EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000015578 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 13843 bases
Position: chrNBDQ01000002.1:29985471-29999313
Accession: 112920150
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000021186	SLBP_RNA_bind	PF15247.6	2.4e-29	1	1
ENSVVUP00000021176	SLBP_RNA_bind	PF15247.6	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000028106	-	1638	-	ENSVVUP00000021176	545 (aa)	-	-
ENSVVUT00000028116	-	828	-	ENSVVUP00000021186	275 (aa)	XP_025854589	UPI000DF715BA

Gene Model

Click here to download ENSVVUG00000015578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000015578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000015578	-	100	85.818	ENSG00000163950	SLBP	100	84.364	Homo_sapiens
ENSVVUG00000015578	-	83	51.012	ENSAPOG00000004953	slbp	74	55.714	Acanthochromis_polyacanthus
ENSVVUG00000015578	-	79	95.392	ENSAMEG00000016915	SLBP	100	95.392	Ailuropoda_melanoleuca
ENSVVUG00000015578	-	82	53.659	ENSACIG00000022308	slbp	79	57.212	Amphilophus_citrinellus
ENSVVUG00000015578	-	71	56.338	ENSAOCG00000024545	slbp	87	49.042	Amphiprion_ocellaris
ENSVVUG00000015578	-	84	49.425	ENSAPEG00000017629	slbp	87	48.659	Amphiprion_percula
ENSVVUG00000015578	-	84	51.341	ENSATEG00000016358	slbp	74	56.398	Anabas_testudineus
ENSVVUG00000015578	-	79	74.545	ENSAPLG00000015989	-	100	78.182	Anas_platyrhynchos
ENSVVUG00000015578	-	100	81.560	ENSANAG00000034769	SLBP	97	85.088	Aotus_nancymaae
ENSVVUG00000015578	-	82	51.200	ENSACLG00000007036	-	77	51.869	Astatotilapia_calliptera
ENSVVUG00000015578	-	71	63.184	ENSAMXG00000014527	slbp	74	63.184	Astyanax_mexicanus
ENSVVUG00000015578	-	100	86.545	ENSBTAG00000001328	SLBP	100	86.545	Bos_taurus
ENSVVUG00000015578	-	100	81.915	ENSCJAG00000001790	SLBP	100	80.851	Callithrix_jacchus
ENSVVUG00000015578	-	100	99.273	ENSCAFG00000015016	SLBP	100	99.273	Canis_familiaris
ENSVVUG00000015578	-	100	99.273	ENSCAFG00020012334	SLBP	100	99.273	Canis_lupus_dingo
ENSVVUG00000015578	-	100	87.273	ENSCHIG00000019364	SLBP	100	87.273	Capra_hircus
ENSVVUG00000015578	-	100	85.455	ENSTSYG00000000376	SLBP	100	84.364	Carlito_syrichta
ENSVVUG00000015578	-	66	87.293	ENSCAPG00000016340	SLBP	100	87.293	Cavia_aperea
ENSVVUG00000015578	-	100	83.513	ENSCPOG00000000031	SLBP	100	83.513	Cavia_porcellus
ENSVVUG00000015578	-	55	85.714	ENSCCAG00000026134	SLBP	77	81.905	Cebus_capucinus
ENSVVUG00000015578	-	100	85.818	ENSCATG00000029173	SLBP	100	84.364	Cercocebus_atys
ENSVVUG00000015578	-	100	85.455	ENSCLAG00000008157	SLBP	100	85.455	Chinchilla_lanigera
ENSVVUG00000015578	-	100	71.071	ENSCSAG00000015628	SLBP	100	69.718	Chlorocebus_sabaeus
ENSVVUG00000015578	-	100	71.986	ENSCPBG00000000746	SLBP	100	71.831	Chrysemys_picta_bellii
ENSVVUG00000015578	-	79	90.278	ENSCANG00000041008	SLBP	100	88.426	Colobus_angolensis_palliatus
ENSVVUG00000015578	-	100	85.455	ENSCGRG00001009760	-	100	85.455	Cricetulus_griseus_chok1gshd
ENSVVUG00000015578	-	100	83.636	ENSCGRG00001012991	-	100	83.636	Cricetulus_griseus_chok1gshd
ENSVVUG00000015578	-	100	85.455	ENSCGRG00000004506	Slbp	100	85.455	Cricetulus_griseus_crigri
