EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSVVUG00000017820 (Gene tree)
Gene ID
-
Gene Symbol
SMARCA4
Alias
BAF190|BRG1|FLJ39786|SNF2|SNF2-BETA|SNF2L4|SNF2LB|SWI2|hSNF2b
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Vulpes_vulpes
Status
putative
Strand
Plus strand
Length
84563 bases
Position
chrNBDQ01000183.1:470817-555379
Accession
112908164
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSVVUP00000024329ResIIIPF04851.152.5e-0911
ENSVVUP00000024338ResIIIPF04851.152.6e-0911
ENSVVUP00000024329BRKPF07533.162e-1711
ENSVVUP00000024338BRKPF07533.162e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSVVUT00000032158SMARCA4-2014995XM_025983580ENSVVUP000000243291664 (aa)XP_025839365-
ENSVVUT00000032167SMARCA4-2025070-ENSVVUP000000243381689 (aa)--
Gene Model
Click here to download ENSVVUG00000017820's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000017820's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSVVUG00000017820SMARCA47182.598ENSVVUG00000004598SMARCA29782.170
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSVVUG00000017820SMARCA49799.752ENSG00000127616SMARCA410099.752Homo_sapiens
ENSVVUG00000017820SMARCA47387.694ENSAPOG00000003509smarca4a9886.069Acanthochromis_polyacanthus
ENSVVUG00000017820SMARCA49284.102ENSAPOG00000004542SMARCA49983.623Acanthochromis_polyacanthus
ENSVVUG00000017820SMARCA49795.471ENSAMEG00000010868SMARCA410095.471Ailuropoda_melanoleuca
ENSVVUG00000017820SMARCA49487.617ENSACIG00000021550smarca4a9886.065Amphilophus_citrinellus
ENSVVUG00000017820SMARCA48785.823ENSAOCG00000019167smarca4a10085.302Amphiprion_ocellaris
ENSVVUG00000017820SMARCA49186.965ENSAOCG00000009450-9787.525Amphiprion_ocellaris
ENSVVUG00000017820SMARCA48785.892ENSAPEG00000015559smarca4a10085.371Amphiprion_percula
ENSVVUG00000017820SMARCA49783.245ENSAPEG00000023108-9983.195Amphiprion_percula
ENSVVUG00000017820SMARCA49683.748ENSATEG00000001094-9589.985Anabas_testudineus
ENSVVUG00000017820SMARCA49787.203ENSATEG00000011524smarca4a10087.333Anabas_testudineus
ENSVVUG00000017820SMARCA49799.503ENSANAG00000036991SMARCA410096.363Aotus_nancymaae
ENSVVUG00000017820SMARCA49488.649ENSACLG00000000163smarca4a9887.992Astatotilapia_calliptera
ENSVVUG00000017820SMARCA49284.168ENSACLG00000008638-9883.281Astatotilapia_calliptera
ENSVVUG00000017820SMARCA49187.378ENSAMXG00000011238-9887.174Astyanax_mexicanus
ENSVVUG00000017820SMARCA49798.885ENSBTAG00000019220SMARCA410098.885Bos_taurus
ENSVVUG00000017820SMARCA49795.890ENSCJAG00000005936SMARCA410095.890Callithrix_jacchus
ENSVVUG00000017820SMARCA497100.000ENSCAFG00000017584SMARCA4100100.000Canis_familiaris
ENSVVUG00000017820SMARCA49899.877ENSCAFG00020024620SMARCA49999.877Canis_lupus_dingo
ENSVVUG00000017820SMARCA49794.434ENSCHIG00000015318SMARCA410094.434Capra_hircus
ENSVVUG00000017820SMARCA49898.775ENSTSYG00000012966SMARCA410098.950Carlito_syrichta
ENSVVUG00000017820SMARCA49188.962ENSCAPG00000015932SMARCA49695.145Cavia_aperea
ENSVVUG00000017820SMARCA49798.947ENSCPOG00000015549SMARCA410098.947Cavia_porcellus
