EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000017311 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 371978 bases
Position: chrNBDQ01000045.1:3287490-3659467
Accession: 112923297
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000023632	Fox-1_C	PF12414.8	1.2e-42	1	1
ENSVVUP00000023627	Fox-1_C	PF12414.8	1.8e-42	1	1
ENSVVUP00000023660	Fox-1_C	PF12414.8	2.5e-40	1	1
ENSVVUP00000023652	Fox-1_C	PF12414.8	4.9e-21	1	1
ENSVVUP00000023646	Fox-1_C	PF12414.8	1.6e-09	1	1
ENSVVUP00000023652	RRM_1	PF00076.22	3.9e-18	1	1
ENSVVUP00000023660	RRM_1	PF00076.22	4.1e-18	1	1
ENSVVUP00000023646	RRM_1	PF00076.22	4.3e-18	1	1
ENSVVUP00000023632	RRM_1	PF00076.22	4.8e-18	1	1
ENSVVUP00000023627	RRM_1	PF00076.22	5.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000031303	RBFOX1-205	1568	-	ENSVVUP00000023660	376 (aa)	-	-
ENSVVUT00000031273	RBFOX1-202	1827	-	ENSVVUP00000023632	409 (aa)	XP_025858869	UPI000DF6B587
ENSVVUT00000031294	RBFOX1-204	1503	-	ENSVVUP00000023652	347 (aa)	-	-
ENSVVUT00000031287	RBFOX1-203	1613	-	ENSVVUP00000023646	387 (aa)	-	-
ENSVVUT00000031268	RBFOX1-201	1908	-	ENSVVUP00000023627	436 (aa)	XP_025858859	UPI000DF70F57

Gene Model

Click here to download ENSVVUG00000017311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000017311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000017311	RBFOX1	89	70.652	ENSVVUG00000017864	RBFOX3	100	76.825
ENSVVUG00000017311	RBFOX1	90	62.651	ENSVVUG00000023561	RBFOX2	100	62.169

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000017311	RBFOX1	98	98.378	ENSG00000078328	RBFOX1	100	98.413	Homo_sapiens
ENSVVUG00000017311	RBFOX1	96	81.840	ENSAPOG00000003197	rbfox1	100	82.324	Acanthochromis_polyacanthus
ENSVVUG00000017311	RBFOX1	63	96.789	ENSAMEG00000008605	RBFOX1	91	95.154	Ailuropoda_melanoleuca
ENSVVUG00000017311	RBFOX1	53	86.559	ENSACIG00000005478	rbfox1	68	72.222	Amphilophus_citrinellus
ENSVVUG00000017311	RBFOX1	75	77.778	ENSAOCG00000008283	rbfox1	96	77.778	Amphiprion_ocellaris
ENSVVUG00000017311	RBFOX1	100	61.869	ENSAPEG00000010636	rbfox1	100	71.816	Amphiprion_percula
ENSVVUG00000017311	RBFOX1	78	74.403	ENSATEG00000007513	rbfox1	100	76.508	Anabas_testudineus
ENSVVUG00000017311	RBFOX1	90	94.656	ENSAPLG00000013263	RBFOX1	98	94.656	Anas_platyrhynchos
ENSVVUG00000017311	RBFOX1	89	88.010	ENSACAG00000004013	RBFOX1	98	88.010	Anolis_carolinensis
ENSVVUG00000017311	RBFOX1	98	98.108	ENSANAG00000029527	RBFOX1	97	98.077	Aotus_nancymaae
ENSVVUG00000017311	RBFOX1	95	76.524	ENSAMXG00000002431	rbfox1	87	76.524	Astyanax_mexicanus
ENSVVUG00000017311	RBFOX1	100	98.670	ENSBTAG00000007210	RBFOX1	100	98.670	Bos_taurus
ENSVVUG00000017311	RBFOX1	98	97.838	ENSCJAG00000017351	RBFOX1	94	98.210	Callithrix_jacchus
ENSVVUG00000017311	RBFOX1	97	97.548	ENSCAFG00000019082	RBFOX1	94	96.962	Canis_familiaris
ENSVVUG00000017311	RBFOX1	97	85.246	ENSCAFG00020024881	RBFOX1	92	84.153	Canis_lupus_dingo
ENSVVUG00000017311	RBFOX1	100	98.670	ENSCHIG00000023549	RBFOX1	100	98.670	Capra_hircus
