EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000017246 (Gene tree)
Gene ID: -
Gene Symbol: RBM38
Alias: HSRNASEB|RNPC1|SEB4D|dJ800J21.2|seb4B
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 14634 bases
Position: chrNBDQ01000109.1:5527957-5542590
Accession: 112932202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000023547	RRM_1	PF00076.22	1.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000031149	RBM38-201	2046	XM_026015063	ENSVVUP00000023547	239 (aa)	XP_025870848	UPI000DC6B27D

Gene Model

Click here to download ENSVVUG00000017246's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000017246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000017246	RBM38	79	34.426	ENSVVUG00000020993	MSI1	84	32.836

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000017246	RBM38	100	95.816	ENSG00000132819	RBM38	100	98.347	Homo_sapiens
ENSVVUG00000017246	RBM38	89	59.483	ENSAPOG00000003301	rbm38	91	59.483	Acanthochromis_polyacanthus
ENSVVUG00000017246	RBM38	91	68.018	ENSAPOG00000009939	-	94	69.369	Acanthochromis_polyacanthus
ENSVVUG00000017246	RBM38	89	70.642	ENSACIG00000012502	-	100	88.034	Amphilophus_citrinellus
ENSVVUG00000017246	RBM38	89	57.511	ENSACIG00000000010	rbm38	91	57.511	Amphilophus_citrinellus
ENSVVUG00000017246	RBM38	90	59.072	ENSAOCG00000013497	-	93	59.072	Amphiprion_ocellaris
ENSVVUG00000017246	RBM38	99	64.198	ENSAOCG00000012559	RBM38	99	65.021	Amphiprion_ocellaris
ENSVVUG00000017246	RBM38	99	60.656	ENSAPEG00000013137	rbm38	99	60.656	Amphiprion_percula
ENSVVUG00000017246	RBM38	91	64.854	ENSAPEG00000023581	-	95	65.823	Amphiprion_percula
ENSVVUG00000017246	RBM38	89	66.234	ENSATEG00000016710	-	92	67.100	Anabas_testudineus
ENSVVUG00000017246	RBM38	90	60.268	ENSATEG00000016366	rbm38	94	60.268	Anabas_testudineus
ENSVVUG00000017246	RBM38	91	79.091	ENSACAG00000016238	RBM38	97	75.424	Anolis_carolinensis
ENSVVUG00000017246	RBM38	90	95.370	ENSANAG00000031959	RBM38	100	99.174	Aotus_nancymaae
ENSVVUG00000017246	RBM38	89	67.532	ENSACLG00000019514	-	92	67.532	Astatotilapia_calliptera
ENSVVUG00000017246	RBM38	91	69.130	ENSAMXG00000015601	-	95	70.000	Astyanax_mexicanus
ENSVVUG00000017246	RBM38	88	58.108	ENSAMXG00000038120	rbm38	92	58.559	Astyanax_mexicanus
ENSVVUG00000017246	RBM38	100	95.397	ENSBTAG00000008105	RBM38	100	95.397	Bos_taurus
ENSVVUG00000017246	RBM38	58	60.870	WBGene00006321	sup-12	59	84.270	Caenorhabditis_elegans
ENSVVUG00000017246	RBM38	100	95.816	ENSCJAG00000019139	RBM38	100	99.174	Callithrix_jacchus
ENSVVUG00000017246	RBM38	100	100.000	ENSCAFG00020021943	RBM38	100	100.000	Canis_lupus_dingo
