EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000016478 (Gene tree)
Gene ID: -
Gene Symbol: SBDS
Alias: CGI-97|FLJ10917|SDS|SWDS
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 6578 bases
Position: chrNBDQ01000136.1:4503181-4509758
Accession: 112934120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000022416	SBDS	PF01172.18	9.7e-33	1	1
ENSVVUP00000022416	SBDS_C	PF09377.10	8.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000029699	SBDS-201	1331	-	ENSVVUP00000022416	250 (aa)	XP_025873294	UPI00004C04DC

Gene Model

Click here to download ENSVVUG00000016478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000016478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000016478	SBDS	100	99.200	ENSG00000126524	SBDS	100	99.200	Homo_sapiens
ENSVVUG00000016478	SBDS	99	83.133	ENSAPOG00000014285	sbds	100	83.133	Acanthochromis_polyacanthus
ENSVVUG00000016478	SBDS	100	99.600	ENSAMEG00000018167	SBDS	100	99.600	Ailuropoda_melanoleuca
ENSVVUG00000016478	SBDS	99	82.540	ENSACIG00000007308	sbds	100	82.540	Amphilophus_citrinellus
ENSVVUG00000016478	SBDS	99	83.133	ENSAOCG00000016770	sbds	100	83.133	Amphiprion_ocellaris
ENSVVUG00000016478	SBDS	99	83.534	ENSAPEG00000015897	sbds	100	83.534	Amphiprion_percula
ENSVVUG00000016478	SBDS	99	83.534	ENSATEG00000006901	sbds	100	83.534	Anabas_testudineus
ENSVVUG00000016478	SBDS	92	91.775	ENSANAG00000024342	-	97	91.775	Aotus_nancymaae
ENSVVUG00000016478	SBDS	83	98.551	ENSANAG00000037501	-	100	98.551	Aotus_nancymaae
ENSVVUG00000016478	SBDS	99	83.936	ENSACLG00000018750	sbds	100	83.936	Astatotilapia_calliptera
ENSVVUG00000016478	SBDS	100	84.800	ENSAMXG00000005361	sbds	100	84.800	Astyanax_mexicanus
ENSVVUG00000016478	SBDS	100	98.000	ENSBTAG00000004051	SBDS	100	98.000	Bos_taurus
ENSVVUG00000016478	SBDS	98	56.504	WBGene00021063	sbds-1	97	56.504	Caenorhabditis_elegans
ENSVVUG00000016478	SBDS	100	98.000	ENSCJAG00000041007	SBDS	100	98.000	Callithrix_jacchus
ENSVVUG00000016478	SBDS	100	97.619	ENSCAFG00000010797	SBDS	100	97.619	Canis_familiaris
ENSVVUG00000016478	SBDS	100	100.000	ENSCAFG00020005357	SBDS	100	100.000	Canis_lupus_dingo
ENSVVUG00000016478	SBDS	100	98.800	ENSCHIG00000026854	SBDS	100	98.800	Capra_hircus
ENSVVUG00000016478	SBDS	100	99.200	ENSTSYG00000033822	SBDS	100	99.200	Carlito_syrichta
ENSVVUG00000016478	SBDS	66	96.341	ENSCAPG00000006634	SBDS	100	96.341	Cavia_aperea
ENSVVUG00000016478	SBDS	100	97.600	ENSCPOG00000036143	SBDS	100	97.600	Cavia_porcellus
ENSVVUG00000016478	SBDS	100	98.800	ENSCCAG00000020671	SBDS	100	98.800	Cebus_capucinus
ENSVVUG00000016478	SBDS	100	99.200	ENSCATG00000039026	SBDS	100	99.200	Cercocebus_atys
ENSVVUG00000016478	SBDS	100	97.200	ENSCLAG00000005721	-	100	97.200	Chinchilla_lanigera
ENSVVUG00000016478	SBDS	99	70.161	ENSCLAG00000002113	-	99	70.161	Chinchilla_lanigera
