EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000017612 (Gene tree)
Gene ID: -
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 139552 bases
Position: chrNBDQ01000138.1:5064133-5203684
Accession: 112934204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000024004	Gar1	PF04410.14	1.1e-38	1	1
ENSVVUP00000024007	Gar1	PF04410.14	1.4e-38	1	1
ENSVVUP00000024012	Gar1	PF04410.14	1.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000031739	GAR1-201	1343	-	ENSVVUP00000024004	194 (aa)	-	-
ENSVVUT00000031748	GAR1-202	645	-	ENSVVUP00000024007	210 (aa)	XP_025873368	UPI00004BF442
ENSVVUT00000031753	GAR1-203	672	-	ENSVVUP00000024012	219 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000017612's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000017612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000017612	GAR1	56	99.083	ENSG00000109534	GAR1	50	99.083	Homo_sapiens
ENSVVUG00000017612	GAR1	55	94.393	ENSAPOG00000019754	gar1	50	94.393	Acanthochromis_polyacanthus
ENSVVUG00000017612	GAR1	96	97.861	ENSAMEG00000004605	GAR1	91	97.861	Ailuropoda_melanoleuca
ENSVVUG00000017612	GAR1	55	94.393	ENSAOCG00000020947	gar1	50	94.393	Amphiprion_ocellaris
ENSVVUG00000017612	GAR1	55	94.393	ENSAPEG00000001676	gar1	50	94.393	Amphiprion_percula
ENSVVUG00000017612	GAR1	55	94.393	ENSATEG00000003733	gar1	50	94.393	Anabas_testudineus
ENSVVUG00000017612	GAR1	55	89.623	ENSAPLG00000010926	GAR1	60	88.889	Anas_platyrhynchos
ENSVVUG00000017612	GAR1	55	91.509	ENSACAG00000010031	GAR1	51	90.741	Anolis_carolinensis
ENSVVUG00000017612	GAR1	100	92.727	ENSANAG00000021608	GAR1	100	92.727	Aotus_nancymaae
ENSVVUG00000017612	GAR1	67	88.356	ENSACLG00000010029	gar1	64	89.510	Astatotilapia_calliptera
ENSVVUG00000017612	GAR1	100	95.305	ENSBTAG00000000748	GAR1	90	96.296	Bos_taurus
ENSVVUG00000017612	GAR1	100	92.727	ENSCJAG00000004041	GAR1	100	92.727	Callithrix_jacchus
ENSVVUG00000017612	GAR1	76	93.878	ENSCAFG00000011503	GAR1	60	93.878	Canis_familiaris
ENSVVUG00000017612	GAR1	95	100.000	ENSCAFG00020015566	GAR1	96	100.000	Canis_lupus_dingo
ENSVVUG00000017612	GAR1	99	95.714	ENSCHIG00000016026	-	88	96.825	Capra_hircus
ENSVVUG00000017612	GAR1	66	88.372	ENSCHIG00000011049	-	55	86.239	Capra_hircus
ENSVVUG00000017612	GAR1	56	99.083	ENSTSYG00000013668	-	51	99.083	Carlito_syrichta
ENSVVUG00000017612	GAR1	74	76.923	ENSTSYG00000026632	-	56	90.826	Carlito_syrichta
ENSVVUG00000017612	GAR1	57	99.091	ENSCPOG00000004216	GAR1	50	99.083	Cavia_porcellus
ENSVVUG00000017612	GAR1	100	92.727	ENSCCAG00000029372	GAR1	100	92.727	Cebus_capucinus
ENSVVUG00000017612	GAR1	57	99.091	ENSCATG00000021854	GAR1	55	99.083	Cercocebus_atys
