EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSVVUG00000018601 (Gene tree)
Gene ID: -
Gene Symbol: EDC3
Alias: FLJ21128|LSM16|YJDC|YJEFN2|hYjeF_N2-15q23
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 46712 bases
Position: chrNBDQ01000001.1:20538319-20585030
Accession: 112908520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000025370	FDF	PF09532.10	7.8e-19	1	1
ENSVVUP00000025376	FDF	PF09532.10	7.8e-19	1	1
ENSVVUP00000025370	LSM14	PF12701.7	9.5e-10	1	1
ENSVVUP00000025376	LSM14	PF12701.7	9.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000033586	EDC3-201	2099	-	ENSVVUP00000025370	508 (aa)	XP_025839870	UPI000DF6B9BF
ENSVVUT00000033598	EDC3-202	1918	-	ENSVVUP00000025376	508 (aa)	XP_025839870	UPI000DF6B9BF

Gene Model

Click here to download ENSVVUG00000018601's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000018601's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000018601	EDC3	100	96.654	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSVVUG00000018601	EDC3	100	55.534	ENSAPOG00000008655	EDC3	100	55.534	Acanthochromis_polyacanthus
ENSVVUG00000018601	EDC3	100	69.412	ENSAPOG00000010791	edc3	100	69.412	Acanthochromis_polyacanthus
ENSVVUG00000018601	EDC3	100	98.819	ENSAMEG00000008963	EDC3	100	98.819	Ailuropoda_melanoleuca
ENSVVUG00000018601	EDC3	99	59.649	ENSACIG00000005330	EDC3	99	59.649	Amphilophus_citrinellus
ENSVVUG00000018601	EDC3	100	68.173	ENSACIG00000017751	edc3	100	68.173	Amphilophus_citrinellus
ENSVVUG00000018601	EDC3	100	57.946	ENSAOCG00000009103	-	100	57.946	Amphiprion_ocellaris
ENSVVUG00000018601	EDC3	100	69.412	ENSAOCG00000005431	edc3	100	69.412	Amphiprion_ocellaris
ENSVVUG00000018601	EDC3	100	57.946	ENSAPEG00000007841	EDC3	100	57.946	Amphiprion_percula
ENSVVUG00000018601	EDC3	100	69.412	ENSAPEG00000000968	edc3	100	69.412	Amphiprion_percula
ENSVVUG00000018601	EDC3	100	69.155	ENSATEG00000015505	edc3	100	69.155	Anabas_testudineus
ENSVVUG00000018601	EDC3	100	58.286	ENSATEG00000004205	-	100	58.286	Anabas_testudineus
ENSVVUG00000018601	EDC3	90	86.813	ENSAPLG00000008957	EDC3	100	86.813	Anas_platyrhynchos
ENSVVUG00000018601	EDC3	78	87.406	ENSACAG00000000460	-	100	87.406	Anolis_carolinensis
ENSVVUG00000018601	EDC3	100	96.850	ENSANAG00000024078	EDC3	100	96.850	Aotus_nancymaae
ENSVVUG00000018601	EDC3	100	67.191	ENSACLG00000007232	edc3	100	67.191	Astatotilapia_calliptera
ENSVVUG00000018601	EDC3	100	57.977	ENSACLG00000018776	-	100	57.977	Astatotilapia_calliptera
ENSVVUG00000018601	EDC3	100	70.898	ENSAMXG00000001589	edc3	100	70.898	Astyanax_mexicanus
ENSVVUG00000018601	EDC3	100	97.047	ENSBTAG00000007308	EDC3	100	97.047	Bos_taurus
ENSVVUG00000018601	EDC3	100	97.047	ENSCJAG00000017681	EDC3	100	97.047	Callithrix_jacchus
ENSVVUG00000018601	EDC3	100	99.803	ENSCAFG00000017935	EDC3	100	99.803	Canis_familiaris
ENSVVUG00000018601	EDC3	100	99.803	ENSCAFG00020003909	EDC3	100	99.803	Canis_lupus_dingo