ENSVVUG00000015578	-	83	52.590	ENSCSEG00000020337	-	89	52.227	Cynoglossus_semilaevis
ENSVVUG00000015578	-	71	58.654	ENSCVAG00000019592	-	76	57.971	Cyprinodon_variegatus
ENSVVUG00000015578	-	83	53.086	ENSDARG00000100558	slbp	66	63.000	Danio_rerio
ENSVVUG00000015578	-	100	78.799	ENSDNOG00000047539	SLBP	100	78.799	Dasypus_novemcinctus
ENSVVUG00000015578	-	79	90.741	ENSDORG00000003028	Slbp	100	90.741	Dipodomys_ordii
ENSVVUG00000015578	-	78	79.358	ENSETEG00000004641	SLBP	93	79.372	Echinops_telfairi
ENSVVUG00000015578	-	70	92.188	ENSEASG00005022714	SLBP	100	92.188	Equus_asinus_asinus
ENSVVUG00000015578	-	77	90.047	ENSECAG00000011689	SLBP	69	90.047	Equus_caballus
ENSVVUG00000015578	-	84	48.810	ENSELUG00000012854	slbp	99	48.913	Esox_lucius
ENSVVUG00000015578	-	100	94.545	ENSFCAG00000000169	SLBP	100	94.545	Felis_catus
ENSVVUG00000015578	-	100	69.039	ENSFALG00000010003	-	100	68.327	Ficedula_albicollis
ENSVVUG00000015578	-	92	87.008	ENSFDAG00000007592	SLBP	99	87.008	Fukomys_damarensis
ENSVVUG00000015578	-	82	47.521	ENSFHEG00000007497	slbp	76	51.220	Fundulus_heteroclitus
ENSVVUG00000015578	-	53	70.667	ENSGMOG00000015352	slbp	96	70.667	Gadus_morhua
ENSVVUG00000015578	-	100	71.174	ENSGALG00000015712	SLBP	100	70.463	Gallus_gallus
ENSVVUG00000015578	-	82	51.613	ENSGAFG00000019577	slbp	76	56.500	Gambusia_affinis
ENSVVUG00000015578	-	74	54.167	ENSGACG00000019596	slbp	86	53.521	Gasterosteus_aculeatus
ENSVVUG00000015578	-	86	71.311	ENSGAGG00000012096	SLBP	90	72.566	Gopherus_agassizii
ENSVVUG00000015578	-	100	85.818	ENSGGOG00000003167	SLBP	100	84.364	Gorilla_gorilla
ENSVVUG00000015578	-	82	52.174	ENSHBUG00000003338	-	77	51.869	Haplochromis_burtoni
ENSVVUG00000015578	-	100	75.636	ENSHGLG00000005955	-	100	75.636	Heterocephalus_glaber_female
ENSVVUG00000015578	-	85	79.060	ENSHGLG00000010461	-	98	77.519	Heterocephalus_glaber_female
ENSVVUG00000015578	-	90	75.904	ENSHGLG00000008313	-	100	73.188	Heterocephalus_glaber_female
ENSVVUG00000015578	-	85	79.060	ENSHGLG00100014906	-	98	77.519	Heterocephalus_glaber_male
ENSVVUG00000015578	-	100	85.091	ENSHGLG00100014018	-	100	85.091	Heterocephalus_glaber_male
ENSVVUG00000015578	-	90	76.707	ENSHGLG00100010510	-	100	73.913	Heterocephalus_glaber_male
ENSVVUG00000015578	-	84	50.593	ENSHCOG00000013425	slbp	71	57.868	Hippocampus_comes
ENSVVUG00000015578	-	70	63.776	ENSIPUG00000016780	slbp	74	63.776	Ictalurus_punctatus
ENSVVUG00000015578	-	100	89.091	ENSSTOG00000003262	SLBP	100	89.091	Ictidomys_tridecemlineatus
ENSVVUG00000015578	-	100	82.545	ENSJJAG00000002394	-	100	82.545	Jaculus_jaculus
ENSVVUG00000015578	-	100	85.818	ENSJJAG00000020549	-	100	85.818	Jaculus_jaculus
ENSVVUG00000015578	-	71	55.140	ENSKMAG00000008187	slbp	80	53.097	Kryptolebias_marmoratus
ENSVVUG00000015578	-	84	52.941	ENSLBEG00000024709	slbp	71	55.838	Labrus_bergylta
ENSVVUG00000015578	-	95	53.448	ENSLACG00000014623	SLBP	97	52.595	Latimeria_chalumnae
ENSVVUG00000015578	-	92	50.000	ENSLOCG00000011027	slbp	92	52.708	Lepisosteus_oculatus
ENSVVUG00000015578	-	79	81.982	ENSLAFG00000012933	SLBP	93	84.000	Loxodonta_africana
ENSVVUG00000015578	-	91	86.853	ENSMFAG00000030130	SLBP	95	72.374	Macaca_fascicularis