ENSVVUG00000017612	GAR1	62	97.521	ENSCLAG00000005335	GAR1	69	98.182	Chinchilla_lanigera
ENSVVUG00000017612	GAR1	55	99.065	ENSCSAG00000003922	GAR1	55	99.083	Chlorocebus_sabaeus
ENSVVUG00000017612	GAR1	58	98.246	ENSCHOG00000007484	-	51	98.276	Choloepus_hoffmanni
ENSVVUG00000017612	GAR1	64	87.903	ENSCPBG00000004310	GAR1	69	78.102	Chrysemys_picta_bellii
ENSVVUG00000017612	GAR1	57	98.182	ENSCANG00000039262	GAR1	50	98.165	Colobus_angolensis_palliatus
ENSVVUG00000017612	GAR1	55	93.458	ENSCVAG00000002103	gar1	64	87.970	Cyprinodon_variegatus
ENSVVUG00000017612	GAR1	55	91.589	ENSDARG00000076526	gar1	50	90.265	Danio_rerio
ENSVVUG00000017612	GAR1	56	98.165	ENSDNOG00000037632	GAR1	55	98.165	Dasypus_novemcinctus
ENSVVUG00000017612	GAR1	57	97.297	ENSDORG00000000482	Gar1	50	97.248	Dipodomys_ordii
ENSVVUG00000017612	GAR1	54	59.615	FBgn0011824	CG4038	72	54.472	Drosophila_melanogaster
ENSVVUG00000017612	GAR1	57	99.091	ENSEASG00005004658	GAR1	50	99.083	Equus_asinus_asinus
ENSVVUG00000017612	GAR1	96	96.859	ENSECAG00000013624	GAR1	97	95.312	Equus_caballus
ENSVVUG00000017612	GAR1	100	98.578	ENSFCAG00000040791	-	100	98.578	Felis_catus
ENSVVUG00000017612	GAR1	75	57.241	ENSFCAG00000025841	-	57	64.706	Felis_catus
ENSVVUG00000017612	GAR1	55	92.453	ENSFALG00000006445	GAR1	66	80.556	Ficedula_albicollis
ENSVVUG00000017612	GAR1	57	90.991	ENSFHEG00000008068	gar1	53	91.228	Fundulus_heteroclitus
ENSVVUG00000017612	GAR1	65	79.577	ENSGMOG00000012419	gar1	67	76.159	Gadus_morhua
ENSVVUG00000017612	GAR1	55	93.458	ENSGAFG00000016833	gar1	61	83.217	Gambusia_affinis
ENSVVUG00000017612	GAR1	64	82.258	ENSGAGG00000004393	GAR1	62	89.256	Gopherus_agassizii
ENSVVUG00000017612	GAR1	56	98.165	ENSGGOG00000008681	GAR1	50	98.165	Gorilla_gorilla
ENSVVUG00000017612	GAR1	57	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSVVUG00000017612	GAR1	55	99.065	ENSHGLG00000000493	GAR1	96	98.630	Heterocephalus_glaber_female
ENSVVUG00000017612	GAR1	57	90.000	ENSIPUG00000003194	gar1	51	91.589	Ictalurus_punctatus
ENSVVUG00000017612	GAR1	56	96.330	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSVVUG00000017612	GAR1	57	90.090	ENSKMAG00000010402	gar1	71	82.667	Kryptolebias_marmoratus
ENSVVUG00000017612	GAR1	64	84.298	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSVVUG00000017612	GAR1	55	93.458	ENSLOCG00000011711	GAR1	71	86.429	Lepisosteus_oculatus
ENSVVUG00000017612	GAR1	56	83.333	ENSMFAG00000003572	-	53	82.569	Macaca_fascicularis
ENSVVUG00000017612	GAR1	57	99.091	ENSMFAG00000024592	GAR1	50	99.083	Macaca_fascicularis
ENSVVUG00000017612	GAR1	57	99.091	ENSMMUG00000021225	GAR1	50	99.083	Macaca_mulatta
