EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000016572 (Gene tree)
Gene ID: -
Gene Symbol: GPATCH1
Alias: ECGP|FLJ10206|FLJ38686|GPATC1
Full Name: G-patch domain containing 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 37592 bases
Position: chrNBDQ01000081.1:6495580-6533171
Accession: 24658
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000022610	DUF1604	PF07713.13	1.5e-35	1	1
ENSVVUP00000022610	G-patch	PF01585.23	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000029909	GPATCH1-201	2796	-	ENSVVUP00000022610	931 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000016572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000016572's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000016572	GPATCH1	91	89.202	ENSG00000076650	GPATCH1	94	89.257	Homo_sapiens
ENSVVUG00000016572	GPATCH1	91	94.830	ENSAMEG00000015575	GPATCH1	94	94.851	Ailuropoda_melanoleuca
ENSVVUG00000016572	GPATCH1	81	70.166	ENSAOCG00000006668	gpatch1	79	70.166	Amphiprion_ocellaris
ENSVVUG00000016572	GPATCH1	81	54.805	ENSAPEG00000000026	gpatch1	90	52.364	Amphiprion_percula
ENSVVUG00000016572	GPATCH1	81	52.764	ENSATEG00000014494	gpatch1	90	50.903	Anabas_testudineus
ENSVVUG00000016572	GPATCH1	90	60.491	ENSAPLG00000007584	GPATCH1	96	61.609	Anas_platyrhynchos
ENSVVUG00000016572	GPATCH1	91	89.085	ENSANAG00000027002	GPATCH1	94	89.143	Aotus_nancymaae
ENSVVUG00000016572	GPATCH1	81	54.707	ENSACLG00000024740	gpatch1	79	53.895	Astatotilapia_calliptera
ENSVVUG00000016572	GPATCH1	91	52.505	ENSAMXG00000020177	gpatch1	99	52.326	Astyanax_mexicanus
ENSVVUG00000016572	GPATCH1	91	90.235	ENSBTAG00000000721	GPATCH1	94	90.160	Bos_taurus
ENSVVUG00000016572	GPATCH1	91	88.837	ENSCJAG00000000684	GPATCH1	94	88.800	Callithrix_jacchus
ENSVVUG00000016572	GPATCH1	94	99.313	ENSCAFG00000007457	GPATCH1	79	99.313	Canis_familiaris
ENSVVUG00000016572	GPATCH1	100	99.141	ENSCAFG00020019731	GPATCH1	100	99.141	Canis_lupus_dingo
ENSVVUG00000016572	GPATCH1	91	91.529	ENSCHIG00000019626	GPATCH1	94	91.419	Capra_hircus
ENSVVUG00000016572	GPATCH1	88	78.986	ENSCAPG00000008827	GPATCH1	93	79.695	Cavia_aperea
ENSVVUG00000016572	GPATCH1	91	82.009	ENSCPOG00000024477	GPATCH1	94	82.594	Cavia_porcellus
ENSVVUG00000016572	GPATCH1	91	88.732	ENSCCAG00000024676	GPATCH1	94	89.257	Cebus_capucinus
ENSVVUG00000016572	GPATCH1	91	89.894	ENSCATG00000043637	GPATCH1	94	89.931	Cercocebus_atys
ENSVVUG00000016572	GPATCH1	89	83.313	ENSCLAG00000003395	-	94	83.195	Chinchilla_lanigera
ENSVVUG00000016572	GPATCH1	91	87.104	ENSCSAG00000004743	GPATCH1	94	87.215	Chlorocebus_sabaeus
ENSVVUG00000016572	GPATCH1	83	81.088	ENSCHOG00000012865	GPATCH1	89	81.088	Choloepus_hoffmanni
ENSVVUG00000016572	GPATCH1	78	70.725	ENSCPBG00000000666	GPATCH1	92	70.725	Chrysemys_picta_bellii
ENSVVUG00000016572	GPATCH1	81	35.640	ENSCING00000012518	-	95	35.110	Ciona_intestinalis
ENSVVUG00000016572	GPATCH1	85	85.802	ENSCANG00000012540	GPATCH1	93	86.167	Colobus_angolensis_palliatus