ENSVVUG00000018601	EDC3	100	96.850	ENSCHIG00000023658	EDC3	100	96.850	Capra_hircus
ENSVVUG00000018601	EDC3	100	96.850	ENSTSYG00000004822	EDC3	100	96.850	Carlito_syrichta
ENSVVUG00000018601	EDC3	100	94.882	ENSCPOG00000015595	EDC3	100	94.882	Cavia_porcellus
ENSVVUG00000018601	EDC3	100	97.244	ENSCCAG00000021663	EDC3	100	97.244	Cebus_capucinus
ENSVVUG00000018601	EDC3	100	97.244	ENSCATG00000037511	EDC3	100	97.244	Cercocebus_atys
ENSVVUG00000018601	EDC3	100	94.685	ENSCLAG00000005700	EDC3	100	94.685	Chinchilla_lanigera
ENSVVUG00000018601	EDC3	100	97.244	ENSCSAG00000014239	EDC3	100	97.244	Chlorocebus_sabaeus
ENSVVUG00000018601	EDC3	100	88.583	ENSCPBG00000024239	EDC3	100	88.583	Chrysemys_picta_bellii
ENSVVUG00000018601	EDC3	100	38.077	ENSCING00000022142	-	99	38.077	Ciona_intestinalis
ENSVVUG00000018601	EDC3	100	97.244	ENSCANG00000028699	EDC3	100	97.244	Colobus_angolensis_palliatus
ENSVVUG00000018601	EDC3	100	95.866	ENSCGRG00001013874	Edc3	100	95.866	Cricetulus_griseus_chok1gshd
ENSVVUG00000018601	EDC3	100	95.866	ENSCGRG00000011885	Edc3	100	95.866	Cricetulus_griseus_crigri
ENSVVUG00000018601	EDC3	99	69.488	ENSCSEG00000012996	edc3	99	69.488	Cynoglossus_semilaevis
ENSVVUG00000018601	EDC3	100	69.020	ENSCVAG00000008023	edc3	100	69.020	Cyprinodon_variegatus
ENSVVUG00000018601	EDC3	99	68.235	ENSDARG00000051931	edc3	99	68.616	Danio_rerio
ENSVVUG00000018601	EDC3	100	84.302	ENSDNOG00000030661	EDC3	100	84.302	Dasypus_novemcinctus
ENSVVUG00000018601	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSVVUG00000018601	EDC3	100	97.441	ENSEASG00005005071	EDC3	100	97.441	Equus_asinus_asinus
ENSVVUG00000018601	EDC3	100	97.441	ENSECAG00000017994	EDC3	100	97.441	Equus_caballus
ENSVVUG00000018601	EDC3	100	65.692	ENSELUG00000005794	edc3	100	65.692	Esox_lucius
ENSVVUG00000018601	EDC3	100	62.062	ENSELUG00000007607	EDC3	100	62.062	Esox_lucius
ENSVVUG00000018601	EDC3	100	98.228	ENSFCAG00000002014	EDC3	100	98.228	Felis_catus
ENSVVUG00000018601	EDC3	98	84.369	ENSFALG00000004543	EDC3	96	84.369	Ficedula_albicollis
ENSVVUG00000018601	EDC3	100	94.882	ENSFDAG00000012582	EDC3	100	94.882	Fukomys_damarensis
ENSVVUG00000018601	EDC3	100	69.020	ENSFHEG00000009375	edc3	100	69.020	Fundulus_heteroclitus
ENSVVUG00000018601	EDC3	100	67.836	ENSGMOG00000002715	edc3	100	68.164	Gadus_morhua
ENSVVUG00000018601	EDC3	100	88.189	ENSGALG00000040181	EDC3	100	88.189	Gallus_gallus
ENSVVUG00000018601	EDC3	100	67.583	ENSGAFG00000014433	edc3	100	67.647	Gambusia_affinis
ENSVVUG00000018601	EDC3	100	68.173	ENSGACG00000009783	edc3	100	68.173	Gasterosteus_aculeatus
ENSVVUG00000018601	EDC3	99	54.932	ENSGACG00000014671	EDC3	99	55.922	Gasterosteus_aculeatus
ENSVVUG00000018601	EDC3	100	88.189	ENSGAGG00000023477	EDC3	100	88.189	Gopherus_agassizii
ENSVVUG00000018601	EDC3	100	96.850	ENSGGOG00000003552	EDC3	100	96.850	Gorilla_gorilla