ENSVVUG00000016478	SBDS	100	99.200	ENSCSAG00000018275	SBDS	100	99.200	Chlorocebus_sabaeus
ENSVVUG00000016478	SBDS	100	93.600	ENSCHOG00000003795	SBDS	100	93.600	Choloepus_hoffmanni
ENSVVUG00000016478	SBDS	100	89.600	ENSCPBG00000014893	SBDS	100	89.600	Chrysemys_picta_bellii
ENSVVUG00000016478	SBDS	99	66.800	ENSCSAVG00000011811	-	100	66.800	Ciona_savignyi
ENSVVUG00000016478	SBDS	100	98.800	ENSCANG00000032368	SBDS	100	98.800	Colobus_angolensis_palliatus
ENSVVUG00000016478	SBDS	66	93.902	ENSCGRG00001019886	Sbds	100	93.902	Cricetulus_griseus_chok1gshd
ENSVVUG00000016478	SBDS	83	95.169	ENSCGRG00000009211	Sbds	100	95.169	Cricetulus_griseus_crigri
ENSVVUG00000016478	SBDS	99	81.526	ENSCSEG00000005798	sbds	100	81.526	Cynoglossus_semilaevis
ENSVVUG00000016478	SBDS	99	81.526	ENSCVAG00000001053	sbds	100	81.526	Cyprinodon_variegatus
ENSVVUG00000016478	SBDS	100	84.400	ENSDARG00000027803	sbds	100	84.400	Danio_rerio
ENSVVUG00000016478	SBDS	100	98.000	ENSDNOG00000041174	SBDS	100	98.000	Dasypus_novemcinctus
ENSVVUG00000016478	SBDS	100	95.200	ENSDORG00000026218	Sbds	100	95.200	Dipodomys_ordii
ENSVVUG00000016478	SBDS	90	58.772	FBgn0035714	CG8549	99	59.036	Drosophila_melanogaster
ENSVVUG00000016478	SBDS	93	57.940	ENSEBUG00000015780	sbds	92	63.768	Eptatretus_burgeri
ENSVVUG00000016478	SBDS	100	98.800	ENSEASG00005008821	SBDS	100	98.800	Equus_asinus_asinus
ENSVVUG00000016478	SBDS	100	98.800	ENSECAG00000008202	SBDS	100	98.800	Equus_caballus
ENSVVUG00000016478	SBDS	83	75.962	ENSEEUG00000004768	SBDS	100	75.962	Erinaceus_europaeus
ENSVVUG00000016478	SBDS	100	82.000	ENSELUG00000008382	sbds	100	82.000	Esox_lucius
ENSVVUG00000016478	SBDS	100	99.200	ENSFCAG00000022142	SBDS	100	99.200	Felis_catus
ENSVVUG00000016478	SBDS	100	89.200	ENSFALG00000013808	SBDS	100	89.200	Ficedula_albicollis
ENSVVUG00000016478	SBDS	100	97.600	ENSFDAG00000018947	-	100	97.600	Fukomys_damarensis
ENSVVUG00000016478	SBDS	99	78.313	ENSFHEG00000000708	sbds	100	78.313	Fundulus_heteroclitus
ENSVVUG00000016478	SBDS	100	84.000	ENSGMOG00000018356	sbds	99	84.000	Gadus_morhua
ENSVVUG00000016478	SBDS	100	89.200	ENSGALG00000027989	SBDS	100	89.200	Gallus_gallus
ENSVVUG00000016478	SBDS	92	78.261	ENSGAFG00000014204	sbds	100	78.261	Gambusia_affinis
ENSVVUG00000016478	SBDS	99	82.329	ENSGACG00000012697	sbds	100	82.329	Gasterosteus_aculeatus
ENSVVUG00000016478	SBDS	86	89.720	ENSGAGG00000022402	SBDS	100	89.720	Gopherus_agassizii
ENSVVUG00000016478	SBDS	96	78.838	ENSGGOG00000040023	-	92	78.838	Gorilla_gorilla
ENSVVUG00000016478	SBDS	99	83.936	ENSHBUG00000002660	sbds	100	83.936	Haplochromis_burtoni
ENSVVUG00000016478	SBDS	100	96.000	ENSHGLG00000009671	SBDS	100	96.000	Heterocephalus_glaber_female
