EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000016573 (Gene tree)
Gene ID: -
Gene Symbol: SSB
Alias: LARP3|La|La/SSB
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 10881 bases
Position: chrNBDQ01000016.1:9700546-9711426
Accession: 11316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000022609	RRM_1	PF00076.22	1.5e-13	1	1
ENSVVUP00000022609	RRM_3	PF08777.11	3.4e-31	1	1
ENSVVUP00000022609	La	PF05383.17	1.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000029908	SSB-201	1572	-	ENSVVUP00000022609	523 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000016573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000016573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000016573	SSB	78	93.888	ENSG00000138385	SSB	100	97.500	Homo_sapiens
ENSVVUG00000016573	SSB	76	54.591	ENSAPOG00000003448	ssb	100	55.037	Acanthochromis_polyacanthus
ENSVVUG00000016573	SSB	78	94.524	ENSAMEG00000010507	SSB	100	94.524	Ailuropoda_melanoleuca
ENSVVUG00000016573	SSB	71	58.289	ENSACIG00000001738	ssb	97	58.289	Amphilophus_citrinellus
ENSVVUG00000016573	SSB	76	54.839	ENSAOCG00000020398	ssb	100	55.528	Amphiprion_ocellaris
ENSVVUG00000016573	SSB	77	55.257	ENSAPEG00000020395	ssb	100	55.774	Amphiprion_percula
ENSVVUG00000016573	SSB	77	56.265	ENSATEG00000016884	ssb	100	56.757	Anabas_testudineus
ENSVVUG00000016573	SSB	78	69.811	ENSAPLG00000006109	SSB	100	71.831	Anas_platyrhynchos
ENSVVUG00000016573	SSB	78	67.153	ENSACAG00000017008	SSB	99	67.153	Anolis_carolinensis
ENSVVUG00000016573	SSB	78	84.729	ENSANAG00000027195	-	100	84.729	Aotus_nancymaae
ENSVVUG00000016573	SSB	77	54.568	ENSACLG00000010798	ssb	100	54.321	Astatotilapia_calliptera
ENSVVUG00000016573	SSB	76	54.657	ENSAMXG00000012606	ssb	100	55.932	Astyanax_mexicanus
ENSVVUG00000016573	SSB	78	94.581	ENSBTAG00000008716	SSB	100	94.581	Bos_taurus
ENSVVUG00000016573	SSB	57	34.983	WBGene00016653	C44E4.4	76	34.983	Caenorhabditis_elegans
ENSVVUG00000016573	SSB	78	93.596	ENSCJAG00000045073	SSB	100	93.596	Callithrix_jacchus
ENSVVUG00000016573	SSB	78	100.000	ENSCAFG00000012418	SSB	100	100.000	Canis_familiaris
ENSVVUG00000016573	SSB	78	100.000	ENSCAFG00020002900	SSB	100	100.000	Canis_lupus_dingo
ENSVVUG00000016573	SSB	78	88.424	ENSCHIG00000022196	-	100	88.424	Capra_hircus
ENSVVUG00000016573	SSB	78	94.581	ENSCHIG00000022624	-	100	94.581	Capra_hircus
ENSVVUG00000016573	SSB	78	94.335	ENSTSYG00000000097	SSB	100	94.335	Carlito_syrichta
ENSVVUG00000016573	SSB	78	95.320	ENSCPOG00000003338	SSB	100	95.320	Cavia_porcellus