ENSVVUG00000017820SMARCA49895.836ENSCCAG00000031660SMARCA49995.836Cebus_capucinus
ENSVVUG00000017820SMARCA49899.692ENSCATG00000029530SMARCA410099.752Cercocebus_atys
ENSVVUG00000017820SMARCA49798.699ENSCLAG00000011946SMARCA410098.699Chinchilla_lanigera
ENSVVUG00000017820SMARCA49797.155ENSCPBG00000009994SMARCA410097.155Chrysemys_picta_bellii
ENSVVUG00000017820SMARCA49899.754ENSCANG00000036013SMARCA410099.752Colobus_angolensis_palliatus
ENSVVUG00000017820SMARCA49799.195ENSCGRG00001016732Smarca410099.195Cricetulus_griseus_chok1gshd
ENSVVUG00000017820SMARCA49799.195ENSCGRG00000017242Smarca410099.195Cricetulus_griseus_crigri
ENSVVUG00000017820SMARCA49486.860ENSCSEG00000014771smarca4a9985.385Cynoglossus_semilaevis
ENSVVUG00000017820SMARCA49684.408ENSCVAG00000003018-9687.739Cyprinodon_variegatus
ENSVVUG00000017820SMARCA49486.951ENSCVAG00000006979smarca4a9986.712Cyprinodon_variegatus
ENSVVUG00000017820SMARCA49787.044ENSDARG00000077226smarca4a10086.199Danio_rerio
ENSVVUG00000017820SMARCA48984.207ENSDARG00000104339SMARCA49584.661Danio_rerio
ENSVVUG00000017820SMARCA49789.884ENSDNOG00000048847SMARCA49994.655Dasypus_novemcinctus
ENSVVUG00000017820SMARCA48391.655ENSDORG00000002544Smarca492100.000Dipodomys_ordii
ENSVVUG00000017820SMARCA49187.063ENSETEG00000013361SMARCA49486.417Echinops_telfairi
ENSVVUG00000017820SMARCA49899.323ENSEASG00005006167SMARCA49999.323Equus_asinus_asinus
ENSVVUG00000017820SMARCA49799.442ENSECAG00000008334SMARCA410099.442Equus_caballus
ENSVVUG00000017820SMARCA49786.457ENSELUG00000010247smarca4a9886.196Esox_lucius
ENSVVUG00000017820SMARCA49677.409ENSELUG00000023232-9385.988Esox_lucius
ENSVVUG00000017820SMARCA49799.567ENSFCAG00000004894SMARCA410099.567Felis_catus
ENSVVUG00000017820SMARCA47297.733ENSFALG00000004208SMARCA49391.917Ficedula_albicollis
ENSVVUG00000017820SMARCA48998.851ENSFDAG00000012237SMARCA49798.851Fukomys_damarensis
ENSVVUG00000017820SMARCA49784.386ENSFHEG00000007902-9884.884Fundulus_heteroclitus
ENSVVUG00000017820SMARCA49486.424ENSFHEG00000010182smarca4a10086.642Fundulus_heteroclitus
ENSVVUG00000017820SMARCA49081.040ENSGMOG00000002649smarca4a8781.882Gadus_morhua
ENSVVUG00000017820SMARCA49080.687ENSGMOG00000005756-8779.381Gadus_morhua
ENSVVUG00000017820SMARCA47197.039ENSGALG00000047145SMARCA410097.039Gallus_gallus
ENSVVUG00000017820SMARCA48788.835ENSGAFG00000014900smarca4a9988.459Gambusia_affinis
ENSVVUG00000017820SMARCA49681.989ENSGAFG00000008827-9882.091Gambusia_affinis
ENSVVUG00000017820SMARCA49585.857ENSGACG00000006691smarca4a10084.625Gasterosteus_aculeatus
ENSVVUG00000017820SMARCA49680.591ENSGACG00000016033-9978.323Gasterosteus_aculeatus
ENSVVUG00000017820SMARCA49797.274ENSGAGG00000016757SMARCA410097.274Gopherus_agassizii
ENSVVUG00000017820SMARCA49799.752ENSGGOG00000009882SMARCA410099.752Gorilla_gorilla
ENSVVUG00000017820SMARCA49787.629ENSHBUG00000021172smarca4a10087.508Haplochromis_burtoni
ENSVVUG00000017820SMARCA49784.072ENSHBUG00000005447-9983.264Haplochromis_burtoni
