EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000014938 (Gene tree)
Gene ID: -
Gene Symbol: CSTF3
Alias: CstF-77
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 54571 bases
Position: chrNBDQ01000095.1:3030403-3084973
Accession: 2485
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000021857	Suf	PF05843.14	2.6e-84	1	1
ENSVVUP00000021986	Suf	PF05843.14	1.9e-83	1	1
ENSVVUP00000021905	Suf	PF05843.14	8.1e-83	1	1
ENSVVUP00000021921	Suf	PF05843.14	3.2e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000029084	CSTF3-203	2022	-	ENSVVUP00000021921	673 (aa)	-	-
ENSVVUT00000028998	CSTF3-201	2160	-	ENSVVUP00000021857	719 (aa)	-	-
ENSVVUT00000029167	CSTF3-204	2029	-	ENSVVUP00000021986	625 (aa)	-	UPI000056F1A5
ENSVVUT00000029062	CSTF3-202	2121	-	ENSVVUP00000021905	706 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000014938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000014938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000014938	CSTF3	100	100.000	ENSG00000176102	CSTF3	99	100.000	Homo_sapiens
ENSVVUG00000014938	CSTF3	100	91.360	ENSAPOG00000014054	cstf3	99	91.949	Acanthochromis_polyacanthus
ENSVVUG00000014938	CSTF3	100	99.840	ENSAMEG00000007187	CSTF3	99	99.722	Ailuropoda_melanoleuca
ENSVVUG00000014938	CSTF3	100	86.080	ENSACIG00000005539	cstf3	100	86.080	Amphilophus_citrinellus
ENSVVUG00000014938	CSTF3	100	91.040	ENSAOCG00000010930	cstf3	99	91.667	Amphiprion_ocellaris
ENSVVUG00000014938	CSTF3	100	91.040	ENSAPEG00000007903	cstf3	99	91.667	Amphiprion_percula
ENSVVUG00000014938	CSTF3	100	91.360	ENSATEG00000000190	cstf3	99	91.949	Anabas_testudineus
ENSVVUG00000014938	CSTF3	100	97.760	ENSAPLG00000007217	CSTF3	100	98.023	Anas_platyrhynchos
ENSVVUG00000014938	CSTF3	100	95.840	ENSACAG00000002823	CSTF3	99	96.333	Anolis_carolinensis
ENSVVUG00000014938	CSTF3	100	100.000	ENSANAG00000020699	CSTF3	100	100.000	Aotus_nancymaae
ENSVVUG00000014938	CSTF3	100	91.040	ENSACLG00000007820	cstf3	99	91.808	Astatotilapia_calliptera
ENSVVUG00000014938	CSTF3	100	92.320	ENSAMXG00000014198	cstf3	99	91.549	Astyanax_mexicanus
ENSVVUG00000014938	CSTF3	100	100.000	ENSBTAG00000008617	CSTF3	100	100.000	Bos_taurus
ENSVVUG00000014938	CSTF3	99	48.545	WBGene00006307	suf-1	99	49.313	Caenorhabditis_elegans
ENSVVUG00000014938	CSTF3	100	100.000	ENSCJAG00000005533	CSTF3	100	100.000	Callithrix_jacchus
ENSVVUG00000014938	CSTF3	100	100.000	ENSCAFG00000007264	CSTF3	99	100.000	Canis_familiaris
ENSVVUG00000014938	CSTF3	100	100.000	ENSCAFG00020002715	CSTF3	100	100.000	Canis_lupus_dingo
ENSVVUG00000014938	CSTF3	100	100.000	ENSCHIG00000016418	CSTF3	100	100.000	Capra_hircus
ENSVVUG00000014938	CSTF3	100	99.520	ENSTSYG00000000451	CSTF3	100	99.577	Carlito_syrichta
ENSVVUG00000014938	CSTF3	90	96.591	ENSCAPG00000010958	CSTF3	98	96.591	Cavia_aperea
ENSVVUG00000014938	CSTF3	100	99.680	ENSCPOG00000005545	CSTF3	99	99.718	Cavia_porcellus