ENSVVUG00000017246	RBM38	100	94.561	ENSCHIG00000002609	RBM38	100	94.561	Capra_hircus
ENSVVUG00000017246	RBM38	100	96.234	ENSCPOG00000012781	RBM38	100	96.234	Cavia_porcellus
ENSVVUG00000017246	RBM38	100	95.816	ENSCCAG00000036872	RBM38	100	99.174	Cebus_capucinus
ENSVVUG00000017246	RBM38	100	95.397	ENSCATG00000032133	RBM38	100	99.174	Cercocebus_atys
ENSVVUG00000017246	RBM38	96	95.217	ENSCLAG00000005906	RBM38	100	95.217	Chinchilla_lanigera
ENSVVUG00000017246	RBM38	100	95.397	ENSCSAG00000015503	RBM38	100	95.397	Chlorocebus_sabaeus
ENSVVUG00000017246	RBM38	90	83.028	ENSCPBG00000024059	RBM38	100	83.028	Chrysemys_picta_bellii
ENSVVUG00000017246	RBM38	99	72.689	ENSCANG00000030105	-	89	72.689	Colobus_angolensis_palliatus
ENSVVUG00000017246	RBM38	100	91.213	ENSCGRG00001012928	Rbm38	100	91.213	Cricetulus_griseus_chok1gshd
ENSVVUG00000017246	RBM38	76	60.870	ENSCSEG00000020943	rbm38	60	60.870	Cynoglossus_semilaevis
ENSVVUG00000017246	RBM38	89	70.183	ENSCSEG00000004701	-	93	70.776	Cynoglossus_semilaevis
ENSVVUG00000017246	RBM38	89	68.103	ENSCVAG00000005472	-	92	68.376	Cyprinodon_variegatus
ENSVVUG00000017246	RBM38	88	58.621	ENSCVAG00000015952	rbm38	91	59.227	Cyprinodon_variegatus
ENSVVUG00000017246	RBM38	88	65.919	ENSDARG00000058818	rbm38	92	65.919	Danio_rerio
ENSVVUG00000017246	RBM38	90	90.278	ENSDNOG00000032004	RBM38	100	90.278	Dasypus_novemcinctus
ENSVVUG00000017246	RBM38	61	67.123	ENSEBUG00000015164	rbm38	88	67.123	Eptatretus_burgeri
ENSVVUG00000017246	RBM38	100	96.234	ENSECAG00000007700	RBM38	100	96.234	Equus_caballus
ENSVVUG00000017246	RBM38	100	92.500	ENSEEUG00000013489	RBM38	100	93.750	Erinaceus_europaeus
ENSVVUG00000017246	RBM38	84	64.677	ENSELUG00000000585	-	87	64.677	Esox_lucius
ENSVVUG00000017246	RBM38	90	66.949	ENSELUG00000005849	-	95	66.949	Esox_lucius
ENSVVUG00000017246	RBM38	100	97.490	ENSFCAG00000042916	RBM38	100	99.174	Felis_catus
ENSVVUG00000017246	RBM38	74	83.146	ENSFALG00000010805	RBM38	93	83.240	Ficedula_albicollis
ENSVVUG00000017246	RBM38	89	73.023	ENSFHEG00000006160	-	92	73.023	Fundulus_heteroclitus
ENSVVUG00000017246	RBM38	89	57.511	ENSFHEG00000017748	rbm38	91	57.511	Fundulus_heteroclitus
ENSVVUG00000017246	RBM38	75	73.626	ENSGMOG00000016655	-	96	75.275	Gadus_morhua
ENSVVUG00000017246	RBM38	90	81.193	ENSGALG00000026081	RBM38	100	81.193	Gallus_gallus
ENSVVUG00000017246	RBM38	90	68.304	ENSGACG00000009873	-	100	68.304	Gasterosteus_aculeatus
ENSVVUG00000017246	RBM38	89	63.679	ENSGACG00000015224	rbm38	98	63.679	Gasterosteus_aculeatus
ENSVVUG00000017246	RBM38	90	83.486	ENSGAGG00000001187	RBM38	100	83.486	Gopherus_agassizii