ENSVVUG00000015578	-	93	84.351	ENSMMUG00000032303	SLBP	96	88.940	Macaca_mulatta
ENSVVUG00000015578	-	100	66.312	ENSMNEG00000008082	SLBP	100	64.894	Macaca_nemestrina
ENSVVUG00000015578	-	89	83.673	ENSMLEG00000024639	SLBP	97	81.707	Mandrillus_leucophaeus
ENSVVUG00000015578	-	85	48.846	ENSMAMG00000001046	-	80	52.632	Mastacembelus_armatus
ENSVVUG00000015578	-	82	52.174	ENSMZEG00005017261	-	77	51.869	Maylandia_zebra
ENSVVUG00000015578	-	79	77.880	ENSMGAG00000013085	SLBP	100	76.959	Meleagris_gallopavo
ENSVVUG00000015578	-	100	86.545	ENSMAUG00000009490	Slbp	100	86.545	Mesocricetus_auratus
ENSVVUG00000015578	-	100	85.091	ENSMICG00000014244	SLBP	100	84.727	Microcebus_murinus
ENSVVUG00000015578	-	100	85.818	ENSMOCG00000015826	Slbp	99	86.256	Microtus_ochrogaster
ENSVVUG00000015578	-	66	60.847	ENSMMOG00000010181	slbp	80	57.292	Mola_mola
ENSVVUG00000015578	-	93	79.310	ENSMODG00000004304	SLBP	100	79.310	Monodelphis_domestica
ENSVVUG00000015578	-	84	49.425	ENSMALG00000013883	-	54	56.398	Monopterus_albus
ENSVVUG00000015578	-	100	87.273	MGP_CAROLIEiJ_G0027117	Slbp	100	87.273	Mus_caroli
ENSVVUG00000015578	-	100	87.636	ENSMUSG00000004642	Slbp	100	87.636	Mus_musculus
ENSVVUG00000015578	-	100	87.636	MGP_PahariEiJ_G0016901	Slbp	100	87.636	Mus_pahari
ENSVVUG00000015578	-	100	87.636	MGP_SPRETEiJ_G0028113	Slbp	100	87.636	Mus_spretus
ENSVVUG00000015578	-	67	94.565	ENSMPUG00000011139	SLBP	94	94.565	Mustela_putorius_furo
ENSVVUG00000015578	-	79	88.991	ENSMLUG00000004425	SLBP	93	88.991	Myotis_lucifugus
ENSVVUG00000015578	-	100	85.091	ENSNGAG00000020799	Slbp	100	85.091	Nannospalax_galili
ENSVVUG00000015578	-	76	53.043	ENSNBRG00000006044	-	85	52.863	Neolamprologus_brichardi
ENSVVUG00000015578	-	100	83.688	ENSNLEG00000000048	SLBP	100	82.270	Nomascus_leucogenys
ENSVVUG00000015578	-	65	88.202	ENSMEUG00000002501	SLBP	100	88.202	Notamacropus_eugenii
ENSVVUG00000015578	-	100	84.000	ENSODEG00000012641	SLBP	100	84.000	Octodon_degus
ENSVVUG00000015578	-	82	52.964	ENSONIG00000017469	-	77	53.271	Oreochromis_niloticus
ENSVVUG00000015578	-	79	85.253	ENSOANG00000014243	SLBP	95	85.253	Ornithorhynchus_anatinus
ENSVVUG00000015578	-	71	57.426	ENSORLG00000024887	-	74	54.040	Oryzias_latipes
ENSVVUG00000015578	-	71	57.921	ENSORLG00020007798	slbp	73	54.545	Oryzias_latipes_hni
ENSVVUG00000015578	-	71	57.426	ENSORLG00015016656	slbp	73	54.040	Oryzias_latipes_hsok
ENSVVUG00000015578	-	83	50.826	ENSOMEG00000010818	slbp	73	56.281	Oryzias_melastigma
ENSVVUG00000015578	-	100	85.818	ENSOGAG00000009750	SLBP	100	85.455	Otolemur_garnettii
ENSVVUG00000015578	-	79	90.783	ENSOARG00000016090	SLBP	100	90.783	Ovis_aries
ENSVVUG00000015578	-	100	85.455	ENSPPAG00000033300	SLBP	100	84.000	Pan_paniscus
ENSVVUG00000015578	-	91	94.000	ENSPPRG00000016897	SLBP	100	94.000	Panthera_pardus
ENSVVUG00000015578	-	70	95.312	ENSPTIG00000015057	SLBP	100	95.312	Panthera_tigris_altaica
ENSVVUG00000015578	-	100	85.091	ENSPTRG00000015832	SLBP	100	83.636	Pan_troglodytes
ENSVVUG00000015578	-	100	81.690	ENSPANG00000004932	SLBP	92	88.940	Papio_anubis
ENSVVUG00000015578	-	88	49.807	ENSPKIG00000006183	slbp	92	52.222	Paramormyrops_kingsleyae
