EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000014880 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 285 bases
Position: chrNBDQ01000108.1:6898657-6898941
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000020147	LSM	PF01423.22	3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000026756	-	285	-	ENSVVUP00000020147	94 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000014880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000014880's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000014880	-	91	69.767	ENSVVUG00000020191	LSM1	65	69.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000014880	-	91	69.767	ENSG00000175324	LSM1	89	61.538	Homo_sapiens
ENSVVUG00000014880	-	86	65.432	ENSAPOG00000010833	lsm1	61	65.432	Acanthochromis_polyacanthus
ENSVVUG00000014880	-	91	69.767	ENSAMEG00000011141	LSM1	65	69.767	Ailuropoda_melanoleuca
ENSVVUG00000014880	-	100	58.511	ENSACIG00000019593	lsm1	78	58.511	Amphilophus_citrinellus
ENSVVUG00000014880	-	86	65.432	ENSAOCG00000017997	-	61	66.234	Amphiprion_ocellaris
ENSVVUG00000014880	-	86	65.432	ENSAOCG00000017096	lsm1	61	65.432	Amphiprion_ocellaris
ENSVVUG00000014880	-	86	65.432	ENSAPEG00000011669	lsm1	61	65.432	Amphiprion_percula
ENSVVUG00000014880	-	86	64.198	ENSATEG00000022266	lsm1	61	64.198	Anabas_testudineus
ENSVVUG00000014880	-	91	69.767	ENSANAG00000027785	LSM1	89	61.538	Aotus_nancymaae
ENSVVUG00000014880	-	86	64.198	ENSACLG00000011400	lsm1	61	64.198	Astatotilapia_calliptera
ENSVVUG00000014880	-	86	67.901	ENSAMXG00000005441	lsm1	61	67.901	Astyanax_mexicanus
ENSVVUG00000014880	-	91	69.767	ENSBTAG00000001612	LSM1	65	69.767	Bos_taurus
ENSVVUG00000014880	-	81	44.737	WBGene00003076	lsm-1	61	44.737	Caenorhabditis_elegans
ENSVVUG00000014880	-	91	69.767	ENSCJAG00000048015	LSM1	89	61.538	Callithrix_jacchus
ENSVVUG00000014880	-	91	69.767	ENSCAFG00000006113	LSM1	65	69.767	Canis_familiaris
ENSVVUG00000014880	-	91	69.767	ENSCAFG00020001822	LSM1	65	69.767	Canis_lupus_dingo
ENSVVUG00000014880	-	91	69.767	ENSCHIG00000013194	LSM1	65	69.767	Capra_hircus
ENSVVUG00000014880	-	91	69.767	ENSTSYG00000010394	LSM1	89	61.538	Carlito_syrichta
ENSVVUG00000014880	-	91	69.767	ENSCPOG00000032671	LSM1	65	69.767	Cavia_porcellus
ENSVVUG00000014880	-	91	69.767	ENSCCAG00000037171	LSM1	89	61.538	Cebus_capucinus
ENSVVUG00000014880	-	91	69.767	ENSCATG00000020377	LSM1	89	61.538	Cercocebus_atys
ENSVVUG00000014880	-	91	69.767	ENSCLAG00000001137	LSM1	65	69.767	Chinchilla_lanigera
ENSVVUG00000014880	-	91	69.767	ENSCSAG00000015485	LSM1	65	69.767	Chlorocebus_sabaeus