ENSVVUG00000016572	GPATCH1	88	81.611	ENSCGRG00001016736	Gpatch1	94	81.637	Cricetulus_griseus_chok1gshd
ENSVVUG00000016572	GPATCH1	89	67.294	ENSCGRG00000005069	Gpatch1	93	67.237	Cricetulus_griseus_crigri
ENSVVUG00000016572	GPATCH1	78	51.435	ENSCSEG00000019456	-	84	62.385	Cynoglossus_semilaevis
ENSVVUG00000016572	GPATCH1	90	50.939	ENSDARG00000033418	gpatch1	95	50.857	Danio_rerio
ENSVVUG00000016572	GPATCH1	95	87.188	ENSDNOG00000005291	GPATCH1	98	87.188	Dasypus_novemcinctus
ENSVVUG00000016572	GPATCH1	96	78.174	ENSDORG00000012546	Gpatch1	99	78.174	Dipodomys_ordii
ENSVVUG00000016572	GPATCH1	82	32.274	FBgn0036386	CG8833	67	33.477	Drosophila_melanogaster
ENSVVUG00000016572	GPATCH1	91	77.113	ENSETEG00000003626	GPATCH1	95	77.371	Echinops_telfairi
ENSVVUG00000016572	GPATCH1	94	37.514	ENSEBUG00000011286	gpatch1	91	38.123	Eptatretus_burgeri
ENSVVUG00000016572	GPATCH1	91	89.231	ENSEASG00005021162	GPATCH1	93	89.950	Equus_asinus_asinus
ENSVVUG00000016572	GPATCH1	95	89.189	ENSECAG00000022743	GPATCH1	92	89.189	Equus_caballus
ENSVVUG00000016572	GPATCH1	78	78.922	ENSEEUG00000012925	GPATCH1	78	78.922	Erinaceus_europaeus
ENSVVUG00000016572	GPATCH1	91	51.525	ENSELUG00000018195	gpatch1	90	50.731	Esox_lucius
ENSVVUG00000016572	GPATCH1	91	91.892	ENSFCAG00000014917	GPATCH1	94	91.991	Felis_catus
ENSVVUG00000016572	GPATCH1	92	61.425	ENSFALG00000007821	GPATCH1	89	62.763	Ficedula_albicollis
ENSVVUG00000016572	GPATCH1	89	83.051	ENSFDAG00000003871	GPATCH1	94	82.686	Fukomys_damarensis
ENSVVUG00000016572	GPATCH1	82	51.740	ENSGMOG00000003830	gpatch1	94	51.740	Gadus_morhua
ENSVVUG00000016572	GPATCH1	93	62.543	ENSGALG00000004839	GPATCH1	93	63.015	Gallus_gallus
ENSVVUG00000016572	GPATCH1	81	50.907	ENSGACG00000017544	gpatch1	97	47.924	Gasterosteus_aculeatus
ENSVVUG00000016572	GPATCH1	91	65.614	ENSGAGG00000010067	GPATCH1	95	65.056	Gopherus_agassizii
ENSVVUG00000016572	GPATCH1	90	88.636	ENSGGOG00000010862	GPATCH1	94	89.412	Gorilla_gorilla
ENSVVUG00000016572	GPATCH1	81	54.534	ENSHBUG00000023462	gpatch1	96	50.000	Haplochromis_burtoni
ENSVVUG00000016572	GPATCH1	91	84.056	ENSHGLG00000009334	GPATCH1	94	84.589	Heterocephalus_glaber_female
ENSVVUG00000016572	GPATCH1	91	84.174	ENSHGLG00100018074	GPATCH1	94	84.703	Heterocephalus_glaber_male
ENSVVUG00000016572	GPATCH1	93	51.652	ENSIPUG00000014977	gpatch1	90	52.392	Ictalurus_punctatus
ENSVVUG00000016572	GPATCH1	91	86.502	ENSSTOG00000003720	GPATCH1	94	86.629	Ictidomys_tridecemlineatus
ENSVVUG00000016572	GPATCH1	91	84.000	ENSJJAG00000023765	Gpatch1	94	83.867	Jaculus_jaculus
ENSVVUG00000016572	GPATCH1	90	51.392	ENSKMAG00000017950	gpatch1	89	51.220	Kryptolebias_marmoratus
ENSVVUG00000016572	GPATCH1	81	52.130	ENSLBEG00000026527	gpatch1	88	50.785	Labrus_bergylta
ENSVVUG00000016572	GPATCH1	88	59.353	ENSLACG00000008130	GPATCH1	90	59.472	Latimeria_chalumnae
ENSVVUG00000016572	GPATCH1	82	57.902	ENSLOCG00000001800	gpatch1	90	55.086	Lepisosteus_oculatus
ENSVVUG00000016572	GPATCH1	91	88.837	ENSLAFG00000013589	GPATCH1	94	89.016	Loxodonta_africana
