EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000018268 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 24332 bases
Position: chrNBDQ01000001.1:18588113-18612444
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000024942	RRM_1	PF00076.22	1.4e-22	1	2
ENSVVUP00000024942	RRM_1	PF00076.22	1.4e-22	2	2
ENSVVUP00000024944	RRM_1	PF00076.22	7.6e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000032953	-	560	-	ENSVVUP00000024942	178 (aa)	-	-
ENSVVUT00000032956	-	634	-	ENSVVUP00000024944	140 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000018268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000018268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000018268	-	67	30.769	ENSVVUG00000021291	ELAVL2	51	30.769
ENSVVUG00000018268	-	75	30.075	ENSVVUG00000001047	-	50	30.769
ENSVVUG00000018268	-	58	37.037	ENSVVUG00000017670	RBM3	86	37.037
ENSVVUG00000018268	-	67	32.500	ENSVVUG00000002657	-	76	32.500
ENSVVUG00000018268	-	67	34.066	ENSVVUG00000026988	-	50	34.066
ENSVVUG00000018268	-	88	30.769	ENSVVUG00000006175	ELAVL4	60	30.769
ENSVVUG00000018268	-	72	80.328	ENSVVUG00000003242	-	62	80.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000018268	-	98	98.286	ENSG00000140488	CELF6	65	98.837	Homo_sapiens
ENSVVUG00000018268	-	88	82.278	ENSAPOG00000019202	si:dkey-205h23.2	53	82.278	Acanthochromis_polyacanthus
ENSVVUG00000018268	-	88	82.278	ENSACIG00000003650	si:dkey-205h23.2	55	82.278	Amphilophus_citrinellus
ENSVVUG00000018268	-	88	82.278	ENSAOCG00000000908	si:dkey-205h23.2	53	82.278	Amphiprion_ocellaris
ENSVVUG00000018268	-	88	82.278	ENSAPEG00000009237	si:dkey-205h23.2	53	82.278	Amphiprion_percula
ENSVVUG00000018268	-	98	97.714	ENSANAG00000025788	-	51	97.714	Aotus_nancymaae
ENSVVUG00000018268	-	88	82.278	ENSACLG00000016215	si:dkey-205h23.2	53	82.278	Astatotilapia_calliptera
ENSVVUG00000018268	-	76	85.294	ENSBTAG00000021774	CELF5	80	85.294	Bos_taurus
ENSVVUG00000018268	-	98	98.857	ENSBTAG00000014092	CELF6	51	98.857	Bos_taurus
ENSVVUG00000018268	-	98	97.143	ENSCJAG00000018355	-	51	97.143	Callithrix_jacchus
ENSVVUG00000018268	-	98	100.000	ENSCAFG00020006479	-	72	100.000	Canis_lupus_dingo
ENSVVUG00000018268	-	76	84.672	ENSCAFG00020018264	CELF5	62	80.328	Canis_lupus_dingo
ENSVVUG00000018268	-	98	98.857	ENSCHIG00000009150	-	50	98.857	Capra_hircus
ENSVVUG00000018268	-	72	80.328	ENSCCAG00000028950	-	69	80.328	Cebus_capucinus
ENSVVUG00000018268	-	98	97.714	ENSCCAG00000023274	-	51	97.714	Cebus_capucinus
ENSVVUG00000018268	-	98	97.714	ENSCATG00000042282	-	51	97.714	Cercocebus_atys
