EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000017473 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 39210 bases
Position: chrNBDQ01000096.1:198197-237406
Accession: 112930652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000023825	ResIII	PF04851.15	1e-10	1	1
ENSVVUP00000023820	ResIII	PF04851.15	1e-10	1	1
ENSVVUP00000023825	DEAD	PF00270.29	5.9e-06	1	1
ENSVVUP00000023820	DEAD	PF00270.29	6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000031523	SMARCA5-201	3468	-	ENSVVUP00000023820	1052 (aa)	XP_025868779	UPI000DF6FE66
ENSVVUT00000031531	SMARCA5-202	3523	-	ENSVVUP00000023825	1045 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000017473's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000017473's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000017473	SMARCA5	54	42.683	ENSVVUG00000007316	CHD1L	59	42.483
ENSVVUG00000017473	SMARCA5	93	85.831	ENSVVUG00000008878	SMARCA1	98	87.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000017473	SMARCA5	100	98.764	ENSG00000153147	SMARCA5	100	98.764	Homo_sapiens
ENSVVUG00000017473	SMARCA5	100	99.715	ENSAMEG00000009585	SMARCA5	100	99.715	Ailuropoda_melanoleuca
ENSVVUG00000017473	SMARCA5	92	97.020	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSVVUG00000017473	SMARCA5	98	93.822	ENSACAG00000003038	SMARCA5	99	93.822	Anolis_carolinensis
ENSVVUG00000017473	SMARCA5	100	98.764	ENSANAG00000019345	SMARCA5	100	98.764	Aotus_nancymaae
ENSVVUG00000017473	SMARCA5	100	98.859	ENSBTAG00000003399	SMARCA5	100	98.859	Bos_taurus
ENSVVUG00000017473	SMARCA5	100	98.859	ENSCJAG00000002735	SMARCA5	100	98.859	Callithrix_jacchus
ENSVVUG00000017473	SMARCA5	100	99.810	ENSCAFG00000007525	SMARCA5	100	99.810	Canis_familiaris
ENSVVUG00000017473	SMARCA5	99	99.712	ENSCAFG00020025641	SMARCA5	100	99.712	Canis_lupus_dingo
ENSVVUG00000017473	SMARCA5	100	97.529	ENSCHIG00000016375	-	100	97.529	Capra_hircus
ENSVVUG00000017473	SMARCA5	100	99.240	ENSCHIG00000013730	-	100	99.240	Capra_hircus
ENSVVUG00000017473	SMARCA5	99	96.528	ENSTSYG00000009954	SMARCA5	99	99.799	Carlito_syrichta
ENSVVUG00000017473	SMARCA5	92	99.174	ENSCAPG00000013747	SMARCA5	95	99.174	Cavia_aperea
ENSVVUG00000017473	SMARCA5	100	97.909	ENSCPOG00000002259	SMARCA5	100	97.909	Cavia_porcellus
ENSVVUG00000017473	SMARCA5	100	98.859	ENSCCAG00000027215	SMARCA5	100	98.859	Cebus_capucinus
ENSVVUG00000017473	SMARCA5	100	98.859	ENSCATG00000044917	SMARCA5	100	98.859	Cercocebus_atys
ENSVVUG00000017473	SMARCA5	96	98.121	ENSCLAG00000006153	SMARCA5	100	99.496	Chinchilla_lanigera
ENSVVUG00000017473	SMARCA5	92	99.587	ENSCSAG00000003448	SMARCA5	100	99.587	Chlorocebus_sabaeus
ENSVVUG00000017473	SMARCA5	90	98.519	ENSCHOG00000011724	SMARCA5	90	98.519	Choloepus_hoffmanni
ENSVVUG00000017473	SMARCA5	96	96.188	ENSCPBG00000027535	SMARCA5	98	96.471	Chrysemys_picta_bellii
ENSVVUG00000017473	SMARCA5	100	98.669	ENSCANG00000041629	SMARCA5	100	98.669	Colobus_angolensis_palliatus
ENSVVUG00000017473	SMARCA5	99	97.909	ENSCGRG00001012719	Smarca5	99	97.909	Cricetulus_griseus_chok1gshd
ENSVVUG00000017473	SMARCA5	95	99.398	ENSCGRG00000001417	Smarca5	99	99.597	Cricetulus_griseus_crigri
ENSVVUG00000017473	SMARCA5	98	95.455	ENSDNOG00000009158	SMARCA5	97	96.173	Dasypus_novemcinctus