ENSVVUG00000017246	RBM38	96	58.577	ENSHBUG00000012058	rbm38	98	58.577	Haplochromis_burtoni
ENSVVUG00000017246	RBM38	89	72.018	ENSHBUG00000011778	-	92	72.018	Haplochromis_burtoni
ENSVVUG00000017246	RBM38	100	92.050	ENSHGLG00000015077	RBM38	100	92.050	Heterocephalus_glaber_female
ENSVVUG00000017246	RBM38	69	62.874	ENSHCOG00000019040	rbm38	70	62.874	Hippocampus_comes
ENSVVUG00000017246	RBM38	79	72.917	ENSHCOG00000005622	-	54	73.958	Hippocampus_comes
ENSVVUG00000017246	RBM38	91	67.241	ENSIPUG00000019349	-	95	67.241	Ictalurus_punctatus
ENSVVUG00000017246	RBM38	88	54.237	ENSKMAG00000012402	rbm38	98	54.661	Kryptolebias_marmoratus
ENSVVUG00000017246	RBM38	89	70.183	ENSLBEG00000016163	RBM38	92	71.101	Labrus_bergylta
ENSVVUG00000017246	RBM38	89	58.369	ENSLBEG00000018878	rbm38	91	58.369	Labrus_bergylta
ENSVVUG00000017246	RBM38	91	72.444	ENSLOCG00000003456	rbm38	95	72.444	Lepisosteus_oculatus
ENSVVUG00000017246	RBM38	98	95.319	ENSMFAG00000043808	RBM38	97	99.145	Macaca_fascicularis
ENSVVUG00000017246	RBM38	100	95.397	ENSMMUG00000031391	RBM38	100	99.174	Macaca_mulatta
ENSVVUG00000017246	RBM38	100	95.397	ENSMNEG00000034683	RBM38	100	99.174	Macaca_nemestrina
ENSVVUG00000017246	RBM38	91	65.966	ENSMAMG00000020499	RBM38	95	67.511	Mastacembelus_armatus
ENSVVUG00000017246	RBM38	89	59.227	ENSMAMG00000024135	rbm38	91	59.227	Mastacembelus_armatus
ENSVVUG00000017246	RBM38	89	72.018	ENSMZEG00005000849	-	92	72.018	Maylandia_zebra
ENSVVUG00000017246	RBM38	90	57.563	ENSMZEG00005026036	rbm38	93	57.563	Maylandia_zebra
ENSVVUG00000017246	RBM38	100	91.632	ENSMAUG00000021211	Rbm38	100	91.632	Mesocricetus_auratus
ENSVVUG00000017246	RBM38	90	96.759	ENSMICG00000038011	RBM38	100	96.759	Microcebus_murinus
ENSVVUG00000017246	RBM38	100	90.795	ENSMOCG00000008715	Rbm38	100	90.795	Microtus_ochrogaster
ENSVVUG00000017246	RBM38	99	67.782	ENSMMOG00000020051	-	99	67.782	Mola_mola
ENSVVUG00000017246	RBM38	100	80.913	ENSMODG00000016458	RBM38	100	80.913	Monodelphis_domestica
ENSVVUG00000017246	RBM38	64	69.677	ENSMALG00000022327	rbm38	67	69.677	Monopterus_albus
ENSVVUG00000017246	RBM38	77	75.132	ENSMALG00000004680	RBM38	70	75.132	Monopterus_albus
ENSVVUG00000017246	RBM38	100	91.213	MGP_CAROLIEiJ_G0024745	Rbm38	100	91.213	Mus_caroli
ENSVVUG00000017246	RBM38	100	91.632	ENSMUSG00000027510	Rbm38	100	91.632	Mus_musculus
ENSVVUG00000017246	RBM38	100	91.213	MGP_PahariEiJ_G0026186	Rbm38	100	91.213	Mus_pahari
ENSVVUG00000017246	RBM38	100	91.213	MGP_SPRETEiJ_G0025665	Rbm38	100	91.213	Mus_spretus
ENSVVUG00000017246	RBM38	78	98.930	ENSMPUG00000006518	RBM38	93	98.930	Mustela_putorius_furo