ENSVVUG00000017311	RBFOX1	97	98.630	ENSTSYG00000005334	RBFOX1	100	98.061	Carlito_syrichta
ENSVVUG00000017311	RBFOX1	89	98.196	ENSCAPG00000017669	RBFOX1	100	98.196	Cavia_aperea
ENSVVUG00000017311	RBFOX1	96	91.148	ENSCPOG00000011314	RBFOX1	99	97.943	Cavia_porcellus
ENSVVUG00000017311	RBFOX1	98	98.108	ENSCCAG00000023031	RBFOX1	97	98.077	Cebus_capucinus
ENSVVUG00000017311	RBFOX1	98	98.378	ENSCATG00000033816	RBFOX1	97	98.626	Cercocebus_atys
ENSVVUG00000017311	RBFOX1	100	97.606	ENSCLAG00000012761	RBFOX1	100	97.606	Chinchilla_lanigera
ENSVVUG00000017311	RBFOX1	100	99.202	ENSCSAG00000008739	RBFOX1	100	99.202	Chlorocebus_sabaeus
ENSVVUG00000017311	RBFOX1	77	96.923	ENSCHOG00000012843	RBFOX1	96	72.569	Choloepus_hoffmanni
ENSVVUG00000017311	RBFOX1	100	94.681	ENSCPBG00000026626	RBFOX1	100	94.681	Chrysemys_picta_bellii
ENSVVUG00000017311	RBFOX1	98	98.378	ENSCANG00000033125	RBFOX1	97	98.626	Colobus_angolensis_palliatus
ENSVVUG00000017311	RBFOX1	96	90.909	ENSCGRG00001013729	Rbfox1	98	97.686	Cricetulus_griseus_chok1gshd
ENSVVUG00000017311	RBFOX1	96	90.909	ENSCGRG00000003272	Rbfox1	98	97.686	Cricetulus_griseus_crigri
ENSVVUG00000017311	RBFOX1	86	77.027	ENSCSEG00000008840	rbfox1	100	77.027	Cynoglossus_semilaevis
ENSVVUG00000017311	RBFOX1	90	87.772	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSVVUG00000017311	RBFOX1	93	96.049	ENSDNOG00000043612	RBFOX1	98	96.049	Dasypus_novemcinctus
ENSVVUG00000017311	RBFOX1	94	91.787	ENSDORG00000010024	Rbfox1	100	93.069	Dipodomys_ordii
ENSVVUG00000017311	RBFOX1	76	94.444	ENSETEG00000003771	RBFOX1	99	73.301	Echinops_telfairi
ENSVVUG00000017311	RBFOX1	100	99.083	ENSEASG00005011599	RBFOX1	100	99.083	Equus_asinus_asinus
ENSVVUG00000017311	RBFOX1	100	98.936	ENSECAG00000012667	RBFOX1	100	98.936	Equus_caballus
ENSVVUG00000017311	RBFOX1	64	91.429	ENSELUG00000013096	rbfox1	87	91.429	Esox_lucius
ENSVVUG00000017311	RBFOX1	100	99.312	ENSFCAG00000025322	RBFOX1	100	99.312	Felis_catus
ENSVVUG00000017311	RBFOX1	86	95.356	ENSFALG00000004027	RBFOX1	100	93.114	Ficedula_albicollis
ENSVVUG00000017311	RBFOX1	96	91.627	ENSFDAG00000007388	RBFOX1	98	98.458	Fukomys_damarensis
ENSVVUG00000017311	RBFOX1	98	95.109	ENSGALG00000034325	RBFOX1	97	95.355	Gallus_gallus
ENSVVUG00000017311	RBFOX1	100	92.042	ENSGAGG00000023681	RBFOX1	100	95.225	Gopherus_agassizii
ENSVVUG00000017311	RBFOX1	98	98.378	ENSGGOG00000016871	-	97	98.626	Gorilla_gorilla
ENSVVUG00000017311	RBFOX1	100	97.872	ENSHGLG00000016944	RBFOX1	100	97.872	Heterocephalus_glaber_female
ENSVVUG00000017311	RBFOX1	100	97.872	ENSHGLG00100003272	RBFOX1	100	97.872	Heterocephalus_glaber_male
ENSVVUG00000017311	RBFOX1	85	68.085	ENSHCOG00000016419	rbfox1	91	76.875	Hippocampus_comes
ENSVVUG00000017311	RBFOX1	100	81.383	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSVVUG00000017311	RBFOX1	100	97.340	ENSSTOG00000000322	RBFOX1	100	97.340	Ictidomys_tridecemlineatus
ENSVVUG00000017311	RBFOX1	96	88.278	ENSJJAG00000002575	Rbfox1	98	94.859	Jaculus_jaculus
ENSVVUG00000017311	RBFOX1	100	64.677	ENSLBEG00000014659	rbfox1	98	78.649	Labrus_bergylta