ENSVVUG00000017473	SMARCA5	91	90.776	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSVVUG00000017473	SMARCA5	92	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSVVUG00000017473	SMARCA5	100	99.240	ENSEASG00005001866	SMARCA5	100	99.240	Equus_asinus_asinus
ENSVVUG00000017473	SMARCA5	100	99.240	ENSECAG00000002676	SMARCA5	100	99.240	Equus_caballus
ENSVVUG00000017473	SMARCA5	94	95.267	ENSEEUG00000013176	SMARCA5	100	95.267	Erinaceus_europaeus
ENSVVUG00000017473	SMARCA5	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSVVUG00000017473	SMARCA5	100	99.715	ENSFCAG00000004544	SMARCA5	100	99.715	Felis_catus
ENSVVUG00000017473	SMARCA5	92	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSVVUG00000017473	SMARCA5	99	96.073	ENSFDAG00000021016	SMARCA5	100	99.698	Fukomys_damarensis
ENSVVUG00000017473	SMARCA5	99	84.947	ENSGMOG00000007519	SMARCA5	98	86.640	Gadus_morhua
ENSVVUG00000017473	SMARCA5	97	96.271	ENSGALG00000009913	SMARCA5	98	96.176	Gallus_gallus
ENSVVUG00000017473	SMARCA5	93	90.686	ENSGACG00000017238	SMARCA5	98	87.917	Gasterosteus_aculeatus
ENSVVUG00000017473	SMARCA5	97	97.151	ENSGAGG00000019882	SMARCA5	98	96.758	Gopherus_agassizii
ENSVVUG00000017473	SMARCA5	100	98.764	ENSGGOG00000012595	SMARCA5	100	98.764	Gorilla_gorilla
ENSVVUG00000017473	SMARCA5	100	97.719	ENSHGLG00000000816	-	99	97.719	Heterocephalus_glaber_female
ENSVVUG00000017473	SMARCA5	96	89.652	ENSHGLG00000000317	-	97	88.955	Heterocephalus_glaber_female
ENSVVUG00000017473	SMARCA5	96	97.923	ENSHGLG00100018421	-	100	99.597	Heterocephalus_glaber_male
ENSVVUG00000017473	SMARCA5	100	98.765	ENSSTOG00000010683	SMARCA5	99	98.765	Ictidomys_tridecemlineatus
ENSVVUG00000017473	SMARCA5	100	98.004	ENSJJAG00000014965	Smarca5	100	98.004	Jaculus_jaculus
ENSVVUG00000017473	SMARCA5	94	95.661	ENSLACG00000007091	SMARCA5	97	95.661	Latimeria_chalumnae
ENSVVUG00000017473	SMARCA5	94	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSVVUG00000017473	SMARCA5	100	98.764	ENSLAFG00000007795	SMARCA5	100	98.764	Loxodonta_africana
ENSVVUG00000017473	SMARCA5	100	98.859	ENSMFAG00000043649	SMARCA5	100	98.859	Macaca_fascicularis
ENSVVUG00000017473	SMARCA5	100	98.859	ENSMMUG00000000829	SMARCA5	100	98.859	Macaca_mulatta
ENSVVUG00000017473	SMARCA5	100	98.859	ENSMNEG00000031916	SMARCA5	100	98.859	Macaca_nemestrina
ENSVVUG00000017473	SMARCA5	100	98.859	ENSMLEG00000042393	SMARCA5	100	98.859	Mandrillus_leucophaeus
ENSVVUG00000017473	SMARCA5	95	97.300	ENSMGAG00000003517	SMARCA5	99	97.300	Meleagris_gallopavo
ENSVVUG00000017473	SMARCA5	94	99.698	ENSMAUG00000015902	Smarca5	98	99.698	Mesocricetus_auratus
ENSVVUG00000017473	SMARCA5	100	98.954	ENSMICG00000003971	SMARCA5	100	98.954	Microcebus_murinus
ENSVVUG00000017473	SMARCA5	99	97.624	ENSMOCG00000016986	-	99	97.624	Microtus_ochrogaster
ENSVVUG00000017473	SMARCA5	100	96.114	ENSMODG00000000391	SMARCA5	97	97.446	Monodelphis_domestica
ENSVVUG00000017473	SMARCA5	100	98.004	ENSMUSG00000031715	Smarca5	100	98.004	Mus_musculus
ENSVVUG00000017473	SMARCA5	100	98.194	MGP_PahariEiJ_G0022862	Smarca5	100	98.194	Mus_pahari
ENSVVUG00000017473	SMARCA5	100	99.144	ENSMLUG00000000468	SMARCA5	100	99.144	Myotis_lucifugus
ENSVVUG00000017473	SMARCA5	100	98.004	ENSNGAG00000000441	Smarca5	100	98.004	Nannospalax_galili
ENSVVUG00000017473	SMARCA5	100	98.859	ENSNLEG00000005383	SMARCA5	100	98.859	Nomascus_leucogenys
