EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000017971 (Gene tree)
Gene ID: -
Gene Symbol: SNRPN
Alias: HCERN3|PWCR|RT-LI|SM-D|SMN|SNRNP-N|SNURF-SNRPN
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 15482 bases
Position: chrNBDQ01000221.1:98162-113643
Accession: 11164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000024527	LSM	PF01423.22	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000032421	SNRPN-201	1101	-	ENSVVUP00000024527	244 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000017971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000017971's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000017971	SNRPN	91	91.855	ENSVVUG00000025654	-	95	91.703
ENSVVUG00000017971	SNRPN	92	75.771	ENSVVUG00000010086	-	93	76.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000017971	SNRPN	94	99.563	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSVVUG00000017971	SNRPN	93	100.000	ENSAMEG00000007034	SNRPN	93	100.000	Ailuropoda_melanoleuca
ENSVVUG00000017971	SNRPN	98	97.083	ENSANAG00000034241	SNRPN	95	99.563	Aotus_nancymaae
ENSVVUG00000017971	SNRPN	94	99.127	ENSBTAG00000008251	SNRPN	100	99.099	Bos_taurus
ENSVVUG00000017971	SNRPN	94	98.261	ENSCJAG00000042622	-	96	98.261	Callithrix_jacchus
ENSVVUG00000017971	SNRPN	94	99.563	ENSCJAG00000003759	-	95	99.563	Callithrix_jacchus
ENSVVUG00000017971	SNRPN	94	100.000	ENSCAFG00000010127	SNRPN	95	100.000	Canis_familiaris
ENSVVUG00000017971	SNRPN	97	100.000	ENSCAFG00020024075	SNRPN	95	100.000	Canis_lupus_dingo
ENSVVUG00000017971	SNRPN	94	99.130	ENSCHIG00000017477	SNRPN	100	99.130	Capra_hircus
ENSVVUG00000017971	SNRPN	94	99.563	ENSTSYG00000005248	SNRPN	95	99.563	Carlito_syrichta
ENSVVUG00000017971	SNRPN	94	99.563	ENSCAPG00000003047	SNRPN	95	99.563	Cavia_aperea
ENSVVUG00000017971	SNRPN	94	99.563	ENSCPOG00000020270	SNRPN	95	99.563	Cavia_porcellus
ENSVVUG00000017971	SNRPN	94	99.563	ENSCCAG00000024231	SNRPN	95	99.563	Cebus_capucinus
ENSVVUG00000017971	SNRPN	94	99.563	ENSCATG00000032518	SNRPN	95	99.563	Cercocebus_atys
ENSVVUG00000017971	SNRPN	94	99.563	ENSCLAG00000011376	SNRPN	95	99.563	Chinchilla_lanigera
ENSVVUG00000017971	SNRPN	94	99.563	ENSCSAG00000006406	SNRPN	95	99.563	Chlorocebus_sabaeus
ENSVVUG00000017971	SNRPN	91	98.206	ENSCHOG00000001846	SNRPN	84	98.206	Choloepus_hoffmanni
ENSVVUG00000017971	SNRPN	94	99.563	ENSCANG00000041156	SNRPN	95	99.563	Colobus_angolensis_palliatus
ENSVVUG00000017971	SNRPN	94	99.127	ENSCGRG00001004136	Snrpn	95	99.127	Cricetulus_griseus_chok1gshd
ENSVVUG00000017971	SNRPN	94	98.690	ENSCGRG00000001621	Snrpn	95	98.690	Cricetulus_griseus_crigri
ENSVVUG00000017971	SNRPN	71	92.486	ENSCVAG00000014193	SNRPN	69	92.857	Cyprinodon_variegatus
ENSVVUG00000017971	SNRPN	93	98.684	ENSDNOG00000037060	SNRPN	93	98.684	Dasypus_novemcinctus
ENSVVUG00000017971	SNRPN	94	99.127	ENSDORG00000004527	Snrpn	95	99.127	Dipodomys_ordii
ENSVVUG00000017971	SNRPN	94	100.000	ENSEASG00005017871	SNRPN	95	100.000	Equus_asinus_asinus
ENSVVUG00000017971	SNRPN	94	100.000	ENSECAG00000018148	SNRPN	95	100.000	Equus_caballus
ENSVVUG00000017971	SNRPN	93	99.123	ENSEEUG00000007440	-	95	99.123	Erinaceus_europaeus
