EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000015117 (Gene tree)
Gene ID: -
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 7606 bases
Position: chrNBDQ01000081.1:4470086-4477691
Accession: 112928508
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000020545	RRM_1	PF00076.22	8.5e-18	1	1
ENSVVUP00000020543	RRM_1	PF00076.22	9.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000027250	RBM42-202	1485	XM_026010307	ENSVVUP00000020545	446 (aa)	XP_025866092	UPI000DF6B9D8
ENSVVUT00000027247	RBM42-201	1551	XM_026010306	ENSVVUP00000020543	468 (aa)	XP_025866091	-

Gene Model

Click here to download ENSVVUG00000015117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000015117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000015117	RBM42	100	98.004	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSVVUG00000015117	RBM42	100	97.077	ENSAMEG00000000524	RBM42	100	97.077	Ailuropoda_melanoleuca
ENSVVUG00000015117	RBM42	100	96.484	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSVVUG00000015117	RBM42	100	97.363	ENSBTAG00000013440	RBM42	100	97.363	Bos_taurus
ENSVVUG00000015117	RBM42	100	98.438	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSVVUG00000015117	RBM42	100	92.825	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSVVUG00000015117	RBM42	100	98.661	ENSCHIG00000009518	RBM42	100	98.661	Capra_hircus
ENSVVUG00000015117	RBM42	100	96.444	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSVVUG00000015117	RBM42	81	96.891	ENSCAPG00000009566	RBM42	99	96.891	Cavia_aperea
ENSVVUG00000015117	RBM42	100	98.214	ENSCPOG00000012365	RBM42	99	98.214	Cavia_porcellus
ENSVVUG00000015117	RBM42	100	97.065	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSVVUG00000015117	RBM42	100	97.783	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSVVUG00000015117	RBM42	100	97.545	ENSCLAG00000012865	RBM42	99	97.545	Chinchilla_lanigera
ENSVVUG00000015117	RBM42	100	97.783	ENSCSAG00000004422	RBM42	100	97.783	Chlorocebus_sabaeus
ENSVVUG00000015117	RBM42	100	86.373	ENSCANG00000030272	RBM42	100	86.583	Colobus_angolensis_palliatus
ENSVVUG00000015117	RBM42	100	96.875	ENSCGRG00001018540	Rbm42	99	96.875	Cricetulus_griseus_chok1gshd
ENSVVUG00000015117	RBM42	100	97.118	ENSDNOG00000037397	RBM42	100	97.118	Dasypus_novemcinctus
ENSVVUG00000015117	RBM42	100	96.875	ENSDORG00000013001	Rbm42	99	96.875	Dipodomys_ordii
ENSVVUG00000015117	RBM42	76	91.304	ENSETEG00000007878	RBM42	74	91.304	Echinops_telfairi
ENSVVUG00000015117	RBM42	100	98.661	ENSEASG00005001074	RBM42	100	98.661	Equus_asinus_asinus
ENSVVUG00000015117	RBM42	100	98.661	ENSECAG00000018215	RBM42	100	98.661	Equus_caballus
ENSVVUG00000015117	RBM42	100	97.694	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSVVUG00000015117	RBM42	100	96.667	ENSFDAG00000007440	RBM42	99	96.667	Fukomys_damarensis
ENSVVUG00000015117	RBM42	100	98.004	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSVVUG00000015117	RBM42	100	95.759	ENSHGLG00000008418	RBM42	99	95.759	Heterocephalus_glaber_female
ENSVVUG00000015117	RBM42	100	95.759	ENSHGLG00100018667	RBM42	99	95.759	Heterocephalus_glaber_male
ENSVVUG00000015117	RBM42	100	98.511	ENSSTOG00000013050	RBM42	100	98.511	Ictidomys_tridecemlineatus
ENSVVUG00000015117	RBM42	100	96.652	ENSJJAG00000010421	Rbm42	99	96.652	Jaculus_jaculus
ENSVVUG00000015117	RBM42	98	91.667	ENSLAFG00000014993	RBM42	99	93.920	Loxodonta_africana