ENSVVUG00000018601	EDC3	100	57.977	ENSHBUG00000020817	EDC3	100	57.977	Haplochromis_burtoni
ENSVVUG00000018601	EDC3	100	67.191	ENSHBUG00000003635	edc3	100	67.191	Haplochromis_burtoni
ENSVVUG00000018601	EDC3	100	67.123	ENSHCOG00000016834	edc3	100	68.297	Hippocampus_comes
ENSVVUG00000018601	EDC3	99	70.059	ENSIPUG00000005695	edc3	100	70.059	Ictalurus_punctatus
ENSVVUG00000018601	EDC3	100	97.047	ENSSTOG00000013936	EDC3	100	97.047	Ictidomys_tridecemlineatus
ENSVVUG00000018601	EDC3	100	95.472	ENSJJAG00000008074	Edc3	100	95.472	Jaculus_jaculus
ENSVVUG00000018601	EDC3	100	55.512	ENSKMAG00000001987	EDC3	100	55.512	Kryptolebias_marmoratus
ENSVVUG00000018601	EDC3	100	68.369	ENSKMAG00000001243	edc3	100	68.369	Kryptolebias_marmoratus
ENSVVUG00000018601	EDC3	100	58.140	ENSLBEG00000017984	EDC3	100	58.140	Labrus_bergylta
ENSVVUG00000018601	EDC3	100	68.824	ENSLBEG00000013435	edc3	99	69.412	Labrus_bergylta
ENSVVUG00000018601	EDC3	100	77.864	ENSLACG00000014149	EDC3	100	77.864	Latimeria_chalumnae
ENSVVUG00000018601	EDC3	99	67.057	ENSLOCG00000014625	edc3	99	67.057	Lepisosteus_oculatus
ENSVVUG00000018601	EDC3	100	95.472	ENSLAFG00000002992	EDC3	100	95.472	Loxodonta_africana
ENSVVUG00000018601	EDC3	100	97.047	ENSMFAG00000043074	EDC3	100	97.047	Macaca_fascicularis
ENSVVUG00000018601	EDC3	100	97.047	ENSMMUG00000011071	EDC3	100	97.047	Macaca_mulatta
ENSVVUG00000018601	EDC3	100	97.047	ENSMNEG00000035316	EDC3	100	97.047	Macaca_nemestrina
ENSVVUG00000018601	EDC3	100	97.244	ENSMLEG00000030372	EDC3	100	97.244	Mandrillus_leucophaeus
ENSVVUG00000018601	EDC3	99	56.055	ENSMAMG00000005423	-	99	56.055	Mastacembelus_armatus
ENSVVUG00000018601	EDC3	100	69.155	ENSMAMG00000000505	edc3	100	69.155	Mastacembelus_armatus
ENSVVUG00000018601	EDC3	100	67.191	ENSMZEG00005004892	edc3	100	67.191	Maylandia_zebra
ENSVVUG00000018601	EDC3	100	58.480	ENSMZEG00005005654	EDC3	100	58.480	Maylandia_zebra
ENSVVUG00000018601	EDC3	100	87.205	ENSMGAG00000002617	EDC3	100	87.205	Meleagris_gallopavo
ENSVVUG00000018601	EDC3	100	96.654	ENSMICG00000043190	EDC3	100	96.654	Microcebus_murinus
ENSVVUG00000018601	EDC3	100	95.866	ENSMOCG00000016205	Edc3	100	95.866	Microtus_ochrogaster
ENSVVUG00000018601	EDC3	99	68.369	ENSMMOG00000012278	edc3	99	68.701	Mola_mola
ENSVVUG00000018601	EDC3	100	92.126	ENSMODG00000009442	EDC3	100	92.126	Monodelphis_domestica
ENSVVUG00000018601	EDC3	100	69.155	ENSMALG00000008658	edc3	100	69.155	Monopterus_albus
ENSVVUG00000018601	EDC3	100	95.276	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSVVUG00000018601	EDC3	100	95.276	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSVVUG00000018601	EDC3	100	95.472	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSVVUG00000018601	EDC3	100	95.079	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSVVUG00000018601	EDC3	100	98.425	ENSMPUG00000017293	EDC3	100	98.425	Mustela_putorius_furo