ENSVVUG00000017311	RBFOX1	91	86.432	ENSLOCG00000006675	rbfox1	100	86.432	Lepisosteus_oculatus
ENSVVUG00000017311	RBFOX1	70	98.701	ENSLAFG00000011480	RBFOX1	100	98.701	Loxodonta_africana
ENSVVUG00000017311	RBFOX1	98	98.108	ENSMFAG00000036447	RBFOX1	97	98.352	Macaca_fascicularis
ENSVVUG00000017311	RBFOX1	98	99.187	ENSMMUG00000003458	RBFOX1	99	99.187	Macaca_mulatta
ENSVVUG00000017311	RBFOX1	100	98.936	ENSMNEG00000032034	RBFOX1	94	96.429	Macaca_nemestrina
ENSVVUG00000017311	RBFOX1	98	98.378	ENSMLEG00000015382	RBFOX1	97	98.626	Mandrillus_leucophaeus
ENSVVUG00000017311	RBFOX1	86	80.822	ENSMAMG00000003142	rbfox1	100	81.370	Mastacembelus_armatus
ENSVVUG00000017311	RBFOX1	77	89.347	ENSMGAG00000008606	RBFOX1	98	89.161	Meleagris_gallopavo
ENSVVUG00000017311	RBFOX1	100	54.381	ENSMAUG00000020570	Rbfox1	96	57.292	Mesocricetus_auratus
ENSVVUG00000017311	RBFOX1	100	96.552	ENSMICG00000034286	RBFOX1	100	96.552	Microcebus_murinus
ENSVVUG00000017311	RBFOX1	96	90.909	ENSMOCG00000020932	Rbfox1	100	97.917	Microtus_ochrogaster
ENSVVUG00000017311	RBFOX1	76	78.846	ENSMMOG00000009716	rbfox1	86	78.205	Mola_mola
ENSVVUG00000017311	RBFOX1	94	97.740	ENSMODG00000005826	RBFOX1	100	97.740	Monodelphis_domestica
ENSVVUG00000017311	RBFOX1	99	80.815	ENSMALG00000003337	rbfox1	100	80.260	Monopterus_albus
ENSVVUG00000017311	RBFOX1	100	97.074	MGP_CAROLIEiJ_G0020427	Rbfox1	98	97.943	Mus_caroli
ENSVVUG00000017311	RBFOX1	90	97.187	ENSMUSG00000008658	Rbfox1	98	97.686	Mus_musculus
ENSVVUG00000017311	RBFOX1	100	96.809	MGP_PahariEiJ_G0016135	Rbfox1	98	97.943	Mus_pahari
ENSVVUG00000017311	RBFOX1	100	96.543	MGP_SPRETEiJ_G0021321	Rbfox1	98	97.429	Mus_spretus
ENSVVUG00000017311	RBFOX1	97	99.180	ENSMPUG00000014822	RBFOX1	93	99.180	Mustela_putorius_furo
ENSVVUG00000017311	RBFOX1	70	99.349	ENSMLUG00000015896	RBFOX1	100	99.349	Myotis_lucifugus
ENSVVUG00000017311	RBFOX1	92	95.782	ENSNGAG00000023276	Rbfox1	100	98.711	Nannospalax_galili
ENSVVUG00000017311	RBFOX1	71	81.609	ENSNBRG00000011084	rbfox1	95	62.871	Neolamprologus_brichardi
ENSVVUG00000017311	RBFOX1	98	98.108	ENSNLEG00000010017	-	97	98.352	Nomascus_leucogenys
ENSVVUG00000017311	RBFOX1	76	97.835	ENSMEUG00000012525	RBFOX1	93	78.406	Notamacropus_eugenii
ENSVVUG00000017311	RBFOX1	80	95.175	ENSOPRG00000006199	-	79	95.175	Ochotona_princeps
ENSVVUG00000017311	RBFOX1	96	90.431	ENSODEG00000013166	RBFOX1	98	97.172	Octodon_degus
ENSVVUG00000017311	RBFOX1	100	96.543	ENSOANG00000002379	RBFOX1	100	96.543	Ornithorhynchus_anatinus
ENSVVUG00000017311	RBFOX1	64	94.595	ENSOCUG00000001205	-	99	94.595	Oryctolagus_cuniculus
ENSVVUG00000017311	RBFOX1	89	98.458	ENSOGAG00000025535	RBFOX1	98	98.458	Otolemur_garnettii
ENSVVUG00000017311	RBFOX1	65	86.885	ENSOARG00000005135	RBFOX1	99	85.542	Ovis_aries
ENSVVUG00000017311	RBFOX1	98	98.378	ENSPPAG00000036238	-	100	98.969	Pan_paniscus
ENSVVUG00000017311	RBFOX1	98	98.378	ENSPPRG00000006546	RBFOX1	98	98.638	Panthera_pardus
ENSVVUG00000017311	RBFOX1	100	86.563	ENSPTIG00000021154	RBFOX1	100	86.480	Panthera_tigris_altaica