ENSVVUG00000016572	GPATCH1	90	89.917	ENSMFAG00000034418	GPATCH1	95	89.917	Macaca_fascicularis
ENSVVUG00000016572	GPATCH1	91	89.566	ENSMMUG00000011790	GPATCH1	94	89.612	Macaca_mulatta
ENSVVUG00000016572	GPATCH1	91	89.437	ENSMNEG00000045084	GPATCH1	94	89.486	Macaca_nemestrina
ENSVVUG00000016572	GPATCH1	91	77.791	ENSMLEG00000043840	GPATCH1	93	78.146	Mandrillus_leucophaeus
ENSVVUG00000016572	GPATCH1	81	54.580	ENSMZEG00005001926	gpatch1	80	53.768	Maylandia_zebra
ENSVVUG00000016572	GPATCH1	91	63.594	ENSMGAG00000005775	GPATCH1	93	62.683	Meleagris_gallopavo
ENSVVUG00000016572	GPATCH1	90	78.799	ENSMICG00000004829	GPATCH1	93	79.505	Microcebus_murinus
ENSVVUG00000016572	GPATCH1	91	82.126	ENSMOCG00000000174	Gpatch1	95	82.139	Microtus_ochrogaster
ENSVVUG00000016572	GPATCH1	81	50.946	ENSMMOG00000002140	gpatch1	87	51.314	Mola_mola
ENSVVUG00000016572	GPATCH1	91	75.587	ENSMODG00000012226	GPATCH1	90	75.587	Monodelphis_domestica
ENSVVUG00000016572	GPATCH1	81	51.750	ENSMALG00000014386	gpatch1	91	50.629	Monopterus_albus
ENSVVUG00000016572	GPATCH1	93	84.028	ENSMUSG00000063808	Gpatch1	100	93.878	Mus_musculus
ENSVVUG00000016572	GPATCH1	93	84.411	MGP_PahariEiJ_G0012816	Gpatch1	100	94.898	Mus_pahari
ENSVVUG00000016572	GPATCH1	93	83.121	MGP_SPRETEiJ_G0030681	Gpatch1	100	94.898	Mus_spretus
ENSVVUG00000016572	GPATCH1	91	93.420	ENSMPUG00000007658	GPATCH1	94	93.478	Mustela_putorius_furo
ENSVVUG00000016572	GPATCH1	91	89.307	ENSMLUG00000012161	GPATCH1	94	89.359	Myotis_lucifugus
ENSVVUG00000016572	GPATCH1	91	84.859	ENSNGAG00000012455	Gpatch1	94	84.783	Nannospalax_galili
ENSVVUG00000016572	GPATCH1	91	88.954	ENSNLEG00000007659	GPATCH1	94	89.016	Nomascus_leucogenys
ENSVVUG00000016572	GPATCH1	79	67.984	ENSMEUG00000015174	GPATCH1	79	67.439	Notamacropus_eugenii
ENSVVUG00000016572	GPATCH1	91	81.257	ENSODEG00000007103	GPATCH1	94	81.519	Octodon_degus
ENSVVUG00000016572	GPATCH1	82	55.412	ENSONIG00000003302	gpatch1	91	53.819	Oreochromis_niloticus
ENSVVUG00000016572	GPATCH1	93	72.050	ENSOANG00000012732	GPATCH1	91	72.373	Ornithorhynchus_anatinus
ENSVVUG00000016572	GPATCH1	91	88.249	ENSOCUG00000015905	GPATCH1	94	88.101	Oryctolagus_cuniculus
ENSVVUG00000016572	GPATCH1	90	51.579	ENSORLG00000018706	gpatch1	88	51.472	Oryzias_latipes
ENSVVUG00000016572	GPATCH1	90	49.769	ENSOMEG00000022688	gpatch1	94	50.168	Oryzias_melastigma
ENSVVUG00000016572	GPATCH1	85	87.990	ENSOGAG00000004016	GPATCH1	100	87.990	Otolemur_garnettii
ENSVVUG00000016572	GPATCH1	90	90.866	ENSOARG00000004365	GPATCH1	93	90.657	Ovis_aries
ENSVVUG00000016572	GPATCH1	91	88.850	ENSPPAG00000020990	GPATCH1	94	88.914	Pan_paniscus
ENSVVUG00000016572	GPATCH1	91	92.244	ENSPPRG00000017245	GPATCH1	94	92.334	Panthera_pardus
ENSVVUG00000016572	GPATCH1	91	92.949	ENSPTIG00000019649	GPATCH1	94	93.021	Panthera_tigris_altaica
ENSVVUG00000016572	GPATCH1	91	88.967	ENSPTRG00000010803	GPATCH1	94	89.029	Pan_troglodytes
ENSVVUG00000016572	GPATCH1	91	89.659	ENSPANG00000012374	GPATCH1	98	89.703	Papio_anubis