ENSVVUG00000017820SMARCA49798.766ENSHGLG00000010519SMARCA410098.766Heterocephalus_glaber_female
ENSVVUG00000017820SMARCA49797.713ENSHGLG00100013774SMARCA410097.713Heterocephalus_glaber_male
ENSVVUG00000017820SMARCA49584.423ENSHCOG00000009510smarca4a9786.773Hippocampus_comes
ENSVVUG00000017820SMARCA49584.755ENSIPUG00000016346-9883.960Ictalurus_punctatus
ENSVVUG00000017820SMARCA49788.010ENSIPUG00000006107smarca4a10087.949Ictalurus_punctatus
ENSVVUG00000017820SMARCA49799.566ENSSTOG00000007939SMARCA410099.566Ictidomys_tridecemlineatus
ENSVVUG00000017820SMARCA49797.450ENSJJAG00000012877Smarca410097.450Jaculus_jaculus
ENSVVUG00000017820SMARCA49783.998ENSKMAG00000019518-9887.541Kryptolebias_marmoratus
ENSVVUG00000017820SMARCA49786.247ENSKMAG00000011931smarca4a10086.369Kryptolebias_marmoratus
ENSVVUG00000017820SMARCA48788.522ENSLBEG00000020655-9476.794Labrus_bergylta
ENSVVUG00000017820SMARCA49285.909ENSLBEG00000017383smarca4a7789.017Labrus_bergylta
ENSVVUG00000017820SMARCA45088.902ENSLACG00000015309SMARCA410088.397Latimeria_chalumnae
ENSVVUG00000017820SMARCA49787.963ENSLOCG00000007820smarca4a8792.508Lepisosteus_oculatus
ENSVVUG00000017820SMARCA49799.505ENSLAFG00000001433SMARCA410099.505Loxodonta_africana
ENSVVUG00000017820SMARCA49899.754ENSMFAG00000032146SMARCA49999.754Macaca_fascicularis
ENSVVUG00000017820SMARCA49799.752ENSMMUG00000012042SMARCA410099.752Macaca_mulatta
ENSVVUG00000017820SMARCA49899.507ENSMNEG00000028512SMARCA410099.504Macaca_nemestrina
ENSVVUG00000017820SMARCA49899.631ENSMLEG00000034976SMARCA410099.505Mandrillus_leucophaeus
ENSVVUG00000017820SMARCA49787.279ENSMAMG00000009256smarca4a10086.251Mastacembelus_armatus
ENSVVUG00000017820SMARCA49286.971ENSMAMG00000002841-9887.126Mastacembelus_armatus
ENSVVUG00000017820SMARCA49186.316ENSMZEG00005023861-9883.982Maylandia_zebra
ENSVVUG00000017820SMARCA49787.637ENSMZEG00005003889smarca4a10087.272Maylandia_zebra
ENSVVUG00000017820SMARCA49798.949ENSMAUG00000020731Smarca410098.949Mesocricetus_auratus
ENSVVUG00000017820SMARCA49799.443ENSMICG00000009806SMARCA410099.443Microcebus_murinus
ENSVVUG00000017820SMARCA49798.949ENSMOCG00000022209Smarca410098.949Microtus_ochrogaster
ENSVVUG00000017820SMARCA49285.449ENSMMOG00000007571smarca4a9884.522Mola_mola
ENSVVUG00000017820SMARCA49796.841ENSMODG00000006287SMARCA410096.841Monodelphis_domestica
ENSVVUG00000017820SMARCA49487.105ENSMALG00000003388smarca4a10086.951Monopterus_albus
ENSVVUG00000017820SMARCA48783.737ENSMALG00000021534-8390.720Monopterus_albus
ENSVVUG00000017820SMARCA49799.257MGP_CAROLIEiJ_G0031879Smarca410099.257Mus_caroli
ENSVVUG00000017820SMARCA49799.257ENSMUSG00000032187Smarca410099.257Mus_musculus
ENSVVUG00000017820SMARCA49798.761MGP_PahariEiJ_G0014745Smarca410098.761Mus_pahari
ENSVVUG00000017820SMARCA49799.257MGP_SPRETEiJ_G0033003Smarca410099.257Mus_spretus
ENSVVUG00000017820SMARCA49799.876ENSMPUG00000005711SMARCA410099.876Mustela_putorius_furo
ENSVVUG00000017820SMARCA49799.504ENSMLUG00000004491-10099.504Myotis_lucifugus