ENSVVUG00000016478	SBDS	100	96.000	ENSHGLG00100011332	SBDS	100	96.000	Heterocephalus_glaber_male
ENSVVUG00000016478	SBDS	99	82.329	ENSHCOG00000018606	sbds	100	82.329	Hippocampus_comes
ENSVVUG00000016478	SBDS	100	85.200	ENSIPUG00000006536	sbds	100	85.200	Ictalurus_punctatus
ENSVVUG00000016478	SBDS	100	93.600	ENSJJAG00000012033	-	100	93.600	Jaculus_jaculus
ENSVVUG00000016478	SBDS	100	69.565	ENSJJAG00000003934	-	100	69.565	Jaculus_jaculus
ENSVVUG00000016478	SBDS	99	84.337	ENSKMAG00000018542	sbds	100	84.337	Kryptolebias_marmoratus
ENSVVUG00000016478	SBDS	99	80.723	ENSLBEG00000016687	sbds	100	80.723	Labrus_bergylta
ENSVVUG00000016478	SBDS	100	69.685	ENSLACG00000018916	SBDS	100	69.685	Latimeria_chalumnae
ENSVVUG00000016478	SBDS	100	87.600	ENSLOCG00000004073	sbds	100	87.600	Lepisosteus_oculatus
ENSVVUG00000016478	SBDS	100	98.000	ENSLAFG00000008763	SBDS	100	98.000	Loxodonta_africana
ENSVVUG00000016478	SBDS	100	99.200	ENSMFAG00000032620	SBDS	100	99.200	Macaca_fascicularis
ENSVVUG00000016478	SBDS	100	99.200	ENSMMUG00000045653	SBDS	100	99.200	Macaca_mulatta
ENSVVUG00000016478	SBDS	100	99.200	ENSMNEG00000031523	SBDS	100	99.200	Macaca_nemestrina
ENSVVUG00000016478	SBDS	100	75.197	ENSMLEG00000036826	SBDS	100	75.197	Mandrillus_leucophaeus
ENSVVUG00000016478	SBDS	99	83.133	ENSMAMG00000016062	sbds	100	83.133	Mastacembelus_armatus
ENSVVUG00000016478	SBDS	99	83.936	ENSMZEG00005024385	sbds	100	83.936	Maylandia_zebra
ENSVVUG00000016478	SBDS	100	89.200	ENSMGAG00000002119	SBDS	100	89.200	Meleagris_gallopavo
ENSVVUG00000016478	SBDS	99	77.108	ENSMAUG00000022214	-	100	77.108	Mesocricetus_auratus
ENSVVUG00000016478	SBDS	100	98.400	ENSMICG00000014366	SBDS	100	98.400	Microcebus_murinus
ENSVVUG00000016478	SBDS	100	96.800	ENSMOCG00000011739	Sbds	100	96.800	Microtus_ochrogaster
ENSVVUG00000016478	SBDS	99	73.600	ENSMMOG00000005061	sbds	100	73.200	Mola_mola
ENSVVUG00000016478	SBDS	100	96.000	ENSMODG00000006644	SBDS	100	96.000	Monodelphis_domestica
ENSVVUG00000016478	SBDS	99	83.133	ENSMALG00000010219	sbds	100	83.133	Monopterus_albus
ENSVVUG00000016478	SBDS	100	96.800	MGP_CAROLIEiJ_G0027800	Sbds	100	97.674	Mus_caroli
ENSVVUG00000016478	SBDS	100	96.400	ENSMUSG00000025337	Sbds	100	97.674	Mus_musculus
ENSVVUG00000016478	SBDS	100	96.400	MGP_PahariEiJ_G0024384	Sbds	100	97.674	Mus_pahari
ENSVVUG00000016478	SBDS	100	96.400	MGP_SPRETEiJ_G0028798	Sbds	100	97.674	Mus_spretus
ENSVVUG00000016478	SBDS	67	94.643	ENSMPUG00000016192	SBDS	97	94.643	Mustela_putorius_furo
ENSVVUG00000016478	SBDS	73	96.154	ENSMLUG00000013575	SBDS	100	96.154	Myotis_lucifugus
ENSVVUG00000016478	SBDS	100	96.800	ENSNGAG00000012093	Sbds	100	96.800	Nannospalax_galili
ENSVVUG00000016478	SBDS	99	83.936	ENSNBRG00000017027	sbds	100	83.936	Neolamprologus_brichardi
ENSVVUG00000016478	SBDS	100	99.200	ENSNLEG00000013288	SBDS	100	99.200	Nomascus_leucogenys