ENSVVUG00000016572	GPATCH1	81	56.888	ENSPKIG00000020745	gpatch1	82	56.062	Paramormyrops_kingsleyae
ENSVVUG00000016572	GPATCH1	91	65.187	ENSPSIG00000013433	GPATCH1	94	64.447	Pelodiscus_sinensis
ENSVVUG00000016572	GPATCH1	91	83.431	ENSPEMG00000000636	Gpatch1	94	83.410	Peromyscus_maniculatus_bairdii
ENSVVUG00000016572	GPATCH1	91	75.943	ENSPCIG00000021003	GPATCH1	99	74.578	Phascolarctos_cinereus
ENSVVUG00000016572	GPATCH1	71	49.703	ENSPREG00000008264	gpatch1	97	43.945	Poecilia_reticulata
ENSVVUG00000016572	GPATCH1	91	86.033	ENSPPYG00000009824	GPATCH1	94	86.171	Pongo_abelii
ENSVVUG00000016572	GPATCH1	83	80.615	ENSPCAG00000005931	GPATCH1	86	80.856	Procavia_capensis
ENSVVUG00000016572	GPATCH1	93	81.609	ENSPCOG00000009674	GPATCH1	97	82.901	Propithecus_coquereli
ENSVVUG00000016572	GPATCH1	84	87.312	ENSPVAG00000017767	GPATCH1	86	87.312	Pteropus_vampyrus
ENSVVUG00000016572	GPATCH1	81	54.835	ENSPNYG00000018189	gpatch1	89	54.440	Pundamilia_nyererei
ENSVVUG00000016572	GPATCH1	91	52.753	ENSPNAG00000013187	gpatch1	94	52.903	Pygocentrus_nattereri
ENSVVUG00000016572	GPATCH1	93	83.912	ENSRNOG00000011584	Gpatch1	94	83.867	Rattus_norvegicus
ENSVVUG00000016572	GPATCH1	93	81.640	ENSRBIG00000034723	GPATCH1	93	80.822	Rhinopithecus_bieti
ENSVVUG00000016572	GPATCH1	91	89.671	ENSRROG00000024428	GPATCH1	94	89.829	Rhinopithecus_roxellana
ENSVVUG00000016572	GPATCH1	91	89.072	ENSSBOG00000034650	GPATCH1	94	89.130	Saimiri_boliviensis_boliviensis
ENSVVUG00000016572	GPATCH1	91	75.264	ENSSHAG00000016016	GPATCH1	94	74.315	Sarcophilus_harrisii
ENSVVUG00000016572	GPATCH1	81	56.154	ENSSFOG00015011535	gpatch1	89	54.312	Scleropages_formosus
ENSVVUG00000016572	GPATCH1	81	49.020	ENSSMAG00000002883	gpatch1	93	47.948	Scophthalmus_maximus
ENSVVUG00000016572	GPATCH1	81	52.256	ENSSDUG00000007444	gpatch1	90	49.558	Seriola_dumerili
ENSVVUG00000016572	GPATCH1	81	52.447	ENSSLDG00000002856	gpatch1	89	53.325	Seriola_lalandi_dorsalis
ENSVVUG00000016572	GPATCH1	73	85.630	ENSSARG00000004108	GPATCH1	72	85.630	Sorex_araneus
ENSVVUG00000016572	GPATCH1	95	90.023	ENSSSCG00000002865	GPATCH1	98	90.023	Sus_scrofa
ENSVVUG00000016572	GPATCH1	92	63.164	ENSTGUG00000009401	GPATCH1	91	63.195	Taeniopygia_guttata
ENSVVUG00000016572	GPATCH1	81	51.963	ENSTRUG00000025081	gpatch1	90	50.176	Takifugu_rubripes
ENSVVUG00000016572	GPATCH1	81	51.832	ENSTRUG00000005785	-	90	50.059	Takifugu_rubripes
ENSVVUG00000016572	GPATCH1	81	53.816	ENSTNIG00000002554	gpatch1	99	54.397	Tetraodon_nigroviridis
ENSVVUG00000016572	GPATCH1	64	77.295	ENSTBEG00000007750	-	84	77.295	Tupaia_belangeri
ENSVVUG00000016572	GPATCH1	91	81.712	ENSTTRG00000012221	GPATCH1	94	81.870	Tursiops_truncatus
ENSVVUG00000016572	GPATCH1	91	93.972	ENSUMAG00000014645	GPATCH1	96	92.813	Ursus_maritimus
ENSVVUG00000016572	GPATCH1	79	96.571	ENSVPAG00000010313	GPATCH1	88	96.739	Vicugna_pacos
ENSVVUG00000016572	GPATCH1	92	52.105	ENSXETG00000018276	gpatch1	93	53.979	Xenopus_tropicalis