ENSVVUG00000017971	SNRPN	98	98.319	ENSFCAG00000022298	-	100	98.319	Felis_catus
ENSVVUG00000017971	SNRPN	94	99.127	ENSFDAG00000016578	-	95	99.127	Fukomys_damarensis
ENSVVUG00000017971	SNRPN	75	85.792	ENSFDAG00000010528	-	86	83.333	Fukomys_damarensis
ENSVVUG00000017971	SNRPN	74	76.243	ENSGMOG00000018161	SNRPN	93	73.239	Gadus_morhua
ENSVVUG00000017971	SNRPN	88	73.023	ENSGGOG00000024469	-	93	74.634	Gorilla_gorilla
ENSVVUG00000017971	SNRPN	94	99.563	ENSGGOG00000003988	SNRPN	95	99.563	Gorilla_gorilla
ENSVVUG00000017971	SNRPN	88	80.930	ENSHGLG00000020936	-	88	80.282	Heterocephalus_glaber_female
ENSVVUG00000017971	SNRPN	94	99.563	ENSHGLG00000011924	SNRPN	95	99.563	Heterocephalus_glaber_female
ENSVVUG00000017971	SNRPN	87	90.141	ENSHGLG00000019812	-	89	90.610	Heterocephalus_glaber_female
ENSVVUG00000017971	SNRPN	94	85.590	ENSHGLG00000002327	-	95	85.153	Heterocephalus_glaber_female
ENSVVUG00000017971	SNRPN	87	90.141	ENSHGLG00100021056	-	89	90.610	Heterocephalus_glaber_male
ENSVVUG00000017971	SNRPN	94	99.563	ENSHGLG00100016559	SNRPN	95	99.563	Heterocephalus_glaber_male
ENSVVUG00000017971	SNRPN	94	82.969	ENSHGLG00100004881	-	95	83.406	Heterocephalus_glaber_male
ENSVVUG00000017971	SNRPN	94	99.563	ENSSTOG00000001339	SNRPN	95	99.563	Ictidomys_tridecemlineatus
ENSVVUG00000017971	SNRPN	93	99.123	ENSLAFG00000009458	SNRPN	95	99.123	Loxodonta_africana
ENSVVUG00000017971	SNRPN	99	96.680	ENSMFAG00000042235	SNRPN	99	96.680	Macaca_fascicularis
ENSVVUG00000017971	SNRPN	99	96.680	ENSMMUG00000023139	SNURF	99	96.680	Macaca_mulatta
ENSVVUG00000017971	SNRPN	94	99.563	ENSMNEG00000031291	SNRPN	95	99.563	Macaca_nemestrina
ENSVVUG00000017971	SNRPN	94	99.563	ENSMLEG00000038837	SNRPN	95	99.563	Mandrillus_leucophaeus
ENSVVUG00000017971	SNRPN	90	85.455	ENSMGAG00000008696	SNRPN	95	85.526	Meleagris_gallopavo
ENSVVUG00000017971	SNRPN	94	99.563	ENSMAUG00000000051	Snrpn	100	99.563	Mesocricetus_auratus
ENSVVUG00000017971	SNRPN	94	99.563	ENSMICG00000042356	SNRPN	95	99.563	Microcebus_murinus
ENSVVUG00000017971	SNRPN	94	99.563	ENSMOCG00000015350	Snrpn	95	99.563	Microtus_ochrogaster
ENSVVUG00000017971	SNRPN	91	93.665	ENSMODG00000013926	-	95	93.450	Monodelphis_domestica
ENSVVUG00000017971	SNRPN	94	99.563	MGP_CAROLIEiJ_G0029815	Snrpn	95	99.563	Mus_caroli
ENSVVUG00000017971	SNRPN	94	99.563	ENSMUSG00000102252	Snrpn	95	99.563	Mus_musculus
ENSVVUG00000017971	SNRPN	94	99.563	MGP_PahariEiJ_G0013040	Snrpn	95	99.563	Mus_pahari
ENSVVUG00000017971	SNRPN	94	99.563	MGP_SPRETEiJ_G0030918	Snrpn	95	99.563	Mus_spretus
ENSVVUG00000017971	SNRPN	86	50.711	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSVVUG00000017971	SNRPN	94	100.000	ENSMPUG00000014638	-	95	100.000	Mustela_putorius_furo
ENSVVUG00000017971	SNRPN	93	99.561	ENSMLUG00000023361	-	93	99.561	Myotis_lucifugus
ENSVVUG00000017971	SNRPN	84	60.784	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSVVUG00000017971	SNRPN	59	70.833	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSVVUG00000017971	SNRPN	94	99.563	ENSNGAG00000000181	Snrpn	95	99.563	Nannospalax_galili
ENSVVUG00000017971	SNRPN	94	82.533	ENSNLEG00000001376	SNRPN	95	82.533	Nomascus_leucogenys