ENSVVUG00000018268	-	68	76.768	ENSCSAG00000017935	-	69	76.768	Chlorocebus_sabaeus
ENSVVUG00000018268	-	94	68.382	ENSCPBG00000015256	-	85	68.382	Chrysemys_picta_bellii
ENSVVUG00000018268	-	79	81.690	ENSCPBG00000010903	CELF5	76	78.333	Chrysemys_picta_bellii
ENSVVUG00000018268	-	98	98.286	ENSCGRG00001012872	Celf6	50	98.286	Cricetulus_griseus_chok1gshd
ENSVVUG00000018268	-	96	97.076	ENSCGRG00000001688	Celf6	50	97.076	Cricetulus_griseus_crigri
ENSVVUG00000018268	-	88	82.278	ENSCSEG00000007749	si:dkey-205h23.2	52	82.278	Cynoglossus_semilaevis
ENSVVUG00000018268	-	72	81.818	ENSDARG00000090727	celf5b	58	81.395	Danio_rerio
ENSVVUG00000018268	-	72	84.091	ENSDNOG00000043624	CELF5	55	84.091	Dasypus_novemcinctus
ENSVVUG00000018268	-	82	97.260	ENSDORG00000004882	Celf6	50	97.260	Dipodomys_ordii
ENSVVUG00000018268	-	66	80.851	ENSEBUG00000013374	-	81	80.851	Eptatretus_burgeri
ENSVVUG00000018268	-	69	77.000	ENSEBUG00000011155	-	60	77.000	Eptatretus_burgeri
ENSVVUG00000018268	-	98	98.857	ENSEASG00005005374	-	51	98.857	Equus_asinus_asinus
ENSVVUG00000018268	-	72	80.328	ENSEASG00005022118	-	72	80.328	Equus_asinus_asinus
ENSVVUG00000018268	-	100	98.315	ENSECAG00000035617	-	100	98.315	Equus_caballus
ENSVVUG00000018268	-	98	98.857	ENSFCAG00000016249	-	51	98.857	Felis_catus
ENSVVUG00000018268	-	64	80.645	ENSFALG00000009186	-	74	80.645	Ficedula_albicollis
ENSVVUG00000018268	-	88	82.278	ENSFHEG00000023111	-	55	82.278	Fundulus_heteroclitus
ENSVVUG00000018268	-	82	72.269	ENSGALG00000038930	-	65	72.269	Gallus_gallus
ENSVVUG00000018268	-	88	82.278	ENSGAFG00000010304	si:dkey-205h23.2	53	82.278	Gambusia_affinis
ENSVVUG00000018268	-	84	68.644	ENSGAGG00000016824	-	59	68.889	Gopherus_agassizii
ENSVVUG00000018268	-	98	98.286	ENSGGOG00000015463	-	51	98.286	Gorilla_gorilla
ENSVVUG00000018268	-	88	82.278	ENSHBUG00000001878	si:dkey-205h23.2	53	82.278	Haplochromis_burtoni
ENSVVUG00000018268	-	98	96.000	ENSHGLG00000014655	-	50	96.000	Heterocephalus_glaber_female
ENSVVUG00000018268	-	88	83.019	ENSHCOG00000021105	si:dkey-205h23.2	55	83.019	Hippocampus_comes
ENSVVUG00000018268	-	88	84.177	ENSIPUG00000010527	si:dkey-205h23.2	53	84.177	Ictalurus_punctatus
ENSVVUG00000018268	-	98	96.591	ENSJJAG00000016114	Celf6	50	96.591	Jaculus_jaculus
ENSVVUG00000018268	-	88	82.278	ENSLBEG00000011338	si:dkey-205h23.2	55	82.278	Labrus_bergylta
ENSVVUG00000018268	-	63	60.674	ENSLACG00000002119	-	92	60.227	Latimeria_chalumnae
ENSVVUG00000018268	-	61	61.111	ENSLACG00000016312	-	73	61.111	Latimeria_chalumnae
ENSVVUG00000018268	-	63	60.870	ENSLOCG00000017522	-	99	60.215	Lepisosteus_oculatus