ENSVVUG00000014880	-	91	69.767	ENSCHOG00000006030	LSM1	65	69.767	Choloepus_hoffmanni
ENSVVUG00000014880	-	86	64.198	ENSCPBG00000006569	LSM1	54	64.198	Chrysemys_picta_bellii
ENSVVUG00000014880	-	85	58.750	ENSCING00000013536	-	61	58.750	Ciona_intestinalis
ENSVVUG00000014880	-	91	69.767	ENSCANG00000019173	LSM1	89	61.538	Colobus_angolensis_palliatus
ENSVVUG00000014880	-	77	68.056	ENSCGRG00001002259	-	63	68.056	Cricetulus_griseus_chok1gshd
ENSVVUG00000014880	-	91	69.767	ENSCGRG00001024560	-	65	69.767	Cricetulus_griseus_chok1gshd
ENSVVUG00000014880	-	77	68.056	ENSCGRG00000013603	-	63	68.056	Cricetulus_griseus_crigri
ENSVVUG00000014880	-	91	69.767	ENSCGRG00000006554	-	65	69.767	Cricetulus_griseus_crigri
ENSVVUG00000014880	-	87	62.195	ENSCSEG00000008319	lsm1	57	62.195	Cynoglossus_semilaevis
ENSVVUG00000014880	-	86	64.198	ENSCSEG00000010570	lsm1	56	64.198	Cynoglossus_semilaevis
ENSVVUG00000014880	-	86	62.963	ENSCVAG00000003871	lsm1	61	62.963	Cyprinodon_variegatus
ENSVVUG00000014880	-	86	67.901	ENSDARG00000043177	lsm1	61	67.901	Danio_rerio
ENSVVUG00000014880	-	91	68.605	ENSDNOG00000032911	-	65	68.605	Dasypus_novemcinctus
ENSVVUG00000014880	-	91	65.116	ENSDNOG00000030989	-	64	65.116	Dasypus_novemcinctus
ENSVVUG00000014880	-	91	69.767	ENSDNOG00000046387	-	65	69.767	Dasypus_novemcinctus
ENSVVUG00000014880	-	91	61.628	ENSDNOG00000046620	-	72	61.628	Dasypus_novemcinctus
ENSVVUG00000014880	-	91	69.767	ENSDORG00000028172	Lsm1	65	69.767	Dipodomys_ordii
ENSVVUG00000014880	-	94	48.864	FBgn0261067	LSm1	64	48.864	Drosophila_melanogaster
ENSVVUG00000014880	-	91	69.767	ENSEASG00005016677	LSM1	65	69.767	Equus_asinus_asinus
ENSVVUG00000014880	-	91	69.767	ENSECAG00000010461	LSM1	65	69.767	Equus_caballus
ENSVVUG00000014880	-	85	71.250	ENSEEUG00000015181	LSM1	81	71.250	Erinaceus_europaeus
ENSVVUG00000014880	-	86	66.667	ENSELUG00000002322	lsm1	61	66.667	Esox_lucius
ENSVVUG00000014880	-	86	69.136	ENSELUG00000023374	lsm1	61	69.136	Esox_lucius
ENSVVUG00000014880	-	91	69.767	ENSFCAG00000039335	LSM1	89	61.538	Felis_catus
ENSVVUG00000014880	-	76	69.014	ENSFALG00000006723	LSM1	60	69.014	Ficedula_albicollis
ENSVVUG00000014880	-	91	69.767	ENSFDAG00000007658	LSM1	65	69.767	Fukomys_damarensis
ENSVVUG00000014880	-	86	62.963	ENSFHEG00000009556	lsm1	61	62.963	Fundulus_heteroclitus
ENSVVUG00000014880	-	99	58.065	ENSGMOG00000016651	lsm1	65	58.065	Gadus_morhua
ENSVVUG00000014880	-	86	72.840	ENSGALG00000003245	LSM1	61	72.840	Gallus_gallus
ENSVVUG00000014880	-	86	62.963	ENSGAFG00000011355	lsm1	61	62.963	Gambusia_affinis