ENSVVUG00000014938	CSTF3	100	100.000	ENSCCAG00000024790	CSTF3	100	100.000	Cebus_capucinus
ENSVVUG00000014938	CSTF3	100	100.000	ENSCATG00000007080	CSTF3	100	100.000	Cercocebus_atys
ENSVVUG00000014938	CSTF3	100	100.000	ENSCLAG00000016179	CSTF3	99	100.000	Chinchilla_lanigera
ENSVVUG00000014938	CSTF3	78	100.000	ENSCHOG00000002497	CSTF3	79	100.000	Choloepus_hoffmanni
ENSVVUG00000014938	CSTF3	100	97.600	ENSCPBG00000006753	CSTF3	99	97.884	Chrysemys_picta_bellii
ENSVVUG00000014938	CSTF3	100	62.243	ENSCING00000006401	-	98	62.098	Ciona_intestinalis
ENSVVUG00000014938	CSTF3	100	61.635	ENSCSAVG00000004851	-	100	61.785	Ciona_savignyi
ENSVVUG00000014938	CSTF3	100	100.000	ENSCANG00000035468	CSTF3	100	100.000	Colobus_angolensis_palliatus
ENSVVUG00000014938	CSTF3	100	99.520	ENSCGRG00001014773	Cstf3	99	99.577	Cricetulus_griseus_chok1gshd
ENSVVUG00000014938	CSTF3	100	99.520	ENSCGRG00000004142	Cstf3	99	99.577	Cricetulus_griseus_crigri
ENSVVUG00000014938	CSTF3	100	91.040	ENSCSEG00000014283	cstf3	99	91.678	Cynoglossus_semilaevis
ENSVVUG00000014938	CSTF3	100	90.240	ENSCVAG00000019739	cstf3	99	90.819	Cyprinodon_variegatus
ENSVVUG00000014938	CSTF3	100	90.720	ENSDARG00000018904	cstf3	99	91.678	Danio_rerio
ENSVVUG00000014938	CSTF3	100	99.520	ENSDNOG00000007366	CSTF3	99	99.298	Dasypus_novemcinctus
ENSVVUG00000014938	CSTF3	100	92.800	ENSDORG00000005898	Cstf3	99	92.102	Dipodomys_ordii
ENSVVUG00000014938	CSTF3	99	57.829	FBgn0003559	su(f)	98	57.025	Drosophila_melanogaster
ENSVVUG00000014938	CSTF3	96	99.331	ENSETEG00000017097	CSTF3	90	94.237	Echinops_telfairi
ENSVVUG00000014938	CSTF3	86	74.954	ENSEBUG00000015459	cstf3	96	75.421	Eptatretus_burgeri
ENSVVUG00000014938	CSTF3	100	99.840	ENSEASG00005019884	CSTF3	100	99.857	Equus_asinus_asinus
ENSVVUG00000014938	CSTF3	100	99.840	ENSECAG00000023338	CSTF3	100	99.857	Equus_caballus
ENSVVUG00000014938	CSTF3	100	93.440	ENSEEUG00000015167	CSTF3	99	94.217	Erinaceus_europaeus
ENSVVUG00000014938	CSTF3	100	89.440	ENSELUG00000023393	cstf3	99	90.409	Esox_lucius
ENSVVUG00000014938	CSTF3	100	99.840	ENSFCAG00000030711	CSTF3	99	99.859	Felis_catus
ENSVVUG00000014938	CSTF3	100	97.600	ENSFALG00000010764	CSTF3	100	96.928	Ficedula_albicollis
ENSVVUG00000014938	CSTF3	100	99.840	ENSFDAG00000012082	CSTF3	99	99.859	Fukomys_damarensis
ENSVVUG00000014938	CSTF3	100	90.400	ENSFHEG00000020623	cstf3	99	90.960	Fundulus_heteroclitus
ENSVVUG00000014938	CSTF3	100	89.457	ENSGMOG00000012275	cstf3	99	89.986	Gadus_morhua
ENSVVUG00000014938	CSTF3	100	98.240	ENSGALG00000011685	CSTF3	99	98.449	Gallus_gallus
ENSVVUG00000014938	CSTF3	100	90.720	ENSGAFG00000002181	cstf3	99	91.243	Gambusia_affinis
ENSVVUG00000014938	CSTF3	100	90.560	ENSGACG00000015997	cstf3	99	91.243	Gasterosteus_aculeatus
ENSVVUG00000014938	CSTF3	100	97.600	ENSGAGG00000006200	CSTF3	99	97.884	Gopherus_agassizii
ENSVVUG00000014938	CSTF3	100	95.040	ENSGGOG00000026591	CSTF3	99	95.429	Gorilla_gorilla