ENSVVUG00000016573	SSB	78	94.089	ENSCCAG00000035147	SSB	100	94.089	Cebus_capucinus
ENSVVUG00000016573	SSB	78	70.197	ENSCATG00000042909	-	100	70.197	Cercocebus_atys
ENSVVUG00000016573	SSB	78	73.892	ENSCATG00000036701	SSB	100	73.892	Cercocebus_atys
ENSVVUG00000016573	SSB	78	95.320	ENSCLAG00000015617	-	100	95.320	Chinchilla_lanigera
ENSVVUG00000016573	SSB	78	94.146	ENSCSAG00000015200	SSB	90	94.146	Chlorocebus_sabaeus
ENSVVUG00000016573	SSB	76	85.930	ENSCSAG00000018390	-	100	85.930	Chlorocebus_sabaeus
ENSVVUG00000016573	SSB	78	94.335	ENSCHOG00000007763	SSB	100	94.335	Choloepus_hoffmanni
ENSVVUG00000016573	SSB	78	78.537	ENSCPBG00000006519	SSB	100	79.268	Chrysemys_picta_bellii
ENSVVUG00000016573	SSB	78	94.828	ENSCANG00000027695	SSB	100	94.828	Colobus_angolensis_palliatus
ENSVVUG00000016573	SSB	78	80.049	ENSCANG00000033240	-	100	80.049	Colobus_angolensis_palliatus
ENSVVUG00000016573	SSB	76	74.185	ENSCANG00000028838	-	95	74.185	Colobus_angolensis_palliatus
ENSVVUG00000016573	SSB	78	79.319	ENSCGRG00001024831	Ssb	100	80.535	Cricetulus_griseus_chok1gshd
ENSVVUG00000016573	SSB	78	79.319	ENSCGRG00000005387	Ssb	100	80.535	Cricetulus_griseus_crigri
ENSVVUG00000016573	SSB	76	56.359	ENSCSEG00000011599	ssb	99	57.107	Cynoglossus_semilaevis
ENSVVUG00000016573	SSB	77	57.108	ENSCVAG00000021558	ssb	100	57.598	Cyprinodon_variegatus
ENSVVUG00000016573	SSB	76	56.436	ENSDARG00000029252	ssb	99	56.436	Danio_rerio
ENSVVUG00000016573	SSB	78	94.089	ENSDNOG00000013450	SSB	100	94.089	Dasypus_novemcinctus
ENSVVUG00000016573	SSB	78	84.223	ENSDORG00000005543	Ssb	100	84.223	Dipodomys_ordii
ENSVVUG00000016573	SSB	65	33.524	FBgn0011638	La	86	33.989	Drosophila_melanogaster
ENSVVUG00000016573	SSB	75	47.583	ENSEBUG00000001237	ssb	96	47.837	Eptatretus_burgeri
ENSVVUG00000016573	SSB	78	96.305	ENSEASG00005022835	SSB	100	96.305	Equus_asinus_asinus
ENSVVUG00000016573	SSB	78	96.552	ENSECAG00000018495	SSB	100	96.552	Equus_caballus
ENSVVUG00000016573	SSB	59	75.490	ENSEEUG00000008077	SSB	78	75.490	Erinaceus_europaeus
ENSVVUG00000016573	SSB	76	58.853	ENSELUG00000020929	ssb	100	59.360	Esox_lucius
ENSVVUG00000016573	SSB	78	97.044	ENSFCAG00000011601	SSB	100	97.044	Felis_catus
ENSVVUG00000016573	SSB	78	75.490	ENSFALG00000000930	SSB	100	75.490	Ficedula_albicollis
ENSVVUG00000016573	SSB	78	95.074	ENSFDAG00000000598	SSB	100	95.074	Fukomys_damarensis
ENSVVUG00000016573	SSB	56	54.849	ENSFHEG00000003268	ssb	94	55.082	Fundulus_heteroclitus
ENSVVUG00000016573	SSB	75	54.926	ENSGMOG00000002664	ssb	99	55.419	Gadus_morhua