ENSVVUG00000016478	SBDS	100	95.200	ENSOPRG00000008721	SBDS	100	95.200	Ochotona_princeps
ENSVVUG00000016478	SBDS	99	71.486	ENSODEG00000000137	-	85	74.800	Octodon_degus
ENSVVUG00000016478	SBDS	99	76.707	ENSODEG00000001116	-	99	76.707	Octodon_degus
ENSVVUG00000016478	SBDS	100	87.200	ENSODEG00000019253	-	84	87.200	Octodon_degus
ENSVVUG00000016478	SBDS	99	83.133	ENSONIG00000005874	sbds	100	83.133	Oreochromis_niloticus
ENSVVUG00000016478	SBDS	83	92.271	ENSOANG00000007674	-	100	92.271	Ornithorhynchus_anatinus
ENSVVUG00000016478	SBDS	100	97.200	ENSOCUG00000003170	SBDS	100	97.200	Oryctolagus_cuniculus
ENSVVUG00000016478	SBDS	99	80.321	ENSORLG00000023489	sbds	100	80.321	Oryzias_latipes
ENSVVUG00000016478	SBDS	99	79.920	ENSORLG00020019282	sbds	100	79.920	Oryzias_latipes_hni
ENSVVUG00000016478	SBDS	99	79.920	ENSORLG00015008005	sbds	100	79.920	Oryzias_latipes_hsok
ENSVVUG00000016478	SBDS	99	80.723	ENSOMEG00000022747	sbds	100	80.723	Oryzias_melastigma
ENSVVUG00000016478	SBDS	100	81.600	ENSOGAG00000015036	-	100	81.600	Otolemur_garnettii
ENSVVUG00000016478	SBDS	100	97.600	ENSOGAG00000009011	-	100	97.600	Otolemur_garnettii
ENSVVUG00000016478	SBDS	100	98.800	ENSOARG00000010609	SBDS	100	98.800	Ovis_aries
ENSVVUG00000016478	SBDS	100	98.400	ENSPPAG00000043889	-	100	98.400	Pan_paniscus
ENSVVUG00000016478	SBDS	100	99.200	ENSPPRG00000002307	SBDS	100	99.200	Panthera_pardus
ENSVVUG00000016478	SBDS	100	99.200	ENSPTIG00000021308	SBDS	100	99.200	Panthera_tigris_altaica
ENSVVUG00000016478	SBDS	100	84.400	ENSPTRG00000050835	-	100	84.400	Pan_troglodytes
ENSVVUG00000016478	SBDS	100	99.200	ENSPTRG00000019254	SBDS	100	99.200	Pan_troglodytes
ENSVVUG00000016478	SBDS	100	84.000	ENSPTRG00000047744	-	100	84.000	Pan_troglodytes
ENSVVUG00000016478	SBDS	87	96.313	ENSPTRG00000048174	-	96	96.313	Pan_troglodytes
ENSVVUG00000016478	SBDS	100	99.600	ENSPANG00000004078	SBDS	100	99.600	Papio_anubis
ENSVVUG00000016478	SBDS	100	84.400	ENSPKIG00000006489	sbds	100	84.400	Paramormyrops_kingsleyae
ENSVVUG00000016478	SBDS	83	90.338	ENSPSIG00000014603	SBDS	99	90.338	Pelodiscus_sinensis
ENSVVUG00000016478	SBDS	99	81.928	ENSPMGG00000004246	sbds	100	81.928	Periophthalmus_magnuspinnatus
ENSVVUG00000016478	SBDS	100	96.400	ENSPEMG00000008728	Sbds	100	96.400	Peromyscus_maniculatus_bairdii
ENSVVUG00000016478	SBDS	100	94.400	ENSPCIG00000029718	SBDS	100	94.400	Phascolarctos_cinereus
ENSVVUG00000016478	SBDS	99	80.723	ENSPFOG00000015837	sbds	100	80.723	Poecilia_formosa
ENSVVUG00000016478	SBDS	99	80.723	ENSPLAG00000003641	sbds	100	80.723	Poecilia_latipinna
ENSVVUG00000016478	SBDS	99	80.723	ENSPMEG00000019483	sbds	100	80.723	Poecilia_mexicana
ENSVVUG00000016478	SBDS	99	80.321	ENSPREG00000018758	sbds	100	80.321	Poecilia_reticulata
