014774	RBM47	100	91.443	ENSPEMG00000011088	Rbm47	96	93.706	Peromyscus_maniculatus_bairdii
ENSVVUG00000014774	RBM47	96	79.514	ENSPFOG00000007997	rbm47	94	77.951	Poecilia_formosa
ENSVVUG00000014774	RBM47	96	79.304	ENSPLAG00000002072	rbm47	97	84.986	Poecilia_latipinna
ENSVVUG00000014774	RBM47	100	77.667	ENSPMEG00000017492	rbm47	93	85.269	Poecilia_mexicana
ENSVVUG00000014774	RBM47	96	79.652	ENSPREG00000008456	rbm47	97	85.269	Poecilia_reticulata
ENSVVUG00000014774	RBM47	98	81.450	ENSPPYG00000014688	RBM47	98	81.379	Pongo_abelii
ENSVVUG00000014774	RBM47	81	94.030	ENSPCAG00000011879	RBM47	77	96.296	Procavia_capensis
ENSVVUG00000014774	RBM47	100	93.063	ENSPCOG00000023451	RBM47	96	94.533	Propithecus_coquereli
ENSVVUG00000014774	RBM47	100	92.450	ENSPVAG00000003812	RBM47	96	94.231	Pteropus_vampyrus
ENSVVUG00000014774	RBM47	100	75.204	ENSPNYG00000022868	rbm47	94	77.547	Pundamilia_nyererei
ENSVVUG00000014774	RBM47	100	76.355	ENSPNAG00000007940	rbm47	94	78.261	Pygocentrus_nattereri
ENSVVUG00000014774	RBM47	100	91.751	ENSRNOG00000002408	Rbm47	96	94.035	Rattus_norvegicus
ENSVVUG00000014774	RBM47	100	93.750	ENSRBIG00000039601	RBM47	96	94.542	Rhinopithecus_bieti
ENSVVUG00000014774	RBM47	100	93.750	ENSRROG00000044696	RBM47	96	94.542	Rhinopithecus_roxellana
ENSVVUG00000014774	RBM47	100	89.865	ENSSBOG00000028475	RBM47	95	95.887	Saimiri_boliviensis_boliviensis
ENSVVUG00000014774	RBM47	100	90.034	ENSSHAG00000017576	RBM47	96	91.373	Sarcophilus_harrisii
ENSVVUG00000014774	RBM47	100	72.968	ENSSFOG00015012445	rbm47	94	74.517	Scleropages_formosus
ENSVVUG00000014774	RBM47	97	76.817	ENSSFOG00015024101	RBM47	96	75.958	Scleropages_formosus
ENSVVUG00000014774	RBM47	100	74.713	ENSSMAG00000009744	rbm47	93	83.853	Scophthalmus_maximus
ENSVVUG00000014774	RBM47	100	77.554	ENSSDUG00000022684	rbm47	96	78.223	Seriola_dumerili
ENSVVUG00000014774	RBM47	100	77.889	ENSSLDG00000003109	rbm47	92	85.552	Seriola_lalandi_dorsalis
ENSVVUG00000014774	RBM47	85	92.667	ENSSARG00000001735	RBM47	71	95.070	Sorex_araneus
ENSVVUG00000014774	RBM47	100	85.738	ENSSPUG00000007515	RBM47	96	90.368	Sphenodon_punctatus
ENSVVUG00000014774	RBM47	100	78.057	ENSSPAG00000001257	rbm47	93	85.836	Stegastes_partitus
ENSVVUG00000014774	RBM47	100	94.098	ENSSSCG00000008796	RBM47	96	95.255	Sus_scrofa
ENSVVUG00000014774	RBM47	100	88.591	ENSTGUG00000008705	RBM47	96	90.035	Taeniopygia_guttata
ENSVVUG00000014774	RBM47	100	75.209	ENSTRUG00000014050	rbm47	98	75.218	Takifugu_rubripes
ENSVVUG00000014774	RBM47	100	75.205	ENSTNIG00000006127	rbm47	94	76.399	Tetraodon_nigroviridis
ENSVVUG00000014774	RBM47	77	89.920	ENSTBEG00000001607	RBM47	72	90.368	Tupaia_belangeri
ENSVVUG00000014774	RBM47	100	94.932	ENSTTRG00000002839	RBM47	100	94.932	Tursiops_truncatus
ENSVVUG00000014774	RBM47	100	94.949	ENSUAMG00000021346	RBM47	96	95.965	Ursus_americanus
ENSVVUG00000014774	RBM47	57	93.617	ENSVPAG00000000641	-	53	95.161	Vicugna_pacos
ENSVVUG00000014774	RBM47	100	84.848	ENSXETG00000012802	rbm47	96	86.491	Xenopus_tropicalis
ENSVVUG00000014774	RBM47	88	81.698	ENSXCOG00000000780	rbm47	97	84.703	Xiphophorus_couchianus
ENSVVUG00000014774	RBM47	100	76.549	ENSXMAG00000009874	rbm47	93	84.703	Xiphophorus_maculatus