EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000018170 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribosomal L1 domain containing 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 10969 bases
Position: chrNBDQ01000045.1:6916600-6927568
Accession: 112923328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000024777	Ribosomal_L1	PF00687.21	5.8e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000032764	-	1473	XM_026016601	ENSVVUP00000024777	490 (aa)	XP_025858912	UPI000DF69A58

Gene Model

Click here to download ENSVVUG00000018170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000018170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000018170	-	95	80.819	ENSVVUG00000024962	-	93	78.678

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000018170	-	98	67.292	ENSG00000171490	RSL1D1	100	84.694	Homo_sapiens
ENSVVUG00000018170	-	51	47.200	ENSAPOG00000004544	rsl1d1	98	40.931	Acanthochromis_polyacanthus
ENSVVUG00000018170	-	95	86.695	ENSAMEG00000009570	RSL1D1	99	86.151	Ailuropoda_melanoleuca
ENSVVUG00000018170	-	61	40.134	ENSACIG00000006608	rsl1d1	72	44.915	Amphilophus_citrinellus
ENSVVUG00000018170	-	71	40.401	ENSATEG00000009247	rsl1d1	85	40.845	Anabas_testudineus
ENSVVUG00000018170	-	91	41.720	ENSAPLG00000004451	RSL1D1	99	41.720	Anas_platyrhynchos
ENSVVUG00000018170	-	99	62.986	ENSANAG00000026520	-	95	63.539	Aotus_nancymaae
ENSVVUG00000018170	-	94	65.517	ENSANAG00000028185	-	95	64.392	Aotus_nancymaae
ENSVVUG00000018170	-	94	70.043	ENSANAG00000034590	-	95	69.510	Aotus_nancymaae
ENSVVUG00000018170	-	71	41.143	ENSACLG00000017535	rsl1d1	91	40.323	Astatotilapia_calliptera
ENSVVUG00000018170	-	78	37.726	ENSAMXG00000008624	rsl1d1	97	36.919	Astyanax_mexicanus
ENSVVUG00000018170	-	100	70.876	ENSBTAG00000014588	RSL1D1	96	71.550	Bos_taurus
ENSVVUG00000018170	-	94	70.259	ENSCJAG00000042606	-	97	69.149	Callithrix_jacchus
ENSVVUG00000018170	-	94	70.474	ENSCJAG00000008375	-	97	69.362	Callithrix_jacchus
ENSVVUG00000018170	-	100	98.776	ENSCAFG00000018865	RSL1D1	100	98.776	Canis_familiaris
ENSVVUG00000018170	-	88	75.581	ENSCAFG00020002457	-	90	74.483	Canis_lupus_dingo
ENSVVUG00000018170	-	100	96.939	ENSCAFG00020024488	-	100	96.939	Canis_lupus_dingo
ENSVVUG00000018170	-	99	70.624	ENSCHIG00000018658	-	96	71.398	Capra_hircus
ENSVVUG00000018170	-	100	65.306	ENSCHIG00000009867	-	95	65.532	Capra_hircus
ENSVVUG00000018170	-	99	65.235	ENSTSYG00000009276	RSL1D1	95	65.328	Carlito_syrichta
ENSVVUG00000018170	-	95	64.882	ENSCPOG00000010630	RSL1D1	96	65.096	Cavia_porcellus
ENSVVUG00000018170	-	78	70.073	ENSCCAG00000025197	-	79	72.400	Cebus_capucinus
ENSVVUG00000018170	-	98	62.190	ENSCCAG00000031641	-	91	62.391	Cebus_capucinus