ENSVVUG00000015117	RBM42	100	97.783	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSVVUG00000015117	RBM42	100	97.321	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSVVUG00000015117	RBM42	100	97.783	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSVVUG00000015117	RBM42	100	97.783	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSVVUG00000015117	RBM42	100	97.484	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSVVUG00000015117	RBM42	100	96.652	ENSMOCG00000000405	Rbm42	99	96.652	Microtus_ochrogaster
ENSVVUG00000015117	RBM42	100	97.098	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.098	Mus_caroli
ENSVVUG00000015117	RBM42	100	97.098	ENSMUSG00000036733	Rbm42	99	97.098	Mus_musculus
ENSVVUG00000015117	RBM42	100	97.098	MGP_PahariEiJ_G0012770	Rbm42	99	97.098	Mus_pahari
ENSVVUG00000015117	RBM42	100	97.098	MGP_SPRETEiJ_G0030632	Rbm42	99	97.098	Mus_spretus
ENSVVUG00000015117	RBM42	100	99.330	ENSMPUG00000006288	RBM42	100	99.330	Mustela_putorius_furo
ENSVVUG00000015117	RBM42	100	95.807	ENSMLUG00000011334	RBM42	100	95.807	Myotis_lucifugus
ENSVVUG00000015117	RBM42	100	96.429	ENSNGAG00000019698	Rbm42	99	96.429	Nannospalax_galili
ENSVVUG00000015117	RBM42	68	99.669	ENSNLEG00000011272	-	99	85.450	Nomascus_leucogenys
ENSVVUG00000015117	RBM42	96	81.996	ENSMEUG00000016300	RBM42	100	81.276	Notamacropus_eugenii
ENSVVUG00000015117	RBM42	100	93.697	ENSOPRG00000001229	RBM42	100	91.807	Ochotona_princeps
ENSVVUG00000015117	RBM42	100	97.768	ENSODEG00000013705	RBM42	99	97.768	Octodon_degus
ENSVVUG00000015117	RBM42	100	97.339	ENSOCUG00000003337	RBM42	100	97.339	Oryctolagus_cuniculus
ENSVVUG00000015117	RBM42	100	95.807	ENSOGAG00000004144	RBM42	100	95.807	Otolemur_garnettii
ENSVVUG00000015117	RBM42	98	88.437	ENSOARG00000004926	RBM42	98	91.807	Ovis_aries
ENSVVUG00000015117	RBM42	100	98.438	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSVVUG00000015117	RBM42	100	97.694	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSVVUG00000015117	RBM42	100	97.275	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSVVUG00000015117	RBM42	100	98.004	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSVVUG00000015117	RBM42	100	96.288	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSVVUG00000015117	RBM42	100	97.768	ENSPEMG00000012065	Rbm42	99	97.768	Peromyscus_maniculatus_bairdii
ENSVVUG00000015117	RBM42	100	95.670	ENSPPYG00000009871	RBM42	100	95.670	Pongo_abelii
ENSVVUG00000015117	RBM42	88	96.721	ENSPCAG00000013053	RBM42	100	81.551	Procavia_capensis
ENSVVUG00000015117	RBM42	69	98.701	ENSPCOG00000020672	RBM42	81	96.997	Propithecus_coquereli
ENSVVUG00000015117	RBM42	100	97.484	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSVVUG00000015117	RBM42	100	97.065	ENSPVAG00000012815	RBM42	100	97.065	Pteropus_vampyrus
ENSVVUG00000015117	RBM42	100	97.321	ENSRNOG00000024278	Rbm42	99	97.321	Rattus_norvegicus
ENSVVUG00000015117	RBM42	100	97.783	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSVVUG00000015117	RBM42	100	98.438	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSVVUG00000015117	RBM42	91	92.840	ENSSBOG00000030666	RBM42	100	97.537	Saimiri_boliviensis_boliviensis
ENSVVUG00000015117	RBM42	100	86.042	ENSSARG00000010724	RBM42	100	86.042	Sorex_araneus
ENSVVUG00000015117	RBM42	100	97.768	ENSSSCG00000002905	RBM42	100	97.768	Sus_scrofa
ENSVVUG00000015117	RBM42	100	98.661	ENSUAMG00000020711	RBM42	100	98.661	Ursus_americanus
ENSVVUG00000015117	RBM42	100	97.275	ENSUMAG00000020223	RBM42	100	97.275	Ursus_maritimus