ENSVVUG00000015578	-	65	56.410	ENSPMGG00000017684	-	96	53.093	Periophthalmus_magnuspinnatus
ENSVVUG00000015578	-	100	86.182	ENSPEMG00000018369	Slbp	100	86.182	Peromyscus_maniculatus_bairdii
ENSVVUG00000015578	-	100	74.576	ENSPCIG00000013575	SLBP	86	74.576	Phascolarctos_cinereus
ENSVVUG00000015578	-	82	51.210	ENSPFOG00000000462	slbp	72	56.500	Poecilia_formosa
ENSVVUG00000015578	-	82	50.806	ENSPLAG00000008300	slbp	76	56.650	Poecilia_latipinna
ENSVVUG00000015578	-	82	51.210	ENSPMEG00000020807	slbp	72	56.500	Poecilia_mexicana
ENSVVUG00000015578	-	82	51.210	ENSPREG00000004561	slbp	72	56.500	Poecilia_reticulata
ENSVVUG00000015578	-	100	85.091	ENSPPYG00000014529	SLBP	100	83.636	Pongo_abelii
ENSVVUG00000015578	-	100	85.455	ENSPCOG00000017399	SLBP	100	85.091	Propithecus_coquereli
ENSVVUG00000015578	-	100	81.818	ENSPVAG00000002807	SLBP	100	81.818	Pteropus_vampyrus
ENSVVUG00000015578	-	82	52.174	ENSPNYG00000005451	-	77	51.869	Pundamilia_nyererei
ENSVVUG00000015578	-	82	56.667	ENSPNAG00000018503	slbp	75	62.687	Pygocentrus_nattereri
ENSVVUG00000015578	-	100	86.909	ENSRNOG00000037162	Slbp	100	86.909	Rattus_norvegicus
ENSVVUG00000015578	-	100	85.818	ENSRBIG00000039159	SLBP	100	84.364	Rhinopithecus_bieti
ENSVVUG00000015578	-	96	85.606	ENSRROG00000030081	SLBP	99	83.083	Rhinopithecus_roxellana
ENSVVUG00000015578	-	70	89.062	ENSSBOG00000033897	SLBP	100	86.979	Saimiri_boliviensis_boliviensis
ENSVVUG00000015578	-	100	74.074	ENSSHAG00000013939	SLBP	100	74.074	Sarcophilus_harrisii
ENSVVUG00000015578	-	85	55.200	ENSSFOG00015019429	slbp	89	55.200	Scleropages_formosus
ENSVVUG00000015578	-	69	54.976	ENSSMAG00000016028	-	73	54.808	Scophthalmus_maximus
ENSVVUG00000015578	-	83	52.697	ENSSDUG00000000855	-	76	56.190	Seriola_dumerili
ENSVVUG00000015578	-	50	53.691	ENSSLDG00000022893	-	86	53.425	Seriola_lalandi_dorsalis
ENSVVUG00000015578	-	71	39.713	ENSSLDG00000007554	-	65	39.713	Seriola_lalandi_dorsalis
ENSVVUG00000015578	-	92	68.235	ENSSPUG00000016007	SLBP	96	67.323	Sphenodon_punctatus
ENSVVUG00000015578	-	85	51.128	ENSSPAG00000004021	slbp	86	56.054	Stegastes_partitus
ENSVVUG00000015578	-	100	88.727	ENSSSCG00000008676	SLBP	100	88.727	Sus_scrofa
ENSVVUG00000015578	-	93	70.881	ENSTGUG00000010626	-	100	69.349	Taeniopygia_guttata
ENSVVUG00000015578	-	85	51.172	ENSTRUG00000000688	slbp	74	54.146	Takifugu_rubripes
ENSVVUG00000015578	-	83	49.590	ENSTNIG00000000484	-	77	51.020	Tetraodon_nigroviridis
ENSVVUG00000015578	-	92	67.589	ENSTBEG00000004085	SLBP	99	67.589	Tupaia_belangeri
ENSVVUG00000015578	-	79	92.593	ENSTTRG00000010901	-	100	92.593	Tursiops_truncatus
ENSVVUG00000015578	-	65	87.079	ENSTTRG00000004010	-	100	87.079	Tursiops_truncatus
ENSVVUG00000015578	-	100	92.058	ENSUAMG00000012990	SLBP	100	92.058	Ursus_americanus
ENSVVUG00000015578	-	70	94.271	ENSUMAG00000006119	SLBP	100	94.271	Ursus_maritimus
ENSVVUG00000015578	-	91	59.144	ENSXETG00000003876	slbp	94	60.078	Xenopus_tropicalis
ENSVVUG00000015578	-	71	55.981	ENSXCOG00000008275	slbp	76	55.825	Xiphophorus_couchianus
ENSVVUG00000015578	-	82	51.210	ENSXMAG00000001331	-	71	56.500	Xiphophorus_maculatus