ENSVVUG00000014938	CSTF3	100	91.040	ENSHBUG00000016656	cstf3	99	91.808	Haplochromis_burtoni
ENSVVUG00000014938	CSTF3	100	99.680	ENSHGLG00000017834	CSTF3	99	99.718	Heterocephalus_glaber_female
ENSVVUG00000014938	CSTF3	100	99.680	ENSHGLG00100018042	CSTF3	100	99.579	Heterocephalus_glaber_male
ENSVVUG00000014938	CSTF3	100	90.080	ENSHCOG00000015218	cstf3	99	89.915	Hippocampus_comes
ENSVVUG00000014938	CSTF3	100	90.560	ENSIPUG00000013170	CSTF3	99	90.832	Ictalurus_punctatus
ENSVVUG00000014938	CSTF3	100	100.000	ENSSTOG00000013306	CSTF3	99	100.000	Ictidomys_tridecemlineatus
ENSVVUG00000014938	CSTF3	99	87.692	ENSJJAG00000018430	Cstf3	99	87.692	Jaculus_jaculus
ENSVVUG00000014938	CSTF3	100	90.240	ENSKMAG00000010916	cstf3	99	90.819	Kryptolebias_marmoratus
ENSVVUG00000014938	CSTF3	100	90.080	ENSLBEG00000002306	cstf3	99	90.819	Labrus_bergylta
ENSVVUG00000014938	CSTF3	100	93.920	ENSLACG00000017296	CSTF3	99	94.358	Latimeria_chalumnae
ENSVVUG00000014938	CSTF3	100	93.120	ENSLOCG00000004415	cstf3	99	93.653	Lepisosteus_oculatus
ENSVVUG00000014938	CSTF3	100	99.680	ENSLAFG00000008712	CSTF3	99	99.718	Loxodonta_africana
ENSVVUG00000014938	CSTF3	100	100.000	ENSMFAG00000029516	CSTF3	100	100.000	Macaca_fascicularis
ENSVVUG00000014938	CSTF3	100	100.000	ENSMMUG00000002542	CSTF3	99	100.000	Macaca_mulatta
ENSVVUG00000014938	CSTF3	100	100.000	ENSMNEG00000021807	CSTF3	100	100.000	Macaca_nemestrina
ENSVVUG00000014938	CSTF3	100	100.000	ENSMLEG00000039594	CSTF3	100	100.000	Mandrillus_leucophaeus
ENSVVUG00000014938	CSTF3	100	91.040	ENSMAMG00000020423	cstf3	99	91.667	Mastacembelus_armatus
ENSVVUG00000014938	CSTF3	100	91.040	ENSMZEG00005012082	cstf3	99	91.808	Maylandia_zebra
ENSVVUG00000014938	CSTF3	100	98.240	ENSMGAG00000001383	CSTF3	99	98.449	Meleagris_gallopavo
ENSVVUG00000014938	CSTF3	100	99.360	ENSMAUG00000002487	Cstf3	99	99.436	Mesocricetus_auratus
ENSVVUG00000014938	CSTF3	100	99.680	ENSMICG00000004784	CSTF3	100	99.680	Microcebus_murinus
ENSVVUG00000014938	CSTF3	100	99.520	ENSMOCG00000017583	Cstf3	99	99.577	Microtus_ochrogaster
ENSVVUG00000014938	CSTF3	100	90.720	ENSMMOG00000016026	cstf3	94	91.384	Mola_mola
ENSVVUG00000014938	CSTF3	100	84.640	ENSMODG00000025205	-	99	84.724	Monodelphis_domestica
ENSVVUG00000014938	CSTF3	100	98.720	ENSMODG00000009745	-	99	98.872	Monodelphis_domestica
ENSVVUG00000014938	CSTF3	100	90.720	ENSMALG00000012050	cstf3	99	91.384	Monopterus_albus
ENSVVUG00000014938	CSTF3	100	99.520	MGP_CAROLIEiJ_G0024026	Cstf3	99	99.577	Mus_caroli
ENSVVUG00000014938	CSTF3	100	99.520	ENSMUSG00000027176	Cstf3	99	99.577	Mus_musculus
ENSVVUG00000014938	CSTF3	100	99.520	MGP_PahariEiJ_G0025464	Cstf3	99	99.577	Mus_pahari
ENSVVUG00000014938	CSTF3	100	99.520	MGP_SPRETEiJ_G0024939	Cstf3	99	99.577	Mus_spretus
ENSVVUG00000014938	CSTF3	100	99.840	ENSMPUG00000011457	CSTF3	99	99.859	Mustela_putorius_furo
ENSVVUG00000014938	CSTF3	100	99.680	ENSMLUG00000003073	-	99	99.024	Myotis_lucifugus