ENSVVUG00000018170	-	100	67.140	ENSCCAG00000017391	-	95	68.230	Cebus_capucinus
ENSVVUG00000018170	-	95	60.888	ENSCATG00000031153	RSL1D1	95	61.099	Cercocebus_atys
ENSVVUG00000018170	-	100	64.766	ENSCLAG00000010975	RSL1D1	97	66.808	Chinchilla_lanigera
ENSVVUG00000018170	-	96	67.660	ENSCSAG00000008255	RSL1D1	95	68.298	Chlorocebus_sabaeus
ENSVVUG00000018170	-	78	72.202	ENSCHOG00000010827	RSL1D1	76	73.106	Choloepus_hoffmanni
ENSVVUG00000018170	-	96	67.161	ENSCANG00000029202	RSL1D1	95	67.797	Colobus_angolensis_palliatus
ENSVVUG00000018170	-	98	53.027	ENSCGRG00001014989	Rsl1d1	98	54.489	Cricetulus_griseus_chok1gshd
ENSVVUG00000018170	-	98	53.027	ENSCGRG00000001905	Rsl1d1	98	54.489	Cricetulus_griseus_crigri
ENSVVUG00000018170	-	58	46.316	ENSCVAG00000000672	rsl1d1	83	41.429	Cyprinodon_variegatus
ENSVVUG00000018170	-	50	44.130	ENSDARG00000055868	rsl1d1	87	36.579	Danio_rerio
ENSVVUG00000018170	-	70	50.877	ENSDNOG00000047567	-	99	50.292	Dasypus_novemcinctus
ENSVVUG00000018170	-	96	65.063	ENSDNOG00000004601	-	92	66.886	Dasypus_novemcinctus
ENSVVUG00000018170	-	96	64.854	ENSDNOG00000040779	-	93	66.667	Dasypus_novemcinctus
ENSVVUG00000018170	-	98	48.866	ENSDORG00000013432	-	94	50.542	Dipodomys_ordii
ENSVVUG00000018170	-	93	78.043	ENSEASG00005011499	RSL1D1	94	78.017	Equus_asinus_asinus
ENSVVUG00000018170	-	93	78.478	ENSECAG00000025036	RSL1D1	94	78.448	Equus_caballus
ENSVVUG00000018170	-	74	82.796	ENSEEUG00000015569	-	80	82.796	Erinaceus_europaeus
ENSVVUG00000018170	-	56	46.237	ENSELUG00000019243	rsl1d1	95	39.370	Esox_lucius
ENSVVUG00000018170	-	100	83.096	ENSFCAG00000010114	RSL1D1	100	83.096	Felis_catus
ENSVVUG00000018170	-	93	40.541	ENSFALG00000003869	RSL1D1	93	39.496	Ficedula_albicollis
ENSVVUG00000018170	-	100	60.692	ENSFDAG00000011414	RSL1D1	96	60.888	Fukomys_damarensis
ENSVVUG00000018170	-	50	54.694	ENSGALG00000033690	RSL1D1	99	40.541	Gallus_gallus
ENSVVUG00000018170	-	51	47.012	ENSGAFG00000020794	rsl1d1	80	40.227	Gambusia_affinis
ENSVVUG00000018170	-	54	44.361	ENSGACG00000004483	rsl1d1	68	47.458	Gasterosteus_aculeatus
ENSVVUG00000018170	-	95	66.094	ENSGGOG00000013463	RSL1D1	95	67.872	Gorilla_gorilla
ENSVVUG00000018170	-	71	40.456	ENSHBUG00000001551	rsl1d1	90	39.733	Haplochromis_burtoni
ENSVVUG00000018170	-	100	58.859	ENSHGLG00000006774	RSL1D1	96	61.311	Heterocephalus_glaber_female
ENSVVUG00000018170	-	100	58.656	ENSHGLG00100017781	RSL1D1	96	61.099	Heterocephalus_glaber_male
ENSVVUG00000018170	-	82	38.235	ENSIPUG00000001677	rsl1d1	95	38.480	Ictalurus_punctatus
ENSVVUG00000018170	-	87	62.093	ENSSTOG00000015400	RSL1D1	99	64.186	Ictidomys_tridecemlineatus
ENSVVUG00000018170	-	92	55.947	ENSJJAG00000012115	Rsl1d1	94	57.111	Jaculus_jaculus
ENSVVUG00000018170	-	94	62.687	ENSLAFG00000013664	RSL1D1	93	63.655	Loxodonta_africana