ENSVVUG00000016573	SSB	78	75.061	ENSGALG00000009677	SSB	100	75.061	Gallus_gallus
ENSVVUG00000016573	SSB	77	56.020	ENSGAFG00000002749	ssb	100	56.265	Gambusia_affinis
ENSVVUG00000016573	SSB	77	53.753	ENSGACG00000005107	ssb	100	54.106	Gasterosteus_aculeatus
ENSVVUG00000016573	SSB	78	77.805	ENSGAGG00000007807	SSB	100	78.537	Gopherus_agassizii
ENSVVUG00000016573	SSB	78	77.833	ENSGGOG00000024891	-	100	77.833	Gorilla_gorilla
ENSVVUG00000016573	SSB	77	54.074	ENSHBUG00000006584	ssb	100	53.827	Haplochromis_burtoni
ENSVVUG00000016573	SSB	78	93.462	ENSHGLG00000017580	-	100	93.462	Heterocephalus_glaber_female
ENSVVUG00000016573	SSB	78	86.520	ENSHGLG00000004478	-	100	86.520	Heterocephalus_glaber_female
ENSVVUG00000016573	SSB	78	85.961	ENSHGLG00000005832	-	100	85.961	Heterocephalus_glaber_female
ENSVVUG00000016573	SSB	78	93.462	ENSHGLG00100003084	-	100	93.462	Heterocephalus_glaber_male
ENSVVUG00000016573	SSB	78	81.773	ENSHGLG00100008767	-	100	81.773	Heterocephalus_glaber_male
ENSVVUG00000016573	SSB	76	54.271	ENSHCOG00000019011	ssb	99	54.523	Hippocampus_comes
ENSVVUG00000016573	SSB	76	56.757	ENSIPUG00000003681	SSB	99	58.416	Ictalurus_punctatus
ENSVVUG00000016573	SSB	78	94.828	ENSSTOG00000008416	SSB	100	94.828	Ictidomys_tridecemlineatus
ENSVVUG00000016573	SSB	78	79.245	ENSJJAG00000023158	-	100	79.245	Jaculus_jaculus
ENSVVUG00000016573	SSB	77	67.494	ENSJJAG00000016250	-	99	67.494	Jaculus_jaculus
ENSVVUG00000016573	SSB	77	56.020	ENSKMAG00000017317	ssb	100	56.511	Kryptolebias_marmoratus
ENSVVUG00000016573	SSB	76	53.598	ENSLBEG00000017345	ssb	100	54.545	Labrus_bergylta
ENSVVUG00000016573	SSB	77	66.912	ENSLACG00000014056	SSB	99	69.193	Latimeria_chalumnae
ENSVVUG00000016573	SSB	76	66.085	ENSLOCG00000007933	ssb	99	66.584	Lepisosteus_oculatus
ENSVVUG00000016573	SSB	58	70.100	ENSLAFG00000026721	-	99	70.100	Loxodonta_africana
ENSVVUG00000016573	SSB	78	78.079	ENSLAFG00000028909	-	100	78.079	Loxodonta_africana
ENSVVUG00000016573	SSB	78	86.730	ENSLAFG00000000867	-	100	88.389	Loxodonta_africana
ENSVVUG00000016573	SSB	68	80.952	ENSMFAG00000041478	-	100	80.952	Macaca_fascicularis
ENSVVUG00000016573	SSB	78	94.828	ENSMFAG00000039066	SSB	100	94.828	Macaca_fascicularis
ENSVVUG00000016573	SSB	77	66.584	ENSMMUG00000039889	-	100	66.832	Macaca_mulatta
ENSVVUG00000016573	SSB	78	79.803	ENSMMUG00000011724	-	97	79.803	Macaca_mulatta
ENSVVUG00000016573	SSB	78	94.828	ENSMMUG00000023051	SSB	100	94.828	Macaca_mulatta
ENSVVUG00000016573	SSB	78	82.238	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSVVUG00000016573	SSB	68	80.952	ENSMNEG00000034698	-	100	80.952	Macaca_nemestrina
