EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000018262 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 2717 bases
Position: chrNBDQ01000001.1:18584538-18587254
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000024933	RRM_1	PF00076.22	4.4e-18	1	1
ENSVVUP00000024934	RRM_1	PF00076.22	4.4e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000032944	-	875	-	ENSVVUP00000024934	130 (aa)	-	-
ENSVVUT00000032943	-	1169	-	ENSVVUP00000024933	130 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000018262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000018262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000018262	-	60	33.333	ENSVVUG00000017670	RBM3	73	37.879
ENSVVUG00000018262	-	83	42.105	ENSVVUG00000004660	RBMS3	64	41.558
ENSVVUG00000018262	-	51	36.364	ENSVVUG00000006737	-	76	36.364
ENSVVUG00000018262	-	64	42.308	ENSVVUG00000023733	ELAVL3	64	41.975
ENSVVUG00000018262	-	64	40.741	ENSVVUG00000021291	ELAVL2	65	40.741
ENSVVUG00000018262	-	69	86.667	ENSVVUG00000013078	-	67	86.667
ENSVVUG00000018262	-	68	86.517	ENSVVUG00000003252	-	95	72.414
ENSVVUG00000018262	-	72	44.444	ENSVVUG00000026988	-	70	44.444
ENSVVUG00000018262	-	92	44.444	ENSVVUG00000003187	-	66	44.444
ENSVVUG00000018262	-	64	40.741	ENSVVUG00000006175	ELAVL4	64	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000018262	-	83	89.815	ENSACAG00000006079	-	50	89.744	Anolis_carolinensis
ENSVVUG00000018262	-	71	89.130	ENSAMXG00000034719	-	96	76.471	Astyanax_mexicanus
ENSVVUG00000018262	-	69	86.667	ENSBTAG00000051439	-	57	86.667	Bos_taurus
ENSVVUG00000018262	-	91	98.305	ENSCHIG00000009150	-	96	98.291	Capra_hircus
ENSVVUG00000018262	-	83	88.889	ENSCVAG00000018670	si:dkey-205h23.2	51	88.889	Cyprinodon_variegatus
ENSVVUG00000018262	-	100	95.420	ENSECAG00000036983	-	100	95.420	Equus_caballus
ENSVVUG00000018262	-	69	92.222	ENSGALG00000048972	-	83	92.222	Gallus_gallus
ENSVVUG00000018262	-	62	62.500	ENSNBRG00000010123	-	75	62.500	Neolamprologus_brichardi
ENSVVUG00000018262	-	53	86.957	ENSOANG00000031583	-	100	86.957	Ornithorhynchus_anatinus
ENSVVUG00000018262	-	90	100.000	ENSPTIG00000005413	-	89	100.000	Panthera_tigris_altaica
ENSVVUG00000018262	-	71	89.130	ENSPKIG00000024667	-	96	76.471	Paramormyrops_kingsleyae
ENSVVUG00000018262	-	92	75.410	ENSPLAG00000013524	-	98	76.230	Poecilia_latipinna
ENSVVUG00000018262	-	90	82.906	ENSPLAG00000000224	-	96	82.906	Poecilia_latipinna
ENSVVUG00000018262	-	90	82.906	ENSPLAG00000015969	-	96	82.906	Poecilia_latipinna
ENSVVUG00000018262	-	92	75.410	ENSPMEG00000011603	-	98	76.230	Poecilia_mexicana
ENSVVUG00000018262	-	83	88.889	ENSSLDG00000015995	-	50	88.889	Seriola_lalandi_dorsalis
ENSVVUG00000018262	-	90	100.000	ENSUAMG00000025729	-	96	100.000	Ursus_americanus
ENSVVUG00000018262	-	90	100.000	ENSUMAG00000008820	-	96	100.000	Ursus_maritimus