ENSVVUG00000018170	-	93	67.974	ENSMFAG00000037288	RSL1D1	95	69.296	Macaca_fascicularis
ENSVVUG00000018170	-	93	67.974	ENSMMUG00000019632	RSL1D1	99	82.166	Macaca_mulatta
ENSVVUG00000018170	-	93	67.756	ENSMNEG00000044196	RSL1D1	95	69.083	Macaca_nemestrina
ENSVVUG00000018170	-	93	67.982	ENSMLEG00000042058	RSL1D1	95	68.443	Mandrillus_leucophaeus
ENSVVUG00000018170	-	71	41.429	ENSMAMG00000004385	rsl1d1	85	41.525	Mastacembelus_armatus
ENSVVUG00000018170	-	100	63.030	ENSMICG00000008229	RSL1D1	95	63.694	Microcebus_murinus
ENSVVUG00000018170	-	86	59.382	ENSMOCG00000017724	Rsl1d1	92	59.620	Microtus_ochrogaster
ENSVVUG00000018170	-	53	42.146	ENSMMOG00000003730	rsl1d1	79	45.798	Mola_mola
ENSVVUG00000018170	-	55	51.111	ENSMODG00000029494	-	55	55.042	Monodelphis_domestica
ENSVVUG00000018170	-	93	46.541	ENSMODG00000004625	-	100	46.541	Monodelphis_domestica
ENSVVUG00000018170	-	98	56.549	ENSMUSG00000005846	Rsl1d1	93	57.860	Mus_musculus
ENSVVUG00000018170	-	98	56.133	MGP_PahariEiJ_G0016164	Rsl1d1	93	55.531	Mus_pahari
ENSVVUG00000018170	-	98	56.549	MGP_SPRETEiJ_G0021352	Rsl1d1	93	57.860	Mus_spretus
ENSVVUG00000018170	-	100	85.513	ENSMPUG00000014548	RSL1D1	100	85.513	Mustela_putorius_furo
ENSVVUG00000018170	-	100	71.343	ENSMLUG00000000784	RSL1D1	94	72.979	Myotis_lucifugus
ENSVVUG00000018170	-	93	61.354	ENSNGAG00000009086	-	93	61.641	Nannospalax_galili
ENSVVUG00000018170	-	94	61.522	ENSNGAG00000013578	-	99	61.842	Nannospalax_galili
ENSVVUG00000018170	-	55	45.055	ENSNBRG00000002777	rsl1d1	85	41.193	Neolamprologus_brichardi
ENSVVUG00000018170	-	71	67.330	ENSNLEG00000012149	-	93	67.787	Nomascus_leucogenys
ENSVVUG00000018170	-	96	68.710	ENSNLEG00000010196	-	95	69.787	Nomascus_leucogenys
ENSVVUG00000018170	-	99	61.680	ENSOPRG00000004442	-	94	61.422	Ochotona_princeps
ENSVVUG00000018170	-	56	45.985	ENSONIG00000019757	rsl1d1	89	40.341	Oreochromis_niloticus
ENSVVUG00000018170	-	87	43.590	ENSOANG00000009408	-	99	42.889	Ornithorhynchus_anatinus
ENSVVUG00000018170	-	97	64.346	ENSOCUG00000004751	RSL1D1	96	65.812	Oryctolagus_cuniculus
ENSVVUG00000018170	-	63	42.038	ENSORLG00020006636	rsl1d1	68	46.610	Oryzias_latipes_hni
ENSVVUG00000018170	-	100	66.600	ENSOGAG00000015151	RSL1D1	95	66.737	Otolemur_garnettii
ENSVVUG00000018170	-	100	72.098	ENSOARG00000006923	RSL1D1	96	72.611	Ovis_aries
ENSVVUG00000018170	-	98	67.292	ENSPPAG00000039716	RSL1D1	95	68.723	Pan_paniscus
ENSVVUG00000018170	-	100	83.503	ENSPPRG00000005220	RSL1D1	100	83.503	Panthera_pardus
ENSVVUG00000018170	-	94	82.174	ENSPTIG00000005526	RSL1D1	94	82.391	Panthera_tigris_altaica
ENSVVUG00000018170	-	98	67.083	ENSPTRG00000007777	RSL1D1	95	68.511	Pan_troglodytes
ENSVVUG00000018170	-	93	67.982	ENSPANG00000023073	RSL1D1	95	69.083	Papio_anubis