ENSVVUG00000014880	-	86	64.198	ENSGACG00000011763	lsm1	60	64.198	Gasterosteus_aculeatus
ENSVVUG00000014880	-	91	68.605	ENSGAGG00000024065	LSM1	65	68.605	Gopherus_agassizii
ENSVVUG00000014880	-	91	69.767	ENSGGOG00000022658	LSM1	89	61.538	Gorilla_gorilla
ENSVVUG00000014880	-	86	64.198	ENSHBUG00000010897	lsm1	61	64.198	Haplochromis_burtoni
ENSVVUG00000014880	-	91	56.977	ENSHGLG00000017574	-	63	56.977	Heterocephalus_glaber_female
ENSVVUG00000014880	-	91	69.767	ENSHGLG00000005711	LSM1	65	69.767	Heterocephalus_glaber_female
ENSVVUG00000014880	-	91	56.977	ENSHGLG00100012152	-	63	56.977	Heterocephalus_glaber_male
ENSVVUG00000014880	-	91	69.767	ENSHGLG00100017660	LSM1	65	69.767	Heterocephalus_glaber_male
ENSVVUG00000014880	-	86	64.198	ENSHCOG00000017233	lsm1	61	64.198	Hippocampus_comes
ENSVVUG00000014880	-	86	67.901	ENSIPUG00000002312	LSM1	61	67.901	Ictalurus_punctatus
ENSVVUG00000014880	-	86	70.370	ENSSTOG00000026870	LSM1	99	70.370	Ictidomys_tridecemlineatus
ENSVVUG00000014880	-	91	69.767	ENSJJAG00000014605	-	65	69.767	Jaculus_jaculus
ENSVVUG00000014880	-	86	64.198	ENSKMAG00000003016	lsm1	61	64.198	Kryptolebias_marmoratus
ENSVVUG00000014880	-	99	59.140	ENSLBEG00000022352	lsm1	67	59.140	Labrus_bergylta
ENSVVUG00000014880	-	76	66.197	ENSLACG00000010947	LSM1	59	66.197	Latimeria_chalumnae
ENSVVUG00000014880	-	86	70.370	ENSLOCG00000015149	lsm1	61	70.370	Lepisosteus_oculatus
ENSVVUG00000014880	-	91	69.767	ENSLAFG00000003534	LSM1	65	69.767	Loxodonta_africana
ENSVVUG00000014880	-	91	69.767	ENSMFAG00000032661	LSM1	89	61.538	Macaca_fascicularis
ENSVVUG00000014880	-	91	69.767	ENSMLEG00000034535	LSM1	89	61.538	Mandrillus_leucophaeus
ENSVVUG00000014880	-	86	64.198	ENSMAMG00000007464	lsm1	61	64.198	Mastacembelus_armatus
ENSVVUG00000014880	-	86	64.198	ENSMZEG00005010321	lsm1	61	64.198	Maylandia_zebra
ENSVVUG00000014880	-	86	72.840	ENSMGAG00000002125	LSM1	61	72.840	Meleagris_gallopavo
ENSVVUG00000014880	-	91	69.767	ENSMICG00000030726	LSM1	89	61.538	Microcebus_murinus
ENSVVUG00000014880	-	91	69.767	ENSMOCG00000022817	Lsm1	65	69.767	Microtus_ochrogaster
ENSVVUG00000014880	-	99	60.215	ENSMMOG00000015466	lsm1	67	60.215	Mola_mola
ENSVVUG00000014880	-	91	68.605	ENSMODG00000010732	-	65	68.605	Monodelphis_domestica
ENSVVUG00000014880	-	82	66.234	ENSMALG00000001478	lsm1	82	66.234	Monopterus_albus
ENSVVUG00000014880	-	91	69.767	MGP_CAROLIEiJ_G0030930	Lsm1	65	69.767	Mus_caroli
ENSVVUG00000014880	-	91	69.767	ENSMUSG00000037296	Lsm1	91	61.538	Mus_musculus
ENSVVUG00000014880	-	91	69.767	MGP_PahariEiJ_G0021400	Lsm1	65	69.767	Mus_pahari
ENSVVUG00000014880	-	91	69.767	MGP_SPRETEiJ_G0032049	Lsm1	65	69.767	Mus_spretus