ENSVVUG00000017612	GAR1	57	99.091	ENSMNEG00000042594	GAR1	50	99.083	Macaca_nemestrina
ENSVVUG00000017612	GAR1	57	99.091	ENSMLEG00000002496	GAR1	50	99.083	Mandrillus_leucophaeus
ENSVVUG00000017612	GAR1	67	88.356	ENSMZEG00005001281	gar1	64	89.510	Maylandia_zebra
ENSVVUG00000017612	GAR1	56	95.413	ENSMAUG00000016788	Gar1	90	80.702	Mesocricetus_auratus
ENSVVUG00000017612	GAR1	73	94.326	ENSMICG00000003326	GAR1	50	98.165	Microcebus_murinus
ENSVVUG00000017612	GAR1	56	96.330	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSVVUG00000017612	GAR1	55	96.262	ENSMMOG00000004156	gar1	52	96.262	Mola_mola
ENSVVUG00000017612	GAR1	55	92.523	ENSMALG00000009672	gar1	50	92.523	Monopterus_albus
ENSVVUG00000017612	GAR1	56	95.413	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSVVUG00000017612	GAR1	57	95.455	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSVVUG00000017612	GAR1	57	97.273	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSVVUG00000017612	GAR1	57	95.455	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSVVUG00000017612	GAR1	100	98.104	ENSMPUG00000008615	GAR1	100	98.104	Mustela_putorius_furo
ENSVVUG00000017612	GAR1	100	92.411	ENSMLUG00000003776	GAR1	100	92.411	Myotis_lucifugus
ENSVVUG00000017612	GAR1	57	97.273	ENSNGAG00000008268	Gar1	99	96.053	Nannospalax_galili
ENSVVUG00000017612	GAR1	57	82.883	ENSNLEG00000034282	-	55	82.569	Nomascus_leucogenys
ENSVVUG00000017612	GAR1	57	99.091	ENSNLEG00000016578	GAR1	50	99.083	Nomascus_leucogenys
ENSVVUG00000017612	GAR1	56	85.321	ENSOPRG00000012089	GAR1	57	91.525	Ochotona_princeps
ENSVVUG00000017612	GAR1	55	98.131	ENSODEG00000011083	GAR1	63	97.561	Octodon_degus
ENSVVUG00000017612	GAR1	56	98.165	ENSOCUG00000003901	GAR1	51	98.165	Oryctolagus_cuniculus
ENSVVUG00000017612	GAR1	56	98.165	ENSOGAG00000004693	GAR1	51	98.165	Otolemur_garnettii
ENSVVUG00000017612	GAR1	100	95.775	ENSOARG00000004910	GAR1	100	95.775	Ovis_aries
ENSVVUG00000017612	GAR1	56	99.083	ENSPPAG00000014081	GAR1	55	99.083	Pan_paniscus
ENSVVUG00000017612	GAR1	100	98.104	ENSPPRG00000023697	GAR1	100	98.104	Panthera_pardus
ENSVVUG00000017612	GAR1	100	98.104	ENSPTIG00000021565	GAR1	100	98.104	Panthera_tigris_altaica
ENSVVUG00000017612	GAR1	57	99.091	ENSPTRG00000016364	GAR1	55	99.083	Pan_troglodytes
ENSVVUG00000017612	GAR1	93	79.861	ENSPTRG00000049340	-	60	75.397	Pan_troglodytes
ENSVVUG00000017612	GAR1	57	99.091	ENSPANG00000000639	GAR1	50	99.083	Papio_anubis
ENSVVUG00000017612	GAR1	55	92.453	ENSPSIG00000002970	GAR1	50	90.826	Pelodiscus_sinensis
ENSVVUG00000017612	GAR1	53	91.176	ENSPMGG00000022004	gar1	76	84.058	Periophthalmus_magnuspinnatus
