EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000018297 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Plus strand
Length: 1094 bases
Position: chrNBDQ01000004.1:12253371-12254464
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000024977	LSM	PF01423.22	6.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000033007	-	1094	-	ENSVVUP00000024977	309 (aa)	-	-

Gene Model

Click here to download ENSVVUG00000018297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000018297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000018297	-	52	43.902	ENSVVUG00000025654	-	62	43.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000018297	-	52	43.713	ENSG00000125835	SNRPB	73	100.000	Homo_sapiens
ENSVVUG00000018297	-	86	40.972	ENSAMEG00000011353	SNRPB	95	40.972	Ailuropoda_melanoleuca
ENSVVUG00000018297	-	52	43.713	ENSANAG00000024443	-	64	43.713	Aotus_nancymaae
ENSVVUG00000018297	-	75	45.098	ENSBTAG00000001038	SNRPB	98	45.098	Bos_taurus
ENSVVUG00000018297	-	52	43.713	ENSCJAG00000020971	-	64	43.713	Callithrix_jacchus
ENSVVUG00000018297	-	52	43.713	ENSCJAG00000023097	-	62	43.713	Callithrix_jacchus
ENSVVUG00000018297	-	52	43.713	ENSCAFG00000006693	-	64	43.713	Canis_familiaris
ENSVVUG00000018297	-	52	43.713	ENSCAFG00020016981	-	62	43.713	Canis_lupus_dingo
ENSVVUG00000018297	-	52	43.713	ENSCHIG00000025449	-	64	43.713	Capra_hircus
ENSVVUG00000018297	-	52	43.713	ENSTSYG00000014498	-	64	43.713	Carlito_syrichta
ENSVVUG00000018297	-	52	43.373	ENSCAPG00000012669	SNRPB	64	43.373	Cavia_aperea
ENSVVUG00000018297	-	52	43.713	ENSCPOG00000039408	SNRPB	64	43.713	Cavia_porcellus
ENSVVUG00000018297	-	52	43.713	ENSCCAG00000026002	SNRPB	64	43.713	Cebus_capucinus
ENSVVUG00000018297	-	52	43.713	ENSCATG00000030230	SNRPB	64	43.713	Cercocebus_atys
ENSVVUG00000018297	-	52	43.713	ENSCLAG00000012442	SNRPB	62	43.713	Chinchilla_lanigera
ENSVVUG00000018297	-	52	43.713	ENSCSAG00000010840	SNRPB	64	43.713	Chlorocebus_sabaeus
ENSVVUG00000018297	-	52	43.713	ENSCANG00000019461	SNRPB	61	100.000	Colobus_angolensis_palliatus
ENSVVUG00000018297	-	52	43.713	ENSCGRG00001023046	Snrpb	64	43.713	Cricetulus_griseus_chok1gshd
ENSVVUG00000018297	-	52	43.713	ENSDNOG00000015545	-	62	43.713	Dasypus_novemcinctus
ENSVVUG00000018297	-	72	35.270	ENSDNOG00000007896	-	93	35.270	Dasypus_novemcinctus
ENSVVUG00000018297	-	52	43.713	ENSEASG00005012991	SNRPB	64	43.713	Equus_asinus_asinus
ENSVVUG00000018297	-	52	43.713	ENSECAG00000011944	SNRPB	64	43.713	Equus_caballus
ENSVVUG00000018297	-	87	38.776	ENSEEUG00000015568	SNRPB	95	38.776	Erinaceus_europaeus
ENSVVUG00000018297	-	52	43.713	ENSFCAG00000034090	-	64	43.713	Felis_catus
ENSVVUG00000018297	-	52	43.713	ENSFDAG00000009937	SNRPB	64	43.713	Fukomys_damarensis
ENSVVUG00000018297	-	52	43.713	ENSGGOG00000016138	SNRPB	64	43.713	Gorilla_gorilla
ENSVVUG00000018297	-	52	43.713	ENSHGLG00000016241	-	64	43.713	Heterocephalus_glaber_female
ENSVVUG00000018297	-	52	43.713	ENSHGLG00100012877	-	64	43.713	Heterocephalus_glaber_male