ENSVVUG00000018601	EDC3	100	96.078	ENSMLUG00000016382	EDC3	100	96.078	Myotis_lucifugus
ENSVVUG00000018601	EDC3	100	95.669	ENSNGAG00000010923	Edc3	100	95.669	Nannospalax_galili
ENSVVUG00000018601	EDC3	100	67.583	ENSNBRG00000002434	edc3	100	67.583	Neolamprologus_brichardi
ENSVVUG00000018601	EDC3	100	58.480	ENSNBRG00000007881	EDC3	100	58.480	Neolamprologus_brichardi
ENSVVUG00000018601	EDC3	100	87.205	ENSNLEG00000014577	EDC3	100	87.205	Nomascus_leucogenys
ENSVVUG00000018601	EDC3	100	90.945	ENSMEUG00000009077	EDC3	100	90.945	Notamacropus_eugenii
ENSVVUG00000018601	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSVVUG00000018601	EDC3	100	60.117	ENSONIG00000002932	-	100	60.117	Oreochromis_niloticus
ENSVVUG00000018601	EDC3	100	67.387	ENSONIG00000008434	edc3	100	67.387	Oreochromis_niloticus
ENSVVUG00000018601	EDC3	78	91.688	ENSOCUG00000017740	EDC3	86	91.688	Oryctolagus_cuniculus
ENSVVUG00000018601	EDC3	100	66.798	ENSORLG00000004883	edc3	100	66.798	Oryzias_latipes
ENSVVUG00000018601	EDC3	100	57.031	ENSORLG00000014399	-	98	57.031	Oryzias_latipes
ENSVVUG00000018601	EDC3	100	57.031	ENSORLG00020019446	-	100	57.031	Oryzias_latipes_hni
ENSVVUG00000018601	EDC3	100	67.191	ENSORLG00020012262	edc3	100	67.191	Oryzias_latipes_hni
ENSVVUG00000018601	EDC3	100	56.641	ENSORLG00015017635	-	96	56.641	Oryzias_latipes_hsok
ENSVVUG00000018601	EDC3	100	66.992	ENSORLG00015005634	edc3	100	66.992	Oryzias_latipes_hsok
ENSVVUG00000018601	EDC3	100	57.031	ENSOMEG00000017354	EDC3	100	57.031	Oryzias_melastigma
ENSVVUG00000018601	EDC3	100	68.431	ENSOMEG00000014026	edc3	100	68.431	Oryzias_melastigma
ENSVVUG00000018601	EDC3	100	96.850	ENSOGAG00000014441	EDC3	100	96.850	Otolemur_garnettii
ENSVVUG00000018601	EDC3	100	96.464	ENSOARG00000003476	EDC3	100	96.464	Ovis_aries
ENSVVUG00000018601	EDC3	100	96.850	ENSPPAG00000040143	EDC3	100	96.850	Pan_paniscus
ENSVVUG00000018601	EDC3	100	98.622	ENSPPRG00000006257	EDC3	100	98.622	Panthera_pardus
ENSVVUG00000018601	EDC3	100	98.622	ENSPTIG00000017424	EDC3	100	98.622	Panthera_tigris_altaica
ENSVVUG00000018601	EDC3	100	96.850	ENSPTRG00000007279	EDC3	100	96.850	Pan_troglodytes
ENSVVUG00000018601	EDC3	100	97.244	ENSPANG00000015997	EDC3	100	97.244	Papio_anubis
ENSVVUG00000018601	EDC3	100	66.406	ENSPKIG00000019810	EDC3	100	66.406	Paramormyrops_kingsleyae
ENSVVUG00000018601	EDC3	100	68.750	ENSPKIG00000004416	edc3	100	69.727	Paramormyrops_kingsleyae
ENSVVUG00000018601	EDC3	100	83.071	ENSPSIG00000008474	EDC3	100	83.268	Pelodiscus_sinensis
ENSVVUG00000018601	EDC3	100	66.536	ENSPMGG00000007223	edc3	100	66.536	Periophthalmus_magnuspinnatus
ENSVVUG00000018601	EDC3	100	95.079	ENSPEMG00000015260	Edc3	100	95.079	Peromyscus_maniculatus_bairdii
ENSVVUG00000018601	EDC3	100	89.961	ENSPCIG00000006276	EDC3	70	90.138	Phascolarctos_cinereus
ENSVVUG00000018601	EDC3	100	68.482	ENSPFOG00000012204	edc3	100	68.482	Poecilia_formosa
