EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000016876 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 6537 bases
Position: chrNBDQ01000081.1:9375392-9381928
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000023055	UPF0086	PF01868.16	2.3e-26	1	1
ENSVVUP00000023051	UPF0086	PF01868.16	3.4e-15	1	1
ENSVVUP00000023052	UPF0086	PF01868.16	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000030512	-	1110	-	ENSVVUP00000023055	286 (aa)	-	-
ENSVVUT00000030508	-	1955	-	ENSVVUP00000023052	345 (aa)	-	-
ENSVVUT00000030506	-	2131	-	ENSVVUP00000023051	155 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000016876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000016876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000016876	-	71	89.604	ENSG00000105171	POP4	100	93.750	Homo_sapiens
ENSVVUG00000016876	-	71	91.584	ENSAMEG00000018329	-	92	91.584	Ailuropoda_melanoleuca
ENSVVUG00000016876	-	71	77.941	ENSAMEG00000003172	-	92	77.941	Ailuropoda_melanoleuca
ENSVVUG00000016876	-	68	62.564	ENSACIG00000008358	pop4	93	62.564	Amphilophus_citrinellus
ENSVVUG00000016876	-	70	61.765	ENSAOCG00000010116	pop4	99	60.784	Amphiprion_ocellaris
ENSVVUG00000016876	-	70	61.386	ENSAPEG00000002829	pop4	85	60.396	Amphiprion_percula
ENSVVUG00000016876	-	72	58.654	ENSATEG00000013028	pop4	94	57.692	Anabas_testudineus
ENSVVUG00000016876	-	69	72.081	ENSAPLG00000014051	POP4	95	72.081	Anas_platyrhynchos
ENSVVUG00000016876	-	71	88.614	ENSANAG00000020295	POP4	92	88.614	Aotus_nancymaae
ENSVVUG00000016876	-	68	62.437	ENSACLG00000000526	pop4	88	61.026	Astatotilapia_calliptera
ENSVVUG00000016876	-	72	60.680	ENSAMXG00000002899	pop4	94	60.680	Astyanax_mexicanus
ENSVVUG00000016876	-	71	90.196	ENSBTAG00000002223	POP4	93	90.196	Bos_taurus
ENSVVUG00000016876	-	71	86.700	ENSCJAG00000046750	POP4	100	86.111	Callithrix_jacchus
ENSVVUG00000016876	-	64	97.802	ENSCAFG00000007630	POP4	100	97.802	Canis_familiaris
ENSVVUG00000016876	-	71	91.089	ENSCHIG00000016743	POP4	92	91.089	Capra_hircus
ENSVVUG00000016876	-	71	88.725	ENSTSYG00000003488	POP4	93	88.725	Carlito_syrichta
ENSVVUG00000016876	-	71	64.356	ENSCAPG00000011105	POP4	91	64.356	Cavia_aperea
ENSVVUG00000016876	-	70	87.562	ENSCPOG00000002992	POP4	91	87.562	Cavia_porcellus
ENSVVUG00000016876	-	71	88.614	ENSCCAG00000020285	-	92	88.614	Cebus_capucinus
ENSVVUG00000016876	-	66	76.720	ENSCCAG00000034244	-	90	73.762	Cebus_capucinus
ENSVVUG00000016876	-	71	90.099	ENSCATG00000036022	POP4	100	95.833	Cercocebus_atys
ENSVVUG00000016876	-	71	88.119	ENSCLAG00000013162	POP4	92	88.119	Chinchilla_lanigera
ENSVVUG00000016876	-	71	89.604	ENSCSAG00000004868	POP4	93	89.604	Chlorocebus_sabaeus
ENSVVUG00000016876	-	71	64.356	ENSCHOG00000002071	POP4	93	64.356	Choloepus_hoffmanni
ENSVVUG00000016876	-	73	72.115	ENSCPBG00000016132	POP4	95	72.115	Chrysemys_picta_bellii
ENSVVUG00000016876	-	65	33.508	ENSCING00000023871	-	94	33.508	Ciona_intestinalis
ENSVVUG00000016876	-	70	89.950	ENSCANG00000005924	POP4	99	89.950	Colobus_angolensis_palliatus