ENSVVUG00000018297	-	72	36.885	ENSSTOG00000033664	-	94	36.885	Ictidomys_tridecemlineatus
ENSVVUG00000018297	-	52	43.713	ENSJJAG00000024170	Snrpb	64	43.713	Jaculus_jaculus
ENSVVUG00000018297	-	52	43.713	ENSMFAG00000038756	SNRPB	64	43.713	Macaca_fascicularis
ENSVVUG00000018297	-	52	43.713	ENSMMUG00000010050	SNRPB	98	36.545	Macaca_mulatta
ENSVVUG00000018297	-	52	43.713	ENSMNEG00000027954	SNRPB	64	43.713	Macaca_nemestrina
ENSVVUG00000018297	-	52	43.713	ENSMLEG00000022346	SNRPB	64	43.713	Mandrillus_leucophaeus
ENSVVUG00000018297	-	52	43.713	ENSMICG00000016519	SNRPB	64	43.713	Microcebus_murinus
ENSVVUG00000018297	-	52	43.713	MGP_CAROLIEiJ_G0024293	Snrpb	73	100.000	Mus_caroli
ENSVVUG00000018297	-	52	43.713	ENSMUSG00000027404	Snrpb	73	100.000	Mus_musculus
ENSVVUG00000018297	-	52	43.713	MGP_PahariEiJ_G0025738	Snrpb	73	100.000	Mus_pahari
ENSVVUG00000018297	-	52	43.713	MGP_SPRETEiJ_G0025213	Snrpb	72	100.000	Mus_spretus
ENSVVUG00000018297	-	52	43.713	ENSMPUG00000009283	SNRPB	64	43.713	Mustela_putorius_furo
ENSVVUG00000018297	-	52	43.713	ENSNGAG00000012051	Snrpb	64	43.713	Nannospalax_galili
ENSVVUG00000018297	-	52	43.713	ENSNLEG00000029067	SNRPB	62	43.713	Nomascus_leucogenys
ENSVVUG00000018297	-	52	43.976	ENSMEUG00000015625	SNRPB	65	43.976	Notamacropus_eugenii
ENSVVUG00000018297	-	52	43.713	ENSODEG00000004305	-	64	43.713	Octodon_degus
ENSVVUG00000018297	-	52	43.713	ENSOCUG00000014042	-	62	43.713	Oryctolagus_cuniculus
ENSVVUG00000018297	-	52	43.713	ENSOGAG00000016149	SNRPB	62	43.713	Otolemur_garnettii
ENSVVUG00000018297	-	52	43.713	ENSOARG00000006740	SNRPB	64	43.713	Ovis_aries
ENSVVUG00000018297	-	52	43.713	ENSPPAG00000036314	SNRPB	64	43.713	Pan_paniscus
ENSVVUG00000018297	-	52	43.713	ENSPPRG00000003233	-	64	43.713	Panthera_pardus
ENSVVUG00000018297	-	52	43.373	ENSPTIG00000007468	SNRPB	64	43.373	Panthera_tigris_altaica
ENSVVUG00000018297	-	52	43.713	ENSPTRG00000013176	SNRPB	64	43.713	Pan_troglodytes
ENSVVUG00000018297	-	52	43.713	ENSPANG00000020362	SNRPB	62	43.713	Papio_anubis
ENSVVUG00000018297	-	52	43.713	ENSPEMG00000007948	Snrpb	64	43.713	Peromyscus_maniculatus_bairdii
ENSVVUG00000018297	-	52	43.373	ENSPCIG00000004694	SNRPB	61	43.373	Phascolarctos_cinereus
ENSVVUG00000018297	-	52	43.713	ENSPPYG00000010841	SNRPB	64	43.713	Pongo_abelii
ENSVVUG00000018297	-	52	43.713	ENSPCOG00000013686	SNRPB	64	43.713	Propithecus_coquereli
ENSVVUG00000018297	-	87	41.017	ENSPVAG00000017013	SNRPB	95	41.017	Pteropus_vampyrus
ENSVVUG00000018297	-	52	43.713	ENSRNOG00000006961	Snrpb	72	100.000	Rattus_norvegicus
ENSVVUG00000018297	-	52	43.713	ENSRBIG00000040505	SNRPB	64	43.713	Rhinopithecus_bieti
ENSVVUG00000018297	-	52	43.713	ENSRROG00000036094	SNRPB	64	43.713	Rhinopithecus_roxellana
ENSVVUG00000018297	-	52	43.713	ENSSBOG00000027310	SNRPB	64	43.713	Saimiri_boliviensis_boliviensis
ENSVVUG00000018297	-	52	43.713	ENSSHAG00000010394	SNRPB	62	43.713	Sarcophilus_harrisii
ENSVVUG00000018297	-	52	43.713	ENSSSCG00000040857	-	64	43.713	Sus_scrofa
ENSVVUG00000018297	-	74	35.484	ENSXETG00000027266	snrpb	98	35.484	Xenopus_tropicalis