ENSVVUG00000018601	EDC3	100	68.482	ENSPLAG00000014420	edc3	100	68.482	Poecilia_latipinna
ENSVVUG00000018601	EDC3	100	68.482	ENSPMEG00000023289	edc3	100	68.482	Poecilia_mexicana
ENSVVUG00000018601	EDC3	100	68.959	ENSPREG00000016022	edc3	100	68.959	Poecilia_reticulata
ENSVVUG00000018601	EDC3	100	95.669	ENSPPYG00000006642	EDC3	100	95.669	Pongo_abelii
ENSVVUG00000018601	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSVVUG00000018601	EDC3	100	96.457	ENSPCOG00000013364	EDC3	100	96.457	Propithecus_coquereli
ENSVVUG00000018601	EDC3	100	95.472	ENSPVAG00000014733	EDC3	100	95.472	Pteropus_vampyrus
ENSVVUG00000018601	EDC3	100	67.191	ENSPNYG00000021797	edc3	100	67.191	Pundamilia_nyererei
ENSVVUG00000018601	EDC3	100	57.977	ENSPNYG00000009669	EDC3	100	57.977	Pundamilia_nyererei
ENSVVUG00000018601	EDC3	100	70.039	ENSPNAG00000019657	edc3	100	70.039	Pygocentrus_nattereri
ENSVVUG00000018601	EDC3	99	95.644	ENSRNOG00000019579	Edc3	99	95.644	Rattus_norvegicus
ENSVVUG00000018601	EDC3	100	96.850	ENSRBIG00000019488	EDC3	100	96.850	Rhinopithecus_bieti
ENSVVUG00000018601	EDC3	100	96.850	ENSRROG00000034959	EDC3	100	96.850	Rhinopithecus_roxellana
ENSVVUG00000018601	EDC3	100	97.047	ENSSBOG00000004896	EDC3	100	97.047	Saimiri_boliviensis_boliviensis
ENSVVUG00000018601	EDC3	96	91.411	ENSSHAG00000015075	EDC3	95	91.411	Sarcophilus_harrisii
ENSVVUG00000018601	EDC3	100	63.619	ENSSFOG00015002439	edc3	100	64.786	Scleropages_formosus
ENSVVUG00000018601	EDC3	100	70.328	ENSSFOG00015016939	edc3	100	71.012	Scleropages_formosus
ENSVVUG00000018601	EDC3	100	68.566	ENSSMAG00000010695	edc3	100	68.762	Scophthalmus_maximus
ENSVVUG00000018601	EDC3	99	56.530	ENSSMAG00000010176	-	99	57.310	Scophthalmus_maximus
ENSVVUG00000018601	EDC3	100	59.345	ENSSDUG00000007671	EDC3	100	59.345	Seriola_dumerili
ENSVVUG00000018601	EDC3	100	68.824	ENSSDUG00000021844	edc3	100	69.412	Seriola_dumerili
ENSVVUG00000018601	EDC3	100	68.824	ENSSLDG00000022046	edc3	100	69.412	Seriola_lalandi_dorsalis
ENSVVUG00000018601	EDC3	81	95.161	ENSSARG00000003907	EDC3	80	95.161	Sorex_araneus
ENSVVUG00000018601	EDC3	100	87.992	ENSSPUG00000008232	EDC3	100	87.992	Sphenodon_punctatus
ENSVVUG00000018601	EDC3	100	69.548	ENSSPAG00000010009	edc3	100	69.548	Stegastes_partitus
ENSVVUG00000018601	EDC3	100	57.198	ENSSPAG00000020327	EDC3	100	57.198	Stegastes_partitus
ENSVVUG00000018601	EDC3	100	97.047	ENSSSCG00000001903	EDC3	100	97.047	Sus_scrofa
ENSVVUG00000018601	EDC3	100	87.795	ENSTGUG00000004007	EDC3	100	87.795	Taeniopygia_guttata
ENSVVUG00000018601	EDC3	100	69.548	ENSTRUG00000017078	edc3	100	69.548	Takifugu_rubripes
ENSVVUG00000018601	EDC3	100	68.102	ENSTNIG00000016047	edc3	100	68.102	Tetraodon_nigroviridis
ENSVVUG00000018601	EDC3	100	96.260	ENSTTRG00000007990	EDC3	100	96.260	Tursiops_truncatus
ENSVVUG00000018601	EDC3	100	98.819	ENSUAMG00000026710	-	100	98.819	Ursus_americanus
ENSVVUG00000018601	EDC3	100	98.819	ENSUMAG00000005006	EDC3	96	