ENSVVUG00000017246	RBM38	90	90.741	ENSMLUG00000011140	RBM38	100	90.741	Myotis_lucifugus
ENSVVUG00000017246	RBM38	96	60.000	ENSNBRG00000022685	rbm38	98	60.000	Neolamprologus_brichardi
ENSVVUG00000017246	RBM38	89	68.103	ENSNBRG00000022545	-	92	68.103	Neolamprologus_brichardi
ENSVVUG00000017246	RBM38	58	79.710	ENSMEUG00000005475	-	100	79.710	Notamacropus_eugenii
ENSVVUG00000017246	RBM38	100	95.397	ENSODEG00000007980	RBM38	100	95.397	Octodon_degus
ENSVVUG00000017246	RBM38	90	57.806	ENSONIG00000017073	rbm38	95	57.806	Oreochromis_niloticus
ENSVVUG00000017246	RBM38	88	67.965	ENSONIG00000020324	-	92	67.965	Oreochromis_niloticus
ENSVVUG00000017246	RBM38	97	79.741	ENSOANG00000009259	RBM38	90	78.814	Ornithorhynchus_anatinus
ENSVVUG00000017246	RBM38	89	63.948	ENSORLG00000027180	-	92	65.665	Oryzias_latipes
ENSVVUG00000017246	RBM38	89	56.410	ENSORLG00000012154	rbm38	91	55.556	Oryzias_latipes
ENSVVUG00000017246	RBM38	91	62.249	ENSORLG00020020751	-	95	63.306	Oryzias_latipes_hni
ENSVVUG00000017246	RBM38	90	56.067	ENSORLG00020017871	rbm38	93	56.067	Oryzias_latipes_hni
ENSVVUG00000017246	RBM38	89	64.807	ENSORLG00015017040	-	92	65.948	Oryzias_latipes_hsok
ENSVVUG00000017246	RBM38	97	57.872	ENSORLG00015012606	rbm38	97	57.872	Oryzias_latipes_hsok
ENSVVUG00000017246	RBM38	89	65.086	ENSOMEG00000023912	-	92	65.801	Oryzias_melastigma
ENSVVUG00000017246	RBM38	89	55.983	ENSOMEG00000006805	rbm38	91	55.983	Oryzias_melastigma
ENSVVUG00000017246	RBM38	100	95.417	ENSOGAG00000029136	RBM38	100	95.417	Otolemur_garnettii
ENSVVUG00000017246	RBM38	100	97.490	ENSPPRG00000009507	RBM38	100	99.174	Panthera_pardus
ENSVVUG00000017246	RBM38	87	93.269	ENSPTRG00000013661	RBM38	100	98.347	Pan_troglodytes
ENSVVUG00000017246	RBM38	52	99.194	ENSPTRG00000045845	-	68	99.194	Pan_troglodytes
ENSVVUG00000017246	RBM38	100	95.397	ENSPANG00000020919	-	100	99.174	Papio_anubis
ENSVVUG00000017246	RBM38	99	72.269	ENSPANG00000033127	-	100	72.269	Papio_anubis
ENSVVUG00000017246	RBM38	94	64.754	ENSPKIG00000025417	rbm38	98	64.754	Paramormyrops_kingsleyae
ENSVVUG00000017246	RBM38	91	68.282	ENSPKIG00000018122	-	100	87.179	Paramormyrops_kingsleyae
ENSVVUG00000017246	RBM38	93	82.143	ENSPSIG00000011649	RBM38	95	82.143	Pelodiscus_sinensis
ENSVVUG00000017246	RBM38	90	55.649	ENSPMGG00000011343	rbm38	94	56.904	Periophthalmus_magnuspinnatus
ENSVVUG00000017246	RBM38	89	63.830	ENSPMGG00000017094	-	92	64.681	Periophthalmus_magnuspinnatus
ENSVVUG00000017246	RBM38	100	80.083	ENSPCIG00000013648	RBM38	100	80.083	Phascolarctos_cinereus