ENSVVUG00000016573	SSB	78	66.995	ENSMLEG00000042644	-	100	66.995	Mandrillus_leucophaeus
ENSVVUG00000016573	SSB	78	94.828	ENSMLEG00000035717	SSB	100	94.828	Mandrillus_leucophaeus
ENSVVUG00000016573	SSB	77	58.477	ENSMAMG00000004800	ssb	100	58.968	Mastacembelus_armatus
ENSVVUG00000016573	SSB	77	54.568	ENSMZEG00005005749	ssb	100	54.321	Maylandia_zebra
ENSVVUG00000016573	SSB	78	75.061	ENSMGAG00000010328	SSB	99	76.098	Meleagris_gallopavo
ENSVVUG00000016573	SSB	77	85.644	ENSMICG00000033304	-	99	85.533	Microcebus_murinus
ENSVVUG00000016573	SSB	77	95.050	ENSMICG00000028252	-	99	95.050	Microcebus_murinus
ENSVVUG00000016573	SSB	78	77.644	ENSMODG00000008227	-	100	78.846	Monodelphis_domestica
ENSVVUG00000016573	SSB	66	85.535	ENSMODG00000019271	-	99	85.535	Monodelphis_domestica
ENSVVUG00000016573	SSB	78	65.271	ENSMODG00000007027	-	100	65.271	Monodelphis_domestica
ENSVVUG00000016573	SSB	70	58.583	ENSMALG00000008045	ssb	90	58.621	Monopterus_albus
ENSVVUG00000016573	SSB	78	77.014	MGP_CAROLIEiJ_G0023629	-	100	91.304	Mus_caroli
ENSVVUG00000016573	SSB	78	76.303	ENSMUSG00000068882	Ssb	100	91.304	Mus_musculus
ENSVVUG00000016573	SSB	78	76.303	MGP_PahariEiJ_G0025081	-	100	91.304	Mus_pahari
ENSVVUG00000016573	SSB	78	76.303	MGP_SPRETEiJ_G0024551	Ssb	100	91.304	Mus_spretus
ENSVVUG00000016573	SSB	78	98.522	ENSMPUG00000000785	SSB	100	98.522	Mustela_putorius_furo
ENSVVUG00000016573	SSB	78	89.786	ENSMLUG00000016316	SSB	100	89.786	Myotis_lucifugus
ENSVVUG00000016573	SSB	77	54.568	ENSNBRG00000012661	ssb	100	54.321	Neolamprologus_brichardi
ENSVVUG00000016573	SSB	78	94.581	ENSNLEG00000004958	SSB	100	94.581	Nomascus_leucogenys
ENSVVUG00000016573	SSB	78	68.227	ENSNLEG00000028754	-	100	68.227	Nomascus_leucogenys
ENSVVUG00000016573	SSB	56	71.478	ENSOPRG00000008475	-	100	72.509	Ochotona_princeps
ENSVVUG00000016573	SSB	72	88.654	ENSODEG00000004202	-	100	88.654	Octodon_degus
ENSVVUG00000016573	SSB	77	54.568	ENSONIG00000008776	ssb	100	54.321	Oreochromis_niloticus
ENSVVUG00000016573	SSB	78	83.498	ENSOANG00000008543	SSB	100	83.498	Ornithorhynchus_anatinus
ENSVVUG00000016573	SSB	78	93.842	ENSOCUG00000010396	SSB	100	93.842	Oryctolagus_cuniculus
ENSVVUG00000016573	SSB	77	57.494	ENSORLG00000017208	ssb	100	57.740	Oryzias_latipes
ENSVVUG00000016573	SSB	77	57.248	ENSORLG00020022574	ssb	100	57.494	Oryzias_latipes_hni
ENSVVUG00000016573	SSB	77	57.002	ENSORLG00015016592	ssb	100	57.494	Oryzias_latipes_hsok
ENSVVUG00000016573	SSB	76	56.965	ENSOMEG00000003193	ssb	100	57.882	Oryzias_melastigma