ENSVVUG00000017311	RBFOX1	98	98.378	ENSPTRG00000007744	RBFOX1	97	98.626	Pan_troglodytes
ENSVVUG00000017311	RBFOX1	98	98.378	ENSPANG00000026500	RBFOX1	97	98.626	Papio_anubis
ENSVVUG00000017311	RBFOX1	87	90.066	ENSPKIG00000019353	rbfox1	99	88.599	Paramormyrops_kingsleyae
ENSVVUG00000017311	RBFOX1	94	88.402	ENSPKIG00000009667	-	95	90.909	Paramormyrops_kingsleyae
ENSVVUG00000017311	RBFOX1	90	94.885	ENSPSIG00000006523	RBFOX1	98	94.885	Pelodiscus_sinensis
ENSVVUG00000017311	RBFOX1	96	91.148	ENSPEMG00000017607	Rbfox1	98	97.943	Peromyscus_maniculatus_bairdii
ENSVVUG00000017311	RBFOX1	71	92.884	ENSPCIG00000026887	RBFOX1	100	92.759	Phascolarctos_cinereus
ENSVVUG00000017311	RBFOX1	97	99.454	ENSPPYG00000007079	-	93	99.454	Pongo_abelii
ENSVVUG00000017311	RBFOX1	88	85.241	ENSPCAG00000002630	RBFOX1	96	85.596	Procavia_capensis
ENSVVUG00000017311	RBFOX1	98	97.838	ENSPCOG00000025687	RBFOX1	98	97.548	Propithecus_coquereli
ENSVVUG00000017311	RBFOX1	90	92.092	ENSPVAG00000013467	RBFOX1	94	91.646	Pteropus_vampyrus
ENSVVUG00000017311	RBFOX1	86	87.805	ENSPNAG00000023109	rbfox1	100	87.805	Pygocentrus_nattereri
ENSVVUG00000017311	RBFOX1	100	94.695	ENSRNOG00000002827	Rbfox1	100	94.695	Rattus_norvegicus
ENSVVUG00000017311	RBFOX1	100	99.202	ENSRBIG00000044478	RBFOX1	100	99.202	Rhinopithecus_bieti
ENSVVUG00000017311	RBFOX1	98	98.378	ENSRROG00000044411	RBFOX1	97	98.626	Rhinopithecus_roxellana
ENSVVUG00000017311	RBFOX1	97	98.907	ENSSBOG00000033726	RBFOX1	98	98.210	Saimiri_boliviensis_boliviensis
ENSVVUG00000017311	RBFOX1	89	93.814	ENSSHAG00000009257	RBFOX1	98	93.814	Sarcophilus_harrisii
ENSVVUG00000017311	RBFOX1	83	88.889	ENSSFOG00015023675	rbfox1	86	93.689	Scleropages_formosus
ENSVVUG00000017311	RBFOX1	84	73.654	ENSSFOG00015009955	-	89	73.654	Scleropages_formosus
ENSVVUG00000017311	RBFOX1	96	82.767	ENSSMAG00000015505	rbfox1	100	82.524	Scophthalmus_maximus
ENSVVUG00000017311	RBFOX1	89	80.328	ENSSDUG00000016413	rbfox1	100	79.189	Seriola_dumerili
ENSVVUG00000017311	RBFOX1	77	78.743	ENSSLDG00000009353	rbfox1	98	78.743	Seriola_lalandi_dorsalis
ENSVVUG00000017311	RBFOX1	71	95.219	ENSSPUG00000009732	RBFOX1	87	90.096	Sphenodon_punctatus
ENSVVUG00000017311	RBFOX1	88	81.794	ENSSPAG00000009723	rbfox1	100	81.530	Stegastes_partitus
ENSVVUG00000017311	RBFOX1	97	96.730	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSVVUG00000017311	RBFOX1	89	95.116	ENSTGUG00000004562	RBFOX1	100	95.116	Taeniopygia_guttata
ENSVVUG00000017311	RBFOX1	89	81.102	ENSTRUG00000020940	rbfox1	99	80.840	Takifugu_rubripes
ENSVVUG00000017311	RBFOX1	53	72.826	ENSTNIG00000002567	rbfox1	100	64.808	Tetraodon_nigroviridis
ENSVVUG00000017311	RBFOX1	65	99.383	ENSTBEG00000009169	-	60	99.383	Tupaia_belangeri
ENSVVUG00000017311	RBFOX1	90	96.173	ENSTTRG00000005700	RBFOX1	94	95.696	Tursiops_truncatus
ENSVVUG00000017311	RBFOX1	98	94.022	ENSUAMG00000024633	RBFOX1	97	95.300	Ursus_americanus
ENSVVUG00000017311	RBFOX1	100	87.080	ENSUMAG00000003579	RBFOX1	97	86.162	Ursus_maritimus
ENSVVUG00000017311	RBFOX1	70	96.429	ENSVPAG00000001284	RBFOX1	74	96.429	Vicugna_pacos