ENSVVUG00000016876	-	71	83.168	ENSCGRG00001017185	Pop4	92	82.673	Cricetulus_griseus_chok1gshd
ENSVVUG00000016876	-	71	83.168	ENSCGRG00000008155	Pop4	92	82.673	Cricetulus_griseus_crigri
ENSVVUG00000016876	-	72	52.885	ENSCSEG00000002946	pop4	94	52.174	Cynoglossus_semilaevis
ENSVVUG00000016876	-	71	42.647	ENSCVAG00000018602	POP4	87	41.667	Cyprinodon_variegatus
ENSVVUG00000016876	-	72	63.768	ENSDARG00000101472	pop4	94	63.768	Danio_rerio
ENSVVUG00000016876	-	71	86.634	ENSDNOG00000047663	POP4	81	86.634	Dasypus_novemcinctus
ENSVVUG00000016876	-	55	85.987	ENSDORG00000008577	Pop4	91	85.987	Dipodomys_ordii
ENSVVUG00000016876	-	66	33.000	FBgn0035831	CG8038	70	37.931	Drosophila_melanogaster
ENSVVUG00000016876	-	71	72.906	ENSETEG00000003607	POP4	92	72.906	Echinops_telfairi
ENSVVUG00000016876	-	71	44.335	ENSEBUG00000008575	pop4	91	44.335	Eptatretus_burgeri
ENSVVUG00000016876	-	72	40.909	ENSEBUG00000004305	pop4	96	40.909	Eptatretus_burgeri
ENSVVUG00000016876	-	72	45.413	ENSEBUG00000010447	pop4	85	45.413	Eptatretus_burgeri
ENSVVUG00000016876	-	71	90.385	ENSECAG00000020206	POP4	76	90.385	Equus_caballus
ENSVVUG00000016876	-	69	66.497	ENSEEUG00000013109	POP4	99	66.497	Erinaceus_europaeus
ENSVVUG00000016876	-	69	62.755	ENSELUG00000019812	pop4	89	62.755	Esox_lucius
ENSVVUG00000016876	-	71	91.089	ENSFCAG00000001619	POP4	92	91.089	Felis_catus
ENSVVUG00000016876	-	74	69.014	ENSFALG00000000206	POP4	94	69.014	Ficedula_albicollis
ENSVVUG00000016876	-	71	88.614	ENSFDAG00000017859	POP4	92	88.614	Fukomys_damarensis
ENSVVUG00000016876	-	72	55.024	ENSFHEG00000012745	pop4	94	54.067	Fundulus_heteroclitus
ENSVVUG00000016876	-	67	63.402	ENSGMOG00000000335	pop4	96	62.887	Gadus_morhua
ENSVVUG00000016876	-	79	64.758	ENSGALG00000041972	POP4	94	64.758	Gallus_gallus
ENSVVUG00000016876	-	56	51.829	ENSGAFG00000003571	pop4	92	51.807	Gambusia_affinis
ENSVVUG00000016876	-	72	59.615	ENSGACG00000014510	pop4	93	65.698	Gasterosteus_aculeatus
ENSVVUG00000016876	-	73	73.558	ENSGAGG00000024544	POP4	75	73.558	Gopherus_agassizii
ENSVVUG00000016876	-	71	89.604	ENSGGOG00000038346	POP4	92	89.604	Gorilla_gorilla
ENSVVUG00000016876	-	68	62.437	ENSHBUG00000021821	pop4	88	61.026	Haplochromis_burtoni
ENSVVUG00000016876	-	71	87.624	ENSHGLG00000015798	POP4	92	87.624	Heterocephalus_glaber_female
ENSVVUG00000016876	-	71	87.624	ENSHGLG00100009737	POP4	92	87.624	Heterocephalus_glaber_male
ENSVVUG00000016876	-	68	61.538	ENSHCOG00000020937	pop4	88	61.538	Hippocampus_comes
ENSVVUG00000016876	-	72	59.903	ENSIPUG00000013652	pop4	94	59.903	Ictalurus_punctatus
ENSVVUG00000016876	-	71	90.594	ENSSTOG00000011016	POP4	92	90.594	Ictidomys_tridecemlineatus
ENSVVUG00000016876	-	71	89.109	ENSJJAG00000013376	Pop4	92	89.109	Jaculus_jaculus
ENSVVUG00000016876	-	69	63.000	ENSKMAG00000012250	pop4	90	62.000	Kryptolebias_marmoratus
ENSVVUG00000016876	-	77	55.856	ENSLBEG00000018846	-	95	55.856	Labrus_bergylta
ENSVVUG00000016876	-	77	55.856	ENSLBEG00000014139	pop4	95	55.856	Labrus_bergylta
ENSVVUG00000016876	-	73	65.385	ENSLACG00000008581	POP4	93	65.385	Latimeria_chalumnae