ENSVVUG00000014938	CSTF3	100	96.480	ENSMLUG00000026022	-	99	96.474	Myotis_lucifugus
ENSVVUG00000014938	CSTF3	100	99.520	ENSNGAG00000010677	Cstf3	99	99.577	Nannospalax_galili
ENSVVUG00000014938	CSTF3	100	91.040	ENSNBRG00000007345	cstf3	100	91.040	Neolamprologus_brichardi
ENSVVUG00000014938	CSTF3	100	100.000	ENSNLEG00000017901	CSTF3	100	100.000	Nomascus_leucogenys
ENSVVUG00000014938	CSTF3	81	94.862	ENSMEUG00000005640	-	100	95.029	Notamacropus_eugenii
ENSVVUG00000014938	CSTF3	67	100.000	ENSOPRG00000000199	-	66	100.000	Ochotona_princeps
ENSVVUG00000014938	CSTF3	100	99.840	ENSODEG00000016737	-	100	99.858	Octodon_degus
ENSVVUG00000014938	CSTF3	99	88.871	ENSODEG00000006311	-	97	87.107	Octodon_degus
ENSVVUG00000014938	CSTF3	100	91.040	ENSONIG00000005563	cstf3	99	91.808	Oreochromis_niloticus
ENSVVUG00000014938	CSTF3	100	97.767	ENSOANG00000015140	CSTF3	100	97.077	Ornithorhynchus_anatinus
ENSVVUG00000014938	CSTF3	100	99.680	ENSOCUG00000015417	CSTF3	99	99.718	Oryctolagus_cuniculus
ENSVVUG00000014938	CSTF3	100	90.720	ENSORLG00000009762	cstf3	99	91.114	Oryzias_latipes
ENSVVUG00000014938	CSTF3	100	90.720	ENSORLG00020005540	cstf3	99	91.114	Oryzias_latipes_hni
ENSVVUG00000014938	CSTF3	100	90.560	ENSORLG00015003551	cstf3	99	91.092	Oryzias_latipes_hsok
ENSVVUG00000014938	CSTF3	100	90.080	ENSOMEG00000003848	cstf3	99	90.806	Oryzias_melastigma
ENSVVUG00000014938	CSTF3	100	99.363	ENSOGAG00000010229	CSTF3	99	99.438	Otolemur_garnettii
ENSVVUG00000014938	CSTF3	100	100.000	ENSOARG00000017271	CSTF3	99	99.844	Ovis_aries
ENSVVUG00000014938	CSTF3	100	97.600	ENSPPAG00000027358	CSTF3	99	97.714	Pan_paniscus
ENSVVUG00000014938	CSTF3	100	99.840	ENSPPRG00000016852	CSTF3	99	99.859	Panthera_pardus
ENSVVUG00000014938	CSTF3	100	99.840	ENSPTIG00000008716	CSTF3	99	99.859	Panthera_tigris_altaica
ENSVVUG00000014938	CSTF3	100	100.000	ENSPTRG00000003485	CSTF3	99	100.000	Pan_troglodytes
ENSVVUG00000014938	CSTF3	100	100.000	ENSPANG00000013722	CSTF3	99	100.000	Papio_anubis
ENSVVUG00000014938	CSTF3	100	92.160	ENSPKIG00000023648	cstf3	99	92.948	Paramormyrops_kingsleyae
ENSVVUG00000014938	CSTF3	100	97.120	ENSPSIG00000009173	CSTF3	99	97.461	Pelodiscus_sinensis
ENSVVUG00000014938	CSTF3	78	93.692	ENSPMGG00000000164	cstf3	98	95.733	Periophthalmus_magnuspinnatus
ENSVVUG00000014938	CSTF3	100	99.360	ENSPEMG00000011481	Cstf3	99	99.436	Peromyscus_maniculatus_bairdii
ENSVVUG00000014938	CSTF3	100	81.081	ENSPMAG00000007282	cstf3	99	79.887	Petromyzon_marinus
ENSVVUG00000014938	CSTF3	100	98.240	ENSPCIG00000026406	-	100	98.240	Phascolarctos_cinereus
ENSVVUG00000014938	CSTF3	100	81.310	ENSPCIG00000030419	-	89	82.113	Phascolarctos_cinereus
ENSVVUG00000014938	CSTF3	100	90.880	ENSPFOG00000017239	cstf3	99	91.384	Poecilia_formosa
ENSVVUG00000014938	CSTF3	100	90.880	ENSPLAG00000009456	cstf3	99	91.384	Poecilia_latipinna
ENSVVUG00000014938	CSTF3	100	90.880	ENSPMEG00000010320	cstf3	99	91.384	Poecilia_mexicana