ENSVVUG00000017246	RBM38	89	56.838	ENSPFOG00000011658	rbm38	91	57.692	Poecilia_formosa
ENSVVUG00000017246	RBM38	89	68.220	ENSPLAG00000002500	-	92	68.936	Poecilia_latipinna
ENSVVUG00000017246	RBM38	89	56.410	ENSPLAG00000005218	rbm38	91	57.692	Poecilia_latipinna
ENSVVUG00000017246	RBM38	89	56.838	ENSPMEG00000015770	rbm38	91	57.692	Poecilia_mexicana
ENSVVUG00000017246	RBM38	89	57.265	ENSPREG00000007398	rbm38	91	58.120	Poecilia_reticulata
ENSVVUG00000017246	RBM38	100	95.833	ENSPCOG00000026201	RBM38	100	98.361	Propithecus_coquereli
ENSVVUG00000017246	RBM38	100	66.946	ENSPVAG00000006457	RBM38	100	66.946	Pteropus_vampyrus
ENSVVUG00000017246	RBM38	96	58.650	ENSPNYG00000021373	rbm38	98	58.996	Pundamilia_nyererei
ENSVVUG00000017246	RBM38	89	72.018	ENSPNYG00000019727	-	100	88.889	Pundamilia_nyererei
ENSVVUG00000017246	RBM38	89	63.839	ENSPNAG00000010596	rbm38	93	63.839	Pygocentrus_nattereri
ENSVVUG00000017246	RBM38	91	69.130	ENSPNAG00000015123	-	96	77.273	Pygocentrus_nattereri
ENSVVUG00000017246	RBM38	100	91.632	ENSRNOG00000006420	Rbm38	100	91.632	Rattus_norvegicus
ENSVVUG00000017246	RBM38	100	77.406	ENSRROG00000036388	-	100	77.406	Rhinopithecus_roxellana
ENSVVUG00000017246	RBM38	90	94.907	ENSSBOG00000031053	RBM38	100	99.065	Saimiri_boliviensis_boliviensis
ENSVVUG00000017246	RBM38	89	67.273	ENSSFOG00015004453	rbm38	92	70.455	Scleropages_formosus
ENSVVUG00000017246	RBM38	89	60.515	ENSSDUG00000022611	rbm38	91	60.515	Seriola_dumerili
ENSVVUG00000017246	RBM38	89	67.241	ENSSDUG00000021082	RBM38	92	67.672	Seriola_dumerili
ENSVVUG00000017246	RBM38	89	63.256	ENSSLDG00000010845	rbm38	90	63.256	Seriola_lalandi_dorsalis
ENSVVUG00000017246	RBM38	89	67.241	ENSSLDG00000011778	RBM38	92	67.672	Seriola_lalandi_dorsalis
ENSVVUG00000017246	RBM38	89	69.626	ENSSPAG00000020989	RBM38	91	70.561	Stegastes_partitus
ENSVVUG00000017246	RBM38	89	59.227	ENSSPAG00000011113	rbm38	91	59.227	Stegastes_partitus
ENSVVUG00000017246	RBM38	100	97.908	ENSSSCG00000007504	RBM38	100	97.908	Sus_scrofa
ENSVVUG00000017246	RBM38	89	56.769	ENSTRUG00000024954	rbm38	91	56.332	Takifugu_rubripes
ENSVVUG00000017246	RBM38	89	64.935	ENSTRUG00000019869	-	92	66.379	Takifugu_rubripes
ENSVVUG00000017246	RBM38	89	68.636	ENSTNIG00000007093	-	97	69.683	Tetraodon_nigroviridis
ENSVVUG00000017246	RBM38	50	89.076	ENSTBEG00000001689	-	50	89.076	Tupaia_belangeri
ENSVVUG00000017246	RBM38	100	97.908	ENSUAMG00000019780	RBM38	100	97.908	Ursus_americanus
ENSVVUG00000017246	RBM38	92	74.222	ENSXETG00000011268	rbm38	100	74.667	Xenopus_tropicalis
ENSVVUG00000017246	RBM38	89	57.940	ENSXMAG00000023662	rbm38	91	57.940	Xiphophorus_maculatus