ENSVVUG00000018268	-	98	97.714	ENSMFAG00000002682	-	51	97.714	Macaca_fascicularis
ENSVVUG00000018268	-	98	97.714	ENSMNEG00000033740	-	51	97.714	Macaca_nemestrina
ENSVVUG00000018268	-	88	82.278	ENSMAMG00000003343	-	55	82.278	Mastacembelus_armatus
ENSVVUG00000018268	-	88	82.278	ENSMZEG00005007126	si:dkey-205h23.2	53	82.278	Maylandia_zebra
ENSVVUG00000018268	-	98	98.286	ENSMAUG00000012641	Celf6	50	98.286	Mesocricetus_auratus
ENSVVUG00000018268	-	98	96.571	ENSMICG00000027918	-	51	96.571	Microcebus_murinus
ENSVVUG00000018268	-	76	84.672	ENSMICG00000003506	CELF5	70	80.328	Microcebus_murinus
ENSVVUG00000018268	-	98	96.571	ENSMOCG00000002573	Celf6	50	96.571	Microtus_ochrogaster
ENSVVUG00000018268	-	88	62.366	ENSMMOG00000016498	si:dkey-205h23.2	56	62.366	Mola_mola
ENSVVUG00000018268	-	99	97.175	MGP_CAROLIEiJ_G0032305	Celf6	97	97.175	Mus_caroli
ENSVVUG00000018268	-	76	84.672	MGP_CAROLIEiJ_G0015643	-	93	80.328	Mus_caroli
ENSVVUG00000018268	-	99	97.175	ENSMUSG00000032297	Celf6	97	97.175	Mus_musculus
ENSVVUG00000018268	-	99	97.175	MGP_PahariEiJ_G0015171	Celf6	97	97.175	Mus_pahari
ENSVVUG00000018268	-	76	84.672	MGP_PahariEiJ_G0031056	-	93	80.328	Mus_pahari
ENSVVUG00000018268	-	99	97.175	MGP_SPRETEiJ_G0033445	Celf6	97	97.175	Mus_spretus
ENSVVUG00000018268	-	98	95.429	ENSMLUG00000030643	-	50	95.429	Myotis_lucifugus
ENSVVUG00000018268	-	72	80.328	ENSNGAG00000019694	-	74	80.328	Nannospalax_galili
ENSVVUG00000018268	-	98	97.714	ENSNGAG00000017427	Celf6	50	97.714	Nannospalax_galili
ENSVVUG00000018268	-	88	82.278	ENSNBRG00000010105	si:dkey-205h23.2	55	82.278	Neolamprologus_brichardi
ENSVVUG00000018268	-	98	98.286	ENSNLEG00000013917	-	51	98.286	Nomascus_leucogenys
ENSVVUG00000018268	-	76	82.353	ENSONIG00000004856	celf5a	58	81.818	Oreochromis_niloticus
ENSVVUG00000018268	-	72	80.328	ENSOANG00000009501	-	84	80.328	Ornithorhynchus_anatinus
ENSVVUG00000018268	-	88	82.278	ENSORLG00000013392	si:dkey-205h23.2	55	82.278	Oryzias_latipes
ENSVVUG00000018268	-	88	82.278	ENSORLG00020021262	si:dkey-205h23.2	55	82.278	Oryzias_latipes_hni
ENSVVUG00000018268	-	88	82.278	ENSORLG00015019715	si:dkey-205h23.2	55	82.278	Oryzias_latipes_hsok
ENSVVUG00000018268	-	88	82.278	ENSOMEG00000015364	si:dkey-205h23.2	55	82.278	Oryzias_melastigma
ENSVVUG00000018268	-	98	98.286	ENSOGAG00000031801	-	51	98.286	Otolemur_garnettii
ENSVVUG00000018268	-	98	98.286	ENSPPAG00000042321	-	51	98.286	Pan_paniscus
ENSVVUG00000018268	-	98	98.857	ENSPPRG00000021783	-	51	98.857	Panthera_pardus
ENSVVUG00000018268	-	94	98.802	ENSPTIG00000005511	-	100	98.802	Panthera_tigris_altaica