ENSVVUG00000014880	-	91	69.767	ENSMPUG00000009883	LSM1	65	69.767	Mustela_putorius_furo
ENSVVUG00000014880	-	91	69.767	ENSMLUG00000003734	LSM1	65	69.767	Myotis_lucifugus
ENSVVUG00000014880	-	91	68.605	ENSNGAG00000003753	Lsm1	65	68.605	Nannospalax_galili
ENSVVUG00000014880	-	82	66.234	ENSNBRG00000017370	lsm1	66	66.234	Neolamprologus_brichardi
ENSVVUG00000014880	-	91	69.767	ENSNLEG00000029390	LSM1	89	61.538	Nomascus_leucogenys
ENSVVUG00000014880	-	91	68.605	ENSMEUG00000014077	LSM1	65	68.605	Notamacropus_eugenii
ENSVVUG00000014880	-	74	68.571	ENSOPRG00000000333	LSM1	60	68.571	Ochotona_princeps
ENSVVUG00000014880	-	91	69.767	ENSODEG00000004834	LSM1	65	69.767	Octodon_degus
ENSVVUG00000014880	-	86	64.198	ENSONIG00000010782	lsm1	61	64.198	Oreochromis_niloticus
ENSVVUG00000014880	-	91	68.605	ENSOANG00000003256	LSM1	65	68.605	Ornithorhynchus_anatinus
ENSVVUG00000014880	-	91	69.767	ENSOCUG00000015399	LSM1	65	69.767	Oryctolagus_cuniculus
ENSVVUG00000014880	-	86	65.432	ENSORLG00000030288	lsm1	61	65.432	Oryzias_latipes
ENSVVUG00000014880	-	86	65.432	ENSORLG00020003941	lsm1	61	65.432	Oryzias_latipes_hni
ENSVVUG00000014880	-	86	65.432	ENSORLG00020006213	-	53	65.432	Oryzias_latipes_hni
ENSVVUG00000014880	-	86	65.432	ENSORLG00015018350	lsm1	61	65.432	Oryzias_latipes_hsok
ENSVVUG00000014880	-	86	65.432	ENSOMEG00000012454	lsm1	61	65.432	Oryzias_melastigma
ENSVVUG00000014880	-	91	69.767	ENSOGAG00000015161	LSM1	65	69.767	Otolemur_garnettii
ENSVVUG00000014880	-	91	69.767	ENSOARG00000001317	LSM1	65	69.767	Ovis_aries
ENSVVUG00000014880	-	91	69.767	ENSPPAG00000032279	LSM1	89	61.538	Pan_paniscus
ENSVVUG00000014880	-	91	69.767	ENSPPRG00000014172	-	89	61.538	Panthera_pardus
ENSVVUG00000014880	-	91	69.767	ENSPTIG00000010289	LSM1	89	61.538	Panthera_tigris_altaica
ENSVVUG00000014880	-	91	69.767	ENSPTRG00000020169	LSM1	89	61.538	Pan_troglodytes
ENSVVUG00000014880	-	91	69.767	ENSPANG00000008814	LSM1	89	61.538	Papio_anubis
ENSVVUG00000014880	-	86	71.605	ENSPKIG00000001839	lsm1	61	71.605	Paramormyrops_kingsleyae
ENSVVUG00000014880	-	84	68.354	ENSPKIG00000019409	LSM1	59	68.354	Paramormyrops_kingsleyae
ENSVVUG00000014880	-	87	62.195	ENSPSIG00000012563	LSM1	62	62.195	Pelodiscus_sinensis
ENSVVUG00000014880	-	82	66.234	ENSPMGG00000022999	lsm1	73	66.234	Periophthalmus_magnuspinnatus
ENSVVUG00000014880	-	65	65.574	ENSPMAG00000002671	lsm1	54	65.574	Petromyzon_marinus
ENSVVUG00000014880	-	91	68.605	ENSPCIG00000008880	LSM1	65	68.605	Phascolarctos_cinereus
ENSVVUG00000014880	-	86	62.963	ENSPFOG00000016029	lsm1	61	62.963	Poecilia_formosa