ENSVVUG00000016478	SBDS	100	99.200	ENSPPYG00000017513	SBDS	100	99.200	Pongo_abelii
ENSVVUG00000016478	SBDS	100	98.000	ENSPCOG00000021098	SBDS	100	98.000	Propithecus_coquereli
ENSVVUG00000016478	SBDS	100	98.400	ENSPVAG00000009369	SBDS	100	98.400	Pteropus_vampyrus
ENSVVUG00000016478	SBDS	99	83.534	ENSPNYG00000022403	sbds	100	83.534	Pundamilia_nyererei
ENSVVUG00000016478	SBDS	100	85.600	ENSPNAG00000001120	sbds	100	85.600	Pygocentrus_nattereri
ENSVVUG00000016478	SBDS	100	97.200	ENSRNOG00000000888	Sbds	100	97.200	Rattus_norvegicus
ENSVVUG00000016478	SBDS	100	99.200	ENSRBIG00000035557	SBDS	100	99.200	Rhinopithecus_bieti
ENSVVUG00000016478	SBDS	100	81.200	ENSRROG00000041986	-	100	79.600	Rhinopithecus_roxellana
ENSVVUG00000016478	SBDS	100	99.200	ENSRROG00000040842	-	100	99.200	Rhinopithecus_roxellana
ENSVVUG00000016478	SBDS	96	43.673	YLR022C	-	96	42.449	Saccharomyces_cerevisiae
ENSVVUG00000016478	SBDS	93	98.276	ENSSBOG00000022460	SBDS	100	98.276	Saimiri_boliviensis_boliviensis
ENSVVUG00000016478	SBDS	100	82.400	ENSSHAG00000010263	SBDS	100	82.400	Sarcophilus_harrisii
ENSVVUG00000016478	SBDS	100	85.600	ENSSFOG00015001108	sbds	100	85.600	Scleropages_formosus
ENSVVUG00000016478	SBDS	99	83.936	ENSSMAG00000020506	sbds	100	83.936	Scophthalmus_maximus
ENSVVUG00000016478	SBDS	99	82.731	ENSSDUG00000001528	sbds	100	82.731	Seriola_dumerili
ENSVVUG00000016478	SBDS	99	83.133	ENSSLDG00000003659	sbds	100	83.133	Seriola_lalandi_dorsalis
ENSVVUG00000016478	SBDS	73	98.837	ENSSARG00000001899	-	73	98.837	Sorex_araneus
ENSVVUG00000016478	SBDS	61	98.693	ENSSARG00000013132	-	100	98.693	Sorex_araneus
ENSVVUG00000016478	SBDS	100	86.400	ENSSPUG00000002699	SBDS	100	86.400	Sphenodon_punctatus
ENSVVUG00000016478	SBDS	99	83.133	ENSSPAG00000016419	sbds	100	75.600	Stegastes_partitus
ENSVVUG00000016478	SBDS	100	98.400	ENSSSCG00000007732	SBDS	100	98.400	Sus_scrofa
ENSVVUG00000016478	SBDS	66	89.091	ENSTGUG00000003426	SBDS	99	89.091	Taeniopygia_guttata
ENSVVUG00000016478	SBDS	99	83.133	ENSTRUG00000021443	sbds	100	83.133	Takifugu_rubripes
ENSVVUG00000016478	SBDS	99	81.928	ENSTNIG00000019000	sbds	100	81.928	Tetraodon_nigroviridis
ENSVVUG00000016478	SBDS	83	83.173	ENSTBEG00000001178	SBDS	100	83.173	Tupaia_belangeri
ENSVVUG00000016478	SBDS	100	78.400	ENSTTRG00000003921	SBDS	100	78.400	Tursiops_truncatus
ENSVVUG00000016478	SBDS	100	99.600	ENSUAMG00000001326	SBDS	100	99.600	Ursus_americanus
ENSVVUG00000016478	SBDS	100	99.600	ENSUMAG00000015353	SBDS	100	99.600	Ursus_maritimus
ENSVVUG00000016478	SBDS	100	86.400	ENSXETG00000010093	sbds	100	86.400	Xenopus_tropicalis
ENSVVUG00000016478	SBDS	99	73.494	ENSXCOG00000010639	sbds	100	73.494	Xiphophorus_couchianus
ENSVVUG00000016478	SBDS	99	81.124	ENSXMAG00000006065	sbds	100	81.124	Xiphophorus_maculatus