ENSVVUG00000014938	CSTF3	100	90.880	ENSPREG00000013549	cstf3	99	91.384	Poecilia_reticulata
ENSVVUG00000014938	CSTF3	100	100.000	ENSPPYG00000003375	CSTF3	99	100.000	Pongo_abelii
ENSVVUG00000014938	CSTF3	70	100.000	ENSPCAG00000008025	-	70	100.000	Procavia_capensis
ENSVVUG00000014938	CSTF3	100	95.520	ENSPCOG00000014417	CSTF3	99	95.989	Propithecus_coquereli
ENSVVUG00000014938	CSTF3	100	95.520	ENSPVAG00000002350	CSTF3	99	94.499	Pteropus_vampyrus
ENSVVUG00000014938	CSTF3	100	91.040	ENSPNYG00000018259	cstf3	99	91.808	Pundamilia_nyererei
ENSVVUG00000014938	CSTF3	100	91.840	ENSPNAG00000020182	cstf3	99	92.666	Pygocentrus_nattereri
ENSVVUG00000014938	CSTF3	100	99.200	ENSRNOG00000012089	Cstf3	100	99.200	Rattus_norvegicus
ENSVVUG00000014938	CSTF3	100	100.000	ENSRBIG00000044258	CSTF3	100	100.000	Rhinopithecus_bieti
ENSVVUG00000014938	CSTF3	100	100.000	ENSRROG00000043450	CSTF3	100	100.000	Rhinopithecus_roxellana
ENSVVUG00000014938	CSTF3	100	100.000	ENSSBOG00000024764	CSTF3	100	100.000	Saimiri_boliviensis_boliviensis
ENSVVUG00000014938	CSTF3	100	85.760	ENSSHAG00000003135	-	98	86.139	Sarcophilus_harrisii
ENSVVUG00000014938	CSTF3	100	98.560	ENSSHAG00000018128	-	99	98.315	Sarcophilus_harrisii
ENSVVUG00000014938	CSTF3	100	92.000	ENSSFOG00015022133	cstf3	99	92.807	Scleropages_formosus
ENSVVUG00000014938	CSTF3	100	90.400	ENSSMAG00000002197	cstf3	99	90.960	Scophthalmus_maximus
ENSVVUG00000014938	CSTF3	100	91.200	ENSSDUG00000020426	cstf3	99	91.808	Seriola_dumerili
ENSVVUG00000014938	CSTF3	100	91.200	ENSSLDG00000025649	cstf3	99	91.808	Seriola_lalandi_dorsalis
ENSVVUG00000014938	CSTF3	100	99.680	ENSSARG00000000391	CSTF3	99	99.577	Sorex_araneus
ENSVVUG00000014938	CSTF3	100	96.800	ENSSPUG00000010546	CSTF3	100	97.106	Sphenodon_punctatus
ENSVVUG00000014938	CSTF3	100	91.200	ENSSPAG00000004958	cstf3	99	91.808	Stegastes_partitus
ENSVVUG00000014938	CSTF3	100	99.840	ENSSSCG00000040954	CSTF3	99	99.859	Sus_scrofa
ENSVVUG00000014938	CSTF3	100	97.600	ENSTGUG00000005010	CSTF3	100	97.740	Taeniopygia_guttata
ENSVVUG00000014938	CSTF3	100	89.920	ENSTRUG00000004959	cstf3	99	90.537	Takifugu_rubripes
ENSVVUG00000014938	CSTF3	100	90.400	ENSTNIG00000013811	cstf3	98	90.960	Tetraodon_nigroviridis
ENSVVUG00000014938	CSTF3	100	96.320	ENSTBEG00000001544	CSTF3	90	96.417	Tupaia_belangeri
ENSVVUG00000014938	CSTF3	100	96.480	ENSTTRG00000016366	CSTF3	99	96.897	Tursiops_truncatus
ENSVVUG00000014938	CSTF3	100	99.680	ENSUMAG00000018971	CSTF3	100	99.680	Ursus_maritimus
ENSVVUG00000014938	CSTF3	100	99.840	ENSVPAG00000007800	CSTF3	99	99.859	Vicugna_pacos
ENSVVUG00000014938	CSTF3	97	80.488	ENSXETG00000021399	cstf3	100	80.583	Xenopus_tropicalis
ENSVVUG00000014938	CSTF3	69	43.064	ENSXETG00000017946	-	99	43.685	Xenopus_tropicalis
ENSVVUG00000014938	CSTF3	100	90.400	ENSXCOG00000011741	cstf3	100	90.400	Xiphophorus_couchianus
ENSVVUG00000014938	CSTF3	100	90.880	ENSXMAG00000009545	cstf3	99	91.384	Xiphophorus_maculatus