ENSVVUG00000016573	SSB	78	90.307	ENSOGAG00000029768	SSB	100	90.307	Otolemur_garnettii
ENSVVUG00000016573	SSB	78	94.089	ENSOARG00000002906	SSB	100	94.089	Ovis_aries
ENSVVUG00000016573	SSB	78	93.888	ENSPPAG00000042673	SSB	100	93.888	Pan_paniscus
ENSVVUG00000016573	SSB	76	73.418	ENSPPAG00000006189	-	96	77.212	Pan_paniscus
ENSVVUG00000016573	SSB	78	77.094	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSVVUG00000016573	SSB	78	97.044	ENSPPRG00000006599	SSB	100	97.044	Panthera_pardus
ENSVVUG00000016573	SSB	78	96.585	ENSPTIG00000011021	SSB	98	96.585	Panthera_tigris_altaica
ENSVVUG00000016573	SSB	78	93.888	ENSPTRG00000012620	SSB	100	93.888	Pan_troglodytes
ENSVVUG00000016573	SSB	78	73.892	ENSPTRG00000042880	-	100	73.892	Pan_troglodytes
ENSVVUG00000016573	SSB	78	94.828	ENSPANG00000007440	SSB	100	94.828	Papio_anubis
ENSVVUG00000016573	SSB	76	65.163	ENSPANG00000031877	-	95	65.163	Papio_anubis
ENSVVUG00000016573	SSB	78	67.488	ENSPANG00000034126	-	100	67.980	Papio_anubis
ENSVVUG00000016573	SSB	76	62.189	ENSPKIG00000019325	ssb	99	63.300	Paramormyrops_kingsleyae
ENSVVUG00000016573	SSB	80	73.148	ENSPSIG00000002265	SSB	94	76.087	Pelodiscus_sinensis
ENSVVUG00000016573	SSB	66	53.977	ENSPMGG00000020075	ssb	93	54.261	Periophthalmus_magnuspinnatus
ENSVVUG00000016573	SSB	70	47.709	ENSPMAG00000002982	ssb	89	49.091	Petromyzon_marinus
ENSVVUG00000016573	SSB	78	82.555	ENSPCIG00000028591	-	100	83.292	Phascolarctos_cinereus
ENSVVUG00000016573	SSB	77	57.248	ENSPFOG00000009650	ssb	100	57.494	Poecilia_formosa
ENSVVUG00000016573	SSB	77	57.002	ENSPLAG00000020498	ssb	100	57.248	Poecilia_latipinna
ENSVVUG00000016573	SSB	77	56.757	ENSPMEG00000001051	ssb	100	57.248	Poecilia_mexicana
ENSVVUG00000016573	SSB	73	57.292	ENSPREG00000003708	ssb	99	57.552	Poecilia_reticulata
ENSVVUG00000016573	SSB	78	94.581	ENSPPYG00000012919	SSB	100	94.581	Pongo_abelii
ENSVVUG00000016573	SSB	73	88.802	ENSPCAG00000010276	SSB	100	88.802	Procavia_capensis
ENSVVUG00000016573	SSB	78	91.379	ENSPCOG00000015741	-	100	91.379	Propithecus_coquereli
ENSVVUG00000016573	SSB	78	83.744	ENSPCOG00000023189	-	100	83.744	Propithecus_coquereli
ENSVVUG00000016573	SSB	68	95.480	ENSPVAG00000006615	SSB	100	95.480	Pteropus_vampyrus
ENSVVUG00000016573	SSB	77	54.568	ENSPNYG00000006444	ssb	100	54.321	Pundamilia_nyererei
ENSVVUG00000016573	SSB	76	57.143	ENSPNAG00000011708	ssb	100	58.010	Pygocentrus_nattereri
ENSVVUG00000016573	SSB	78	77.725	ENSRNOG00000007998	Ssb	100	77.725	Rattus_norvegicus
ENSVVUG00000016573	SSB	78	78.240	ENSRNOG00000011606	AABR07061825.1	100	78.240	Rattus_norvegicus