ENSVVUG00000017612	GAR1	56	95.413	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSVVUG00000017612	GAR1	55	92.523	ENSPFOG00000024155	gar1	51	92.523	Poecilia_formosa
ENSVVUG00000017612	GAR1	55	92.523	ENSPLAG00000015056	gar1	51	92.523	Poecilia_latipinna
ENSVVUG00000017612	GAR1	55	93.458	ENSPMEG00000009320	gar1	51	93.458	Poecilia_mexicana
ENSVVUG00000017612	GAR1	55	92.523	ENSPREG00000010377	gar1	69	77.778	Poecilia_reticulata
ENSVVUG00000017612	GAR1	56	99.083	ENSPPYG00000014996	GAR1	50	99.083	Pongo_abelii
ENSVVUG00000017612	GAR1	55	99.065	ENSPCOG00000027049	GAR1	56	99.083	Propithecus_coquereli
ENSVVUG00000017612	GAR1	94	96.739	ENSPVAG00000005992	GAR1	77	96.739	Pteropus_vampyrus
ENSVVUG00000017612	GAR1	57	91.818	ENSPNYG00000020926	gar1	55	84.848	Pundamilia_nyererei
ENSVVUG00000017612	GAR1	57	96.364	ENSRNOG00000061146	Gar1	63	97.196	Rattus_norvegicus
ENSVVUG00000017612	GAR1	55	99.065	ENSRBIG00000019547	GAR1	55	99.083	Rhinopithecus_bieti
ENSVVUG00000017612	GAR1	58	81.250	ENSRBIG00000042411	-	53	80.734	Rhinopithecus_bieti
ENSVVUG00000017612	GAR1	57	99.091	ENSRROG00000028454	GAR1	55	99.083	Rhinopithecus_roxellana
ENSVVUG00000017612	GAR1	58	81.250	ENSRROG00000044348	-	52	80.734	Rhinopithecus_roxellana
ENSVVUG00000017612	GAR1	62	52.846	YHR089C	-	84	48.649	Saccharomyces_cerevisiae
ENSVVUG00000017612	GAR1	56	99.083	ENSSBOG00000024785	GAR1	50	99.083	Saimiri_boliviensis_boliviensis
ENSVVUG00000017612	GAR1	55	93.396	ENSSHAG00000002161	GAR1	60	86.429	Sarcophilus_harrisii
ENSVVUG00000017612	GAR1	55	91.589	ENSSMAG00000009976	gar1	52	90.265	Scophthalmus_maximus
ENSVVUG00000017612	GAR1	55	93.458	ENSSDUG00000002130	gar1	64	80.519	Seriola_dumerili
ENSVVUG00000017612	GAR1	55	93.458	ENSSLDG00000023264	gar1	50	93.458	Seriola_lalandi_dorsalis
ENSVVUG00000017612	GAR1	55	93.396	ENSSPUG00000008707	GAR1	61	91.743	Sphenodon_punctatus
ENSVVUG00000017612	GAR1	99	96.190	ENSSSCG00000009137	GAR1	100	96.209	Sus_scrofa
ENSVVUG00000017612	GAR1	51	89.899	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSVVUG00000017612	GAR1	55	90.654	ENSTRUG00000020580	gar1	51	90.654	Takifugu_rubripes
ENSVVUG00000017612	GAR1	54	93.269	ENSTNIG00000013023	gar1	61	93.458	Tetraodon_nigroviridis
ENSVVUG00000017612	GAR1	98	96.842	ENSUAMG00000005652	GAR1	96	98.913	Ursus_americanus
ENSVVUG00000017612	GAR1	100	96.682	ENSUMAG00000000776	GAR1	100	96.682	Ursus_maritimus
ENSVVUG00000017612	GAR1	100	96.698	ENSVPAG00000009844	GAR1	88	96.698	Vicugna_pacos
ENSVVUG00000017612	GAR1	55	93.458	ENSXCOG00000014843	GAR1	72	78.235	Xiphophorus_couchianus
ENSVVUG00000017612	GAR1	55	93.458	ENSXMAG00000002316	GAR1	60	84.507	Xiphophorus_maculatus