ENSVVUG00000017473	SMARCA5	92	91.322	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSVVUG00000017473	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSVVUG00000017473	SMARCA5	92	99.174	ENSOANG00000013921	SMARCA5	100	99.174	Ornithorhynchus_anatinus
ENSVVUG00000017473	SMARCA5	92	99.794	ENSOCUG00000013042	SMARCA5	100	99.794	Oryctolagus_cuniculus
ENSVVUG00000017473	SMARCA5	100	98.954	ENSOGAG00000009702	SMARCA5	100	98.954	Otolemur_garnettii
ENSVVUG00000017473	SMARCA5	99	99.128	ENSOARG00000010589	SMARCA5	99	99.049	Ovis_aries
ENSVVUG00000017473	SMARCA5	100	98.574	ENSPPAG00000028523	SMARCA5	100	98.574	Pan_paniscus
ENSVVUG00000017473	SMARCA5	98	94.060	ENSPPRG00000004925	SMARCA5	97	94.995	Panthera_pardus
ENSVVUG00000017473	SMARCA5	96	99.901	ENSPTIG00000020959	SMARCA5	97	99.901	Panthera_tigris_altaica
ENSVVUG00000017473	SMARCA5	100	98.669	ENSPTRG00000016472	SMARCA5	100	98.669	Pan_troglodytes
ENSVVUG00000017473	SMARCA5	100	98.859	ENSPANG00000001175	SMARCA5	100	98.859	Papio_anubis
ENSVVUG00000017473	SMARCA5	95	89.500	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSVVUG00000017473	SMARCA5	93	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSVVUG00000017473	SMARCA5	95	96.289	ENSPSIG00000004177	SMARCA5	100	96.289	Pelodiscus_sinensis
ENSVVUG00000017473	SMARCA5	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSVVUG00000017473	SMARCA5	97	97.839	ENSPEMG00000008060	Smarca5	99	97.839	Peromyscus_maniculatus_bairdii
ENSVVUG00000017473	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSVVUG00000017473	SMARCA5	96	69.724	ENSPMAG00000006011	SMARCA5	80	88.591	Petromyzon_marinus
ENSVVUG00000017473	SMARCA5	100	95.648	ENSPCIG00000003926	SMARCA5	97	97.544	Phascolarctos_cinereus
ENSVVUG00000017473	SMARCA5	100	98.764	ENSPPYG00000015091	SMARCA5	100	98.764	Pongo_abelii
ENSVVUG00000017473	SMARCA5	86	89.940	ENSPCAG00000014230	SMARCA5	88	90.630	Procavia_capensis
ENSVVUG00000017473	SMARCA5	100	96.198	ENSPCOG00000026744	SMARCA5	100	96.198	Propithecus_coquereli
ENSVVUG00000017473	SMARCA5	99	98.953	ENSPVAG00000006482	SMARCA5	100	98.953	Pteropus_vampyrus
ENSVVUG00000017473	SMARCA5	97	88.333	ENSPNAG00000027824	SMARCA5	97	90.550	Pygocentrus_nattereri
ENSVVUG00000017473	SMARCA5	95	99.497	ENSRNOG00000018149	Smarca5	100	99.497	Rattus_norvegicus
ENSVVUG00000017473	SMARCA5	100	98.670	ENSRBIG00000044644	SMARCA5	100	98.670	Rhinopithecus_bieti
ENSVVUG00000017473	SMARCA5	99	98.460	ENSRROG00000029591	SMARCA5	99	99.497	Rhinopithecus_roxellana
ENSVVUG00000017473	SMARCA5	100	98.574	ENSSBOG00000036257	SMARCA5	100	98.574	Saimiri_boliviensis_boliviensis
ENSVVUG00000017473	SMARCA5	94	99.194	ENSSHAG00000008464	SMARCA5	100	99.194	Sarcophilus_harrisii
ENSVVUG00000017473	SMARCA5	95	89.930	ENSSFOG00015013252	SMARCA5	97	89.930	Scleropages_formosus
ENSVVUG00000017473	SMARCA5	97	94.990	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSVVUG00000017473	SMARCA5	100	98.669	ENSSSCG00000009047	SMARCA5	100	98.669	Sus_scrofa
ENSVVUG00000017473	SMARCA5	96	96.230	ENSTGUG00000002408	SMARCA5	100	96.230	Taeniopygia_guttata
ENSVVUG00000017473	SMARCA5	99	99.424	ENSUAMG00000023495	SMARCA5	99	99.612	Ursus_americanus
ENSVVUG00000017473	SMARCA5	95	100.000	ENSUMAG00000015324	SMARCA5	97	100.000	Ursus_maritimus
ENSVVUG00000017473	SMARCA5	100	98.764	ENSVPAG00000008982	SMARCA5	100	98.764	Vicugna_pacos
ENSVVUG00000017473	SMARCA5	94	89.458	ENSXETG00000017566	smarca5	95	93.242	Xenopus_tropicalis