ENSVVUG00000018170	-	82	41.304	ENSPSIG00000011642	RSL1D1	99	41.116	Pelodiscus_sinensis
ENSVVUG00000018170	-	50	47.131	ENSPMGG00000022261	rsl1d1	98	38.551	Periophthalmus_magnuspinnatus
ENSVVUG00000018170	-	98	56.250	ENSPEMG00000009523	Rsl1d1	93	57.642	Peromyscus_maniculatus_bairdii
ENSVVUG00000018170	-	79	48.843	ENSPCIG00000026851	-	90	48.395	Phascolarctos_cinereus
ENSVVUG00000018170	-	70	40.115	ENSPFOG00000005017	rsl1d1	92	41.547	Poecilia_formosa
ENSVVUG00000018170	-	57	44.245	ENSPLAG00000000482	rsl1d1	72	38.571	Poecilia_latipinna
ENSVVUG00000018170	-	52	45.136	ENSPREG00000016619	rsl1d1	76	38.728	Poecilia_reticulata
ENSVVUG00000018170	-	96	58.174	ENSPPYG00000019335	-	95	58.209	Pongo_abelii
ENSVVUG00000018170	-	94	67.957	ENSPPYG00000007112	RSL1D1	95	68.298	Pongo_abelii
ENSVVUG00000018170	-	83	68.939	ENSPCAG00000011264	-	78	72.222	Procavia_capensis
ENSVVUG00000018170	-	73	63.788	ENSPCOG00000022456	RSL1D1	93	63.361	Propithecus_coquereli
ENSVVUG00000018170	-	100	74.239	ENSPVAG00000005014	RSL1D1	96	75.745	Pteropus_vampyrus
ENSVVUG00000018170	-	76	37.903	ENSPNAG00000011848	rsl1d1	88	38.172	Pygocentrus_nattereri
ENSVVUG00000018170	-	93	57.081	ENSRNOG00000048608	Rsl1d1l1	92	56.645	Rattus_norvegicus
ENSVVUG00000018170	-	78	46.684	ENSRNOG00000032439	Rsl1d1	61	46.684	Rattus_norvegicus
ENSVVUG00000018170	-	93	57.081	ENSRNOG00000061236	LOC108348298	92	56.645	Rattus_norvegicus
ENSVVUG00000018170	-	97	67.782	ENSRBIG00000030317	RSL1D1	95	68.577	Rhinopithecus_bieti
ENSVVUG00000018170	-	98	67.568	ENSRROG00000033658	RSL1D1	95	68.577	Rhinopithecus_roxellana
ENSVVUG00000018170	-	100	51.626	ENSSBOG00000029329	-	88	59.367	Saimiri_boliviensis_boliviensis
ENSVVUG00000018170	-	98	63.693	ENSSBOG00000028384	-	97	64.179	Saimiri_boliviensis_boliviensis
ENSVVUG00000018170	-	94	69.612	ENSSBOG00000035910	-	95	69.083	Saimiri_boliviensis_boliviensis
ENSVVUG00000018170	-	52	43.846	ENSSMAG00000007957	rsl1d1	91	36.198	Scophthalmus_maximus
ENSVVUG00000018170	-	94	42.050	ENSSPUG00000007525	RSL1D1	98	41.632	Sphenodon_punctatus
ENSVVUG00000018170	-	95	72.059	ENSSSCG00000023984	RSL1D1	96	72.083	Sus_scrofa
ENSVVUG00000018170	-	50	55.918	ENSTGUG00000005174	RSL1D1	99	55.918	Taeniopygia_guttata
ENSVVUG00000018170	-	83	59.709	ENSTBEG00000014678	RSL1D1	99	59.951	Tupaia_belangeri
ENSVVUG00000018170	-	95	73.820	ENSTTRG00000011629	RSL1D1	96	73.830	Tursiops_truncatus
ENSVVUG00000018170	-	95	86.266	ENSUAMG00000004470	RSL1D1	100	85.743	Ursus_americanus
ENSVVUG00000018170	-	87	81.004	ENSUMAG00000003994	RSL1D1	100	81.004	Ursus_maritimus
ENSVVUG00000018170	-	94	42.038	ENSXETG00000033365	-	97	42.887	Xenopus_tropicalis
ENSVVUG00000018170	-	52	45.703	ENSXMAG00000025111	rsl1d1	70	46.939	Xiphophorus_maculatus