ENSVVUG00000016876	-	71	71.287	ENSLOCG00000005597	pop4	92	71.287	Lepisosteus_oculatus
ENSVVUG00000016876	-	71	88.614	ENSLAFG00000000084	POP4	92	88.614	Loxodonta_africana
ENSVVUG00000016876	-	71	89.604	ENSMFAG00000029606	POP4	92	89.604	Macaca_fascicularis
ENSVVUG00000016876	-	71	88.177	ENSMMUG00000017424	POP4	92	87.685	Macaca_mulatta
ENSVVUG00000016876	-	71	88.670	ENSMNEG00000031374	POP4	92	88.177	Macaca_nemestrina
ENSVVUG00000016876	-	71	89.604	ENSMLEG00000043454	POP4	92	89.604	Mandrillus_leucophaeus
ENSVVUG00000016876	-	65	64.894	ENSMAMG00000011716	pop4	88	62.944	Mastacembelus_armatus
ENSVVUG00000016876	-	68	62.437	ENSMZEG00005002360	pop4	88	61.026	Maylandia_zebra
ENSVVUG00000016876	-	76	67.281	ENSMGAG00000005337	POP4	95	67.281	Meleagris_gallopavo
ENSVVUG00000016876	-	71	84.653	ENSMAUG00000020110	Pop4	92	84.653	Mesocricetus_auratus
ENSVVUG00000016876	-	71	85.784	ENSMICG00000035730	POP4	91	85.784	Microcebus_murinus
ENSVVUG00000016876	-	72	60.194	ENSMMOG00000015321	pop4	93	60.194	Mola_mola
ENSVVUG00000016876	-	79	69.469	ENSMODG00000029406	POP4	98	69.469	Monodelphis_domestica
ENSVVUG00000016876	-	72	60.870	ENSMALG00000012571	pop4	94	60.870	Monopterus_albus
ENSVVUG00000016876	-	71	81.773	MGP_CAROLIEiJ_G0029600	Pop4	92	82.759	Mus_caroli
ENSVVUG00000016876	-	71	81.773	ENSMUSG00000030423	Pop4	92	81.773	Mus_musculus
ENSVVUG00000016876	-	71	82.178	MGP_SPRETEiJ_G0030699	Pop4	92	81.683	Mus_spretus
ENSVVUG00000016876	-	71	90.686	ENSMPUG00000008041	-	93	90.686	Mustela_putorius_furo
ENSVVUG00000016876	-	71	78.325	ENSMPUG00000008063	-	92	78.325	Mustela_putorius_furo
ENSVVUG00000016876	-	71	68.966	ENSMLUG00000010774	POP4	92	68.966	Myotis_lucifugus
ENSVVUG00000016876	-	69	88.889	ENSOPRG00000004736	POP4	99	88.889	Ochotona_princeps
ENSVVUG00000016876	-	71	87.129	ENSODEG00000013025	POP4	95	87.129	Octodon_degus
ENSVVUG00000016876	-	68	61.026	ENSONIG00000003458	pop4	87	61.026	Oreochromis_niloticus
ENSVVUG00000016876	-	76	84.332	ENSOCUG00000015974	POP4	97	84.332	Oryctolagus_cuniculus
ENSVVUG00000016876	-	68	60.914	ENSORLG00000020317	pop4	89	59.898	Oryzias_latipes
ENSVVUG00000016876	-	72	58.173	ENSORLG00015011624	pop4	93	57.212	Oryzias_latipes_hsok
ENSVVUG00000016876	-	69	60.804	ENSOMEG00000002538	pop4	89	59.799	Oryzias_melastigma
ENSVVUG00000016876	-	71	88.119	ENSOGAG00000011168	POP4	92	88.119	Otolemur_garnettii
ENSVVUG00000016876	-	70	91.045	ENSOARG00000004041	POP4	91	91.045	Ovis_aries
ENSVVUG00000016876	-	71	89.604	ENSPPAG00000040372	POP4	92	89.604	Pan_paniscus
ENSVVUG00000016876	-	71	91.089	ENSPPRG00000010502	POP4	92	91.089	Panthera_pardus
ENSVVUG00000016876	-	71	91.089	ENSPTIG00000016598	POP4	92	91.089	Panthera_tigris_altaica
ENSVVUG00000016876	-	71	89.604	ENSPTRG00000010779	POP4	92	89.604	Pan_troglodytes
ENSVVUG00000016876	-	71	89.604	ENSPANG00000008546	POP4	92	89.604	Papio_anubis
ENSVVUG00000016876	-	72	67.143	ENSPKIG00000004468	pop4	92	67.143	Paramormyrops_kingsleyae
ENSVVUG00000016876	-	73	74.038	ENSPSIG00000015690	POP4	98	76.263	Pelodiscus_sinensis
ENSVVUG00000016876	-	69	57.635	ENSPMGG00000008608	pop4	97	57.143	Periophthalmus_magnuspinnatus