ENSVVUG00000017971	SNRPN	94	99.127	ENSODEG00000013478	-	95	99.127	Octodon_degus
ENSVVUG00000017971	SNRPN	94	98.261	ENSODEG00000019708	-	97	98.261	Octodon_degus
ENSVVUG00000017971	SNRPN	94	98.690	ENSODEG00000020110	-	95	98.690	Octodon_degus
ENSVVUG00000017971	SNRPN	91	81.614	ENSODEG00000016065	-	87	82.609	Octodon_degus
ENSVVUG00000017971	SNRPN	94	99.130	ENSOCUG00000003532	-	95	99.130	Oryctolagus_cuniculus
ENSVVUG00000017971	SNRPN	72	92.045	ENSORLG00020007490	SNRPN	69	93.452	Oryzias_latipes_hni
ENSVVUG00000017971	SNRPN	72	92.045	ENSORLG00015003332	SNRPN	69	93.452	Oryzias_latipes_hsok
ENSVVUG00000017971	SNRPN	72	92.614	ENSOMEG00000002066	SNRPN	69	94.048	Oryzias_melastigma
ENSVVUG00000017971	SNRPN	94	99.563	ENSOGAG00000007392	SNRPN	95	99.563	Otolemur_garnettii
ENSVVUG00000017971	SNRPN	94	99.127	ENSOARG00000009080	SNRPN	95	99.127	Ovis_aries
ENSVVUG00000017971	SNRPN	91	71.622	ENSPPAG00000034049	-	86	71.770	Pan_paniscus
ENSVVUG00000017971	SNRPN	99	96.680	ENSPPAG00000027650	SNRPN	99	96.680	Pan_paniscus
ENSVVUG00000017971	SNRPN	89	62.963	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSVVUG00000017971	SNRPN	94	100.000	ENSPPRG00000019878	-	95	100.000	Panthera_pardus
ENSVVUG00000017971	SNRPN	99	97.510	ENSPTIG00000004537	SNRPN	95	99.563	Panthera_tigris_altaica
ENSVVUG00000017971	SNRPN	99	96.680	ENSPTRG00000006826	SNRPN	99	96.680	Pan_troglodytes
ENSVVUG00000017971	SNRPN	91	72.072	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSVVUG00000017971	SNRPN	94	99.563	ENSPANG00000020142	SNRPN	95	99.563	Papio_anubis
ENSVVUG00000017971	SNRPN	88	95.327	ENSPEMG00000020979	-	89	95.305	Peromyscus_maniculatus_bairdii
ENSVVUG00000017971	SNRPN	91	86.425	ENSPEMG00000013920	-	95	87.336	Peromyscus_maniculatus_bairdii
ENSVVUG00000017971	SNRPN	94	99.563	ENSPEMG00000012911	-	95	99.563	Peromyscus_maniculatus_bairdii
ENSVVUG00000017971	SNRPN	90	94.545	ENSPCIG00000004699	-	73	94.298	Phascolarctos_cinereus
ENSVVUG00000017971	SNRPN	71	92.486	ENSPMEG00000020674	SNRPN	69	93.452	Poecilia_mexicana
ENSVVUG00000017971	SNRPN	94	99.563	ENSPPYG00000006269	SNURF	95	99.563	Pongo_abelii
ENSVVUG00000017971	SNRPN	95	98.707	ENSPCOG00000014231	SNRPN	95	99.563	Propithecus_coquereli
ENSVVUG00000017971	SNRPN	94	99.563	ENSRNOG00000059764	Snrpn	95	99.563	Rattus_norvegicus
ENSVVUG00000017971	SNRPN	94	99.563	ENSRBIG00000041765	SNRPN	95	99.563	Rhinopithecus_bieti
ENSVVUG00000017971	SNRPN	94	99.563	ENSRROG00000035157	SNRPN	95	99.563	Rhinopithecus_roxellana
ENSVVUG00000017971	SNRPN	94	99.563	ENSSBOG00000000110	-	95	99.563	Saimiri_boliviensis_boliviensis
ENSVVUG00000017971	SNRPN	94	98.690	ENSSBOG00000024929	-	95	98.690	Saimiri_boliviensis_boliviensis
ENSVVUG00000017971	SNRPN	90	94.545	ENSSHAG00000010257	-	93	94.298	Sarcophilus_harrisii
ENSVVUG00000017971	SNRPN	93	77.193	ENSSARG00000000072	SNRPN	95	77.193	Sorex_araneus
ENSVVUG00000017971	SNRPN	94	99.563	ENSSSCG00000028124	SNRPN	98	99.561	Sus_scrofa
ENSVVUG00000017971	SNRPN	94	99.127	ENSTTRG00000010966	SNRPN	85	99.127	Tursiops_truncatus
ENSVVUG00000017971	SNRPN	96	98.298	ENSUAMG00000016284	SNRPN	82	98.298	Ursus_americanus
ENSVVUG00000017971	SNRPN	94	100.000	ENSUMAG00000025589	SNRPN	95	100.000	Ursus_maritimus