ENSVVUG00000016573	SSB	78	67.813	ENSRBIG00000029918	-	100	67.813	Rhinopithecus_bieti
ENSVVUG00000016573	SSB	73	78.215	ENSRBIG00000041232	-	98	78.421	Rhinopithecus_bieti
ENSVVUG00000016573	SSB	78	78.832	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSVVUG00000016573	SSB	69	86.501	ENSRBIG00000041608	-	98	86.501	Rhinopithecus_bieti
ENSVVUG00000016573	SSB	78	77.887	ENSRROG00000007149	-	100	77.887	Rhinopithecus_roxellana
ENSVVUG00000016573	SSB	76	79.597	ENSRROG00000031684	-	100	79.597	Rhinopithecus_roxellana
ENSVVUG00000016573	SSB	78	94.828	ENSRROG00000040346	SSB	100	94.828	Rhinopithecus_roxellana
ENSVVUG00000016573	SSB	76	85.037	ENSRROG00000034102	-	98	84.962	Rhinopithecus_roxellana
ENSVVUG00000016573	SSB	78	94.581	ENSSBOG00000027204	SSB	100	94.581	Saimiri_boliviensis_boliviensis
ENSVVUG00000016573	SSB	78	81.572	ENSSHAG00000018062	SSB	100	83.292	Sarcophilus_harrisii
ENSVVUG00000016573	SSB	77	63.457	ENSSFOG00015000550	ssb	100	64.059	Scleropages_formosus
ENSVVUG00000016573	SSB	76	53.500	ENSSMAG00000013885	ssb	99	57.219	Scophthalmus_maximus
ENSVVUG00000016573	SSB	77	56.511	ENSSDUG00000020117	ssb	100	56.757	Seriola_dumerili
ENSVVUG00000016573	SSB	77	54.455	ENSSLDG00000002525	ssb	100	54.703	Seriola_lalandi_dorsalis
ENSVVUG00000016573	SSB	73	84.896	ENSSARG00000007747	SSB	100	84.896	Sorex_araneus
ENSVVUG00000016573	SSB	78	76.961	ENSSPUG00000012112	SSB	100	76.961	Sphenodon_punctatus
ENSVVUG00000016573	SSB	76	54.839	ENSSPAG00000005696	ssb	100	55.528	Stegastes_partitus
ENSVVUG00000016573	SSB	76	77.889	ENSSSCG00000015938	SSB	98	78.446	Sus_scrofa
ENSVVUG00000016573	SSB	78	74.634	ENSTGUG00000007942	SSB	100	75.122	Taeniopygia_guttata
ENSVVUG00000016573	SSB	77	56.790	ENSTRUG00000017839	ssb	100	57.389	Takifugu_rubripes
ENSVVUG00000016573	SSB	70	59.511	ENSTNIG00000000915	ssb	100	59.511	Tetraodon_nigroviridis
ENSVVUG00000016573	SSB	64	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSVVUG00000016573	SSB	78	94.828	ENSTTRG00000002152	SSB	100	94.828	Tursiops_truncatus
ENSVVUG00000016573	SSB	72	98.674	ENSUAMG00000027833	SSB	99	98.674	Ursus_americanus
ENSVVUG00000016573	SSB	78	98.276	ENSUMAG00000013907	SSB	100	98.276	Ursus_maritimus
ENSVVUG00000016573	SSB	78	94.089	ENSVPAG00000007183	SSB	100	94.089	Vicugna_pacos
ENSVVUG00000016573	SSB	73	62.368	ENSXETG00000025402	ssb	89	64.304	Xenopus_tropicalis
ENSVVUG00000016573	SSB	73	55.352	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSVVUG00000016573	SSB	77	56.020	ENSXMAG00000004888	ssb	100	56.265	Xiphophorus_maculatus