ENSVVUG00000017820SMARCA49798.699ENSNGAG00000021852Smarca410098.699Nannospalax_galili
ENSVVUG00000017820SMARCA49386.132ENSNBRG00000011457smarca4a9686.234Neolamprologus_brichardi
ENSVVUG00000017820SMARCA49893.600ENSNLEG00000012389SMARCA49993.600Nomascus_leucogenys
ENSVVUG00000017820SMARCA47893.103ENSOPRG00000000885-7893.281Ochotona_princeps
ENSVVUG00000017820SMARCA49795.882ENSODEG00000017127SMARCA410095.882Octodon_degus
ENSVVUG00000017820SMARCA49784.132ENSONIG00000018040-10083.323Oreochromis_niloticus
ENSVVUG00000017820SMARCA49788.326ENSONIG00000008196smarca4a10088.279Oreochromis_niloticus
ENSVVUG00000017820SMARCA49691.283ENSOCUG00000001787SMARCA49991.283Oryctolagus_cuniculus
ENSVVUG00000017820SMARCA49486.211ENSORLG00000015452smarca4a10085.732Oryzias_latipes
ENSVVUG00000017820SMARCA49283.543ENSORLG00000003955-9887.252Oryzias_latipes
ENSVVUG00000017820SMARCA49283.563ENSORLG00020009728-9787.803Oryzias_latipes_hni
ENSVVUG00000017820SMARCA49785.784ENSORLG00020004611smarca4a10085.714Oryzias_latipes_hni
ENSVVUG00000017820SMARCA49683.243ENSORLG00015007739-9982.546Oryzias_latipes_hsok
ENSVVUG00000017820SMARCA49785.906ENSORLG00015016560smarca4a10085.854Oryzias_latipes_hsok
ENSVVUG00000017820SMARCA49786.561ENSOMEG00000007486smarca4a10086.882Oryzias_melastigma
ENSVVUG00000017820SMARCA49383.509ENSOMEG00000016626-9983.612Oryzias_melastigma
ENSVVUG00000017820SMARCA48797.576ENSOGAG00000016148SMARCA410097.576Otolemur_garnettii
ENSVVUG00000017820SMARCA49797.895ENSOARG00000017454SMARCA410097.895Ovis_aries
ENSVVUG00000017820SMARCA49899.202ENSPPAG00000043191SMARCA410099.752Pan_paniscus
ENSVVUG00000017820SMARCA49799.567ENSPPRG00000000064SMARCA410099.567Panthera_pardus
ENSVVUG00000017820SMARCA49899.202ENSPTRG00000010488SMARCA410099.752Pan_troglodytes
ENSVVUG00000017820SMARCA49899.507ENSPANG00000011042SMARCA49999.507Papio_anubis
ENSVVUG00000017820SMARCA49586.529ENSPKIG00000010087-9887.147Paramormyrops_kingsleyae
ENSVVUG00000017820SMARCA49788.085ENSPKIG00000007770SMARCA410086.691Paramormyrops_kingsleyae
ENSVVUG00000017820SMARCA49790.904ENSPSIG00000005547SMARCA410089.994Pelodiscus_sinensis
ENSVVUG00000017820SMARCA49799.072ENSPEMG00000020389Smarca410099.072Peromyscus_maniculatus_bairdii
ENSVVUG00000017820SMARCA49798.761ENSPCIG00000017138SMARCA410098.761Phascolarctos_cinereus
ENSVVUG00000017820SMARCA49783.463ENSPFOG00000007892smarca4a10086.679Poecilia_formosa
ENSVVUG00000017820SMARCA49783.821ENSPFOG00000012930-9983.681Poecilia_formosa
ENSVVUG00000017820SMARCA49783.364ENSPLAG00000014294smarca4a10086.740Poecilia_latipinna
ENSVVUG00000017820SMARCA48090.150ENSPLAG00000018616-8190.527Poecilia_latipinna
ENSVVUG00000017820SMARCA49684.721ENSPMEG00000008929-9884.847Poecilia_mexicana
ENSVVUG00000017820SMARCA49186.317ENSPMEG00000003725smarca4a9787.452Poecilia_mexicana
ENSVVUG00000017820SMARCA49187.183ENSPREG00000014823-9784.408Poecilia_reticulata
ENSVVUG00000017820SMARCA49485.442ENSPREG00000014608smarca4a10086.372Poecilia_reticulata