ENSVVUG00000016876	-	71	83.168	ENSPEMG00000014034	-	91	84.184	Peromyscus_maniculatus_bairdii
ENSVVUG00000016876	-	71	69.307	ENSPEMG00000019982	-	92	69.307	Peromyscus_maniculatus_bairdii
ENSVVUG00000016876	-	64	56.566	ENSPMAG00000006265	pop4	100	55.556	Petromyzon_marinus
ENSVVUG00000016876	-	71	77.723	ENSPCIG00000024738	POP4	87	77.723	Phascolarctos_cinereus
ENSVVUG00000016876	-	71	58.333	ENSPFOG00000000925	pop4	91	58.333	Poecilia_formosa
ENSVVUG00000016876	-	71	58.333	ENSPLAG00000003161	pop4	91	58.333	Poecilia_latipinna
ENSVVUG00000016876	-	71	58.333	ENSPMEG00000002475	pop4	91	58.333	Poecilia_mexicana
ENSVVUG00000016876	-	69	58.291	ENSPREG00000022403	pop4	86	58.291	Poecilia_reticulata
ENSVVUG00000016876	-	71	90.099	ENSPPYG00000009805	POP4	92	90.099	Pongo_abelii
ENSVVUG00000016876	-	69	80.808	ENSPCAG00000007737	POP4	90	80.808	Procavia_capensis
ENSVVUG00000016876	-	71	90.594	ENSPCOG00000018055	POP4	92	90.594	Propithecus_coquereli
ENSVVUG00000016876	-	71	88.614	ENSPVAG00000006069	POP4	92	88.614	Pteropus_vampyrus
ENSVVUG00000016876	-	68	62.944	ENSPNYG00000020038	pop4	88	61.538	Pundamilia_nyererei
ENSVVUG00000016876	-	72	62.136	ENSPNAG00000005591	pop4	94	62.136	Pygocentrus_nattereri
ENSVVUG00000016876	-	71	83.251	ENSRNOG00000027646	Pop4	92	84.236	Rattus_norvegicus
ENSVVUG00000016876	-	56	85.535	ENSRBIG00000044769	POP4	89	86.957	Rhinopithecus_bieti
ENSVVUG00000016876	-	71	89.109	ENSRROG00000028903	POP4	92	89.109	Rhinopithecus_roxellana
ENSVVUG00000016876	-	71	88.614	ENSSBOG00000032445	POP4	92	88.614	Saimiri_boliviensis_boliviensis
ENSVVUG00000016876	-	71	78.218	ENSSHAG00000016888	POP4	92	78.218	Sarcophilus_harrisii
ENSVVUG00000016876	-	76	64.220	ENSSFOG00015014556	pop4	96	62.844	Scleropages_formosus
ENSVVUG00000016876	-	69	62.814	ENSSMAG00000016611	pop4	93	61.809	Scophthalmus_maximus
ENSVVUG00000016876	-	73	58.559	ENSSDUG00000019865	pop4	89	57.658	Seriola_dumerili
ENSVVUG00000016876	-	73	58.559	ENSSLDG00000001763	pop4	99	57.658	Seriola_lalandi_dorsalis
ENSVVUG00000016876	-	71	87.745	ENSSARG00000004748	POP4	94	87.745	Sorex_araneus
ENSVVUG00000016876	-	73	60.664	ENSSPAG00000014364	pop4	94	59.716	Stegastes_partitus
ENSVVUG00000016876	-	71	89.109	ENSSSCG00000002854	POP4	92	89.109	Sus_scrofa
ENSVVUG00000016876	-	69	72.222	ENSTGUG00000008953	POP4	99	72.222	Taeniopygia_guttata
ENSVVUG00000016876	-	68	62.121	ENSTNIG00000006401	pop4	97	60.714	Tetraodon_nigroviridis
ENSVVUG00000016876	-	71	86.700	ENSTBEG00000002194	POP4	92	89.163	Tupaia_belangeri
ENSVVUG00000016876	-	71	88.614	ENSTTRG00000005882	POP4	92	88.614	Tursiops_truncatus
ENSVVUG00000016876	-	71	91.584	ENSUAMG00000003049	-	92	91.584	Ursus_americanus
ENSVVUG00000016876	-	71	91.584	ENSUMAG00000007522	-	92	91.584	Ursus_maritimus
ENSVVUG00000016876	-	71	67.327	ENSXETG00000017598	pop4	92	67.327	Xenopus_tropicalis
ENSVVUG00000016876	-	69	58.209	ENSXCOG00000017695	pop4	86	57.711	Xiphophorus_couchianus
ENSVVUG00000016876	-	69	58.209	ENSXMAG00000013862	pop4	86	57.711	Xiphophorus_maculatus