ENSVVUG00000014880	-	86	62.963	ENSPLAG00000007879	lsm1	61	62.963	Poecilia_latipinna
ENSVVUG00000014880	-	86	62.963	ENSPMEG00000023550	lsm1	61	62.963	Poecilia_mexicana
ENSVVUG00000014880	-	86	62.963	ENSPREG00000009574	lsm1	61	62.963	Poecilia_reticulata
ENSVVUG00000014880	-	91	69.767	ENSPPYG00000018521	LSM1	65	69.767	Pongo_abelii
ENSVVUG00000014880	-	91	69.767	ENSPCOG00000020901	-	89	61.538	Propithecus_coquereli
ENSVVUG00000014880	-	91	69.767	ENSPVAG00000006016	LSM1	65	69.767	Pteropus_vampyrus
ENSVVUG00000014880	-	86	64.198	ENSPNYG00000018067	lsm1	61	64.198	Pundamilia_nyererei
ENSVVUG00000014880	-	86	67.901	ENSPNAG00000013707	lsm1	61	67.901	Pygocentrus_nattereri
ENSVVUG00000014880	-	91	68.605	ENSRNOG00000015375	Lsm1	65	68.605	Rattus_norvegicus
ENSVVUG00000014880	-	91	69.767	ENSRBIG00000027449	LSM1	89	61.538	Rhinopithecus_bieti
ENSVVUG00000014880	-	91	69.767	ENSRROG00000036074	LSM1	89	61.538	Rhinopithecus_roxellana
ENSVVUG00000014880	-	91	68.605	ENSSHAG00000017260	LSM1	65	68.605	Sarcophilus_harrisii
ENSVVUG00000014880	-	86	71.605	ENSSFOG00015019528	lsm1	61	71.605	Scleropages_formosus
ENSVVUG00000014880	-	86	64.198	ENSSMAG00000004930	lsm1	61	64.198	Scophthalmus_maximus
ENSVVUG00000014880	-	99	58.065	ENSSDUG00000021823	lsm1	67	58.065	Seriola_dumerili
ENSVVUG00000014880	-	99	58.065	ENSSLDG00000012154	lsm1	67	58.065	Seriola_lalandi_dorsalis
ENSVVUG00000014880	-	91	68.605	ENSSPUG00000014878	LSM1	65	68.605	Sphenodon_punctatus
ENSVVUG00000014880	-	86	64.198	ENSSPAG00000020548	lsm1	61	64.198	Stegastes_partitus
ENSVVUG00000014880	-	91	69.767	ENSSSCG00000039058	LSM1	65	69.767	Sus_scrofa
ENSVVUG00000014880	-	91	68.605	ENSTGUG00000004793	LSM1	65	68.605	Taeniopygia_guttata
ENSVVUG00000014880	-	86	65.432	ENSTRUG00000025239	lsm1	61	65.432	Takifugu_rubripes
ENSVVUG00000014880	-	99	59.140	ENSTNIG00000004055	lsm1	67	59.140	Tetraodon_nigroviridis
ENSVVUG00000014880	-	74	68.571	ENSTBEG00000015884	LSM1	60	68.571	Tupaia_belangeri
ENSVVUG00000014880	-	91	69.767	ENSTTRG00000004482	LSM1	65	69.767	Tursiops_truncatus
ENSVVUG00000014880	-	91	69.767	ENSUAMG00000004103	LSM1	65	69.767	Ursus_americanus
ENSVVUG00000014880	-	91	69.767	ENSUMAG00000009132	LSM1	65	69.767	Ursus_maritimus
ENSVVUG00000014880	-	82	71.429	ENSVPAG00000011593	LSM1	100	71.429	Vicugna_pacos
ENSVVUG00000014880	-	91	65.556	ENSXETG00000009004	lsm1	66	65.556	Xenopus_tropicalis
ENSVVUG00000014880	-	86	62.963	ENSXCOG00000015631	lsm1	61	62.963	Xiphophorus_couchianus
ENSVVUG00000014880	-	86	62.963	ENSXMAG00000026637	lsm1	61	62.963	Xiphophorus_maculatus