ENSVVUG00000017820SMARCA49797.693ENSPPYG00000009568SMARCA410097.693Pongo_abelii
ENSVVUG00000017820SMARCA47798.675ENSPCAG00000014054SMARCA47798.675Procavia_capensis
ENSVVUG00000017820SMARCA49899.446ENSPCOG00000023011SMARCA410099.320Propithecus_coquereli
ENSVVUG00000017820SMARCA49399.058ENSPVAG00000007787SMARCA49699.058Pteropus_vampyrus
ENSVVUG00000017820SMARCA49387.626ENSPNYG00000000717smarca4a9787.908Pundamilia_nyererei
ENSVVUG00000017820SMARCA49286.778ENSPNAG00000006636-9786.402Pygocentrus_nattereri
ENSVVUG00000017820SMARCA49799.195ENSRNOG00000009271Smarca410099.195Rattus_norvegicus
ENSVVUG00000017820SMARCA49899.569ENSRBIG00000038696SMARCA49999.569Rhinopithecus_bieti
ENSVVUG00000017820SMARCA49899.631ENSRROG00000045509SMARCA410099.628Rhinopithecus_roxellana
ENSVVUG00000017820SMARCA49898.895ENSSBOG00000026896SMARCA49999.627Saimiri_boliviensis_boliviensis
ENSVVUG00000017820SMARCA49798.575ENSSHAG00000001642SMARCA410098.575Sarcophilus_harrisii
ENSVVUG00000017820SMARCA48890.359ENSSFOG00015009921-9190.868Scleropages_formosus
ENSVVUG00000017820SMARCA49788.518ENSSFOG00015013823smarca410086.103Scleropages_formosus
ENSVVUG00000017820SMARCA49780.950ENSSMAG00000014082-9981.280Scophthalmus_maximus
ENSVVUG00000017820SMARCA49785.749ENSSMAG00000003200smarca4a10084.615Scophthalmus_maximus
ENSVVUG00000017820SMARCA49783.661ENSSDUG00000017298smarca4a10083.752Seriola_dumerili
ENSVVUG00000017820SMARCA49686.173ENSSDUG00000005388-9984.433Seriola_dumerili
ENSVVUG00000017820SMARCA49287.362ENSSLDG00000023663-9787.768Seriola_lalandi_dorsalis
ENSVVUG00000017820SMARCA49786.775ENSSLDG00000024486smarca4a10085.337Seriola_lalandi_dorsalis
ENSVVUG00000017820SMARCA462100.000ENSSARG00000013477SMARCA482100.000Sorex_araneus
ENSVVUG00000017820SMARCA49292.537ENSSPUG00000004558SMARCA49892.482Sphenodon_punctatus
ENSVVUG00000017820SMARCA49786.292ENSSPAG00000004248smarca4a10085.301Stegastes_partitus
ENSVVUG00000017820SMARCA49783.640ENSSPAG00000012533-9982.998Stegastes_partitus
ENSVVUG00000017820SMARCA49799.567ENSSSCG00000013629SMARCA410099.567Sus_scrofa
ENSVVUG00000017820SMARCA45190.403ENSTGUG00000015488-9990.403Taeniopygia_guttata
ENSVVUG00000017820SMARCA48781.527ENSTRUG00000004885smarca4a10081.403Takifugu_rubripes
ENSVVUG00000017820SMARCA49282.743ENSTRUG00000001378SMARCA49883.249Takifugu_rubripes
ENSVVUG00000017820SMARCA47185.461ENSTNIG00000004859-10084.043Tetraodon_nigroviridis
ENSVVUG00000017820SMARCA49783.262ENSTNIG00000004536SMARCA410083.700Tetraodon_nigroviridis
ENSVVUG00000017820SMARCA49795.932ENSTTRG00000009519SMARCA410095.932Tursiops_truncatus
ENSVVUG00000017820SMARCA49799.938ENSUAMG00000014661SMARCA410099.938Ursus_americanus
ENSVVUG00000017820SMARCA49897.720ENSUMAG00000022005SMARCA499100.000Ursus_maritimus
ENSVVUG00000017820SMARCA49786.642ENSXETG00000009355smarca49987.488Xenopus_tropicalis
ENSVVUG00000017820SMARCA49784.412ENSXMAG00000007030-9983.902Xiphophorus_maculatus
ENSVVUG00000017820SMARCA49786.569ENSXMAG00000006321smarca4a10086.707Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us