ENSVVUG00000018268	-	98	98.286	ENSPTRG00000034360	-	51	98.286	Pan_troglodytes
ENSVVUG00000018268	-	98	97.714	ENSPANG00000016205	-	51	97.714	Papio_anubis
ENSVVUG00000018268	-	88	82.911	ENSPKIG00000004198	si:dkey-205h23.2	50	75.287	Paramormyrops_kingsleyae
ENSVVUG00000018268	-	88	81.013	ENSPKIG00000019554	-	53	81.013	Paramormyrops_kingsleyae
ENSVVUG00000018268	-	70	66.102	ENSPKIG00000024672	-	65	66.102	Paramormyrops_kingsleyae
ENSVVUG00000018268	-	52	84.783	ENSPSIG00000007119	-	85	84.783	Pelodiscus_sinensis
ENSVVUG00000018268	-	64	74.194	ENSPSIG00000015573	-	74	74.194	Pelodiscus_sinensis
ENSVVUG00000018268	-	98	97.714	ENSPEMG00000013842	Celf6	50	98.266	Peromyscus_maniculatus_bairdii
ENSVVUG00000018268	-	98	74.752	ENSPCIG00000016305	-	52	74.752	Phascolarctos_cinereus
ENSVVUG00000018268	-	63	58.065	ENSPFOG00000024694	-	95	58.065	Poecilia_formosa
ENSVVUG00000018268	-	72	78.689	ENSPLAG00000013501	celf5a	76	78.689	Poecilia_latipinna
ENSVVUG00000018268	-	72	78.689	ENSPMEG00000011632	-	79	78.689	Poecilia_mexicana
ENSVVUG00000018268	-	98	97.714	ENSPCOG00000018535	-	51	97.714	Propithecus_coquereli
ENSVVUG00000018268	-	88	82.278	ENSPNYG00000011474	si:dkey-205h23.2	53	82.278	Pundamilia_nyererei
ENSVVUG00000018268	-	88	82.278	ENSPNAG00000029884	si:dkey-205h23.2	55	82.278	Pygocentrus_nattereri
ENSVVUG00000018268	-	98	98.286	ENSRNOG00000052224	Celf6	50	98.286	Rattus_norvegicus
ENSVVUG00000018268	-	64	79.570	ENSRNOG00000049802	AABR07031533.1	57	79.570	Rattus_norvegicus
ENSVVUG00000018268	-	98	97.714	ENSRROG00000038113	-	51	97.714	Rhinopithecus_roxellana
ENSVVUG00000018268	-	72	80.328	ENSSBOG00000036241	-	76	80.328	Saimiri_boliviensis_boliviensis
ENSVVUG00000018268	-	64	83.871	ENSSHAG00000008992	-	98	83.871	Sarcophilus_harrisii
ENSVVUG00000018268	-	88	82.911	ENSSMAG00000008575	-	54	82.911	Scophthalmus_maximus
ENSVVUG00000018268	-	88	82.278	ENSSDUG00000005607	si:dkey-205h23.2	53	82.278	Seriola_dumerili
ENSVVUG00000018268	-	83	72.650	ENSSPAG00000007933	-	88	72.650	Stegastes_partitus
ENSVVUG00000018268	-	98	98.857	ENSSSCG00000001928	-	50	98.857	Sus_scrofa
ENSVVUG00000018268	-	64	80.645	ENSTGUG00000001647	-	76	80.645	Taeniopygia_guttata
ENSVVUG00000018268	-	88	82.278	ENSTRUG00000012391	si:dkey-205h23.2	53	82.278	Takifugu_rubripes
ENSVVUG00000018268	-	100	98.876	ENSUAMG00000025727	-	100	98.876	Ursus_americanus
ENSVVUG00000018268	-	53	65.823	ENSUAMG00000025536	-	61	65.823	Ursus_americanus
ENSVVUG00000018268	-	53	65.823	ENSUMAG00000002210	-	61	65.823	Ursus_maritimus
ENSVVUG00000018268	-	88	82.278	ENSXMAG00000018769	si:dkey-205h23.2	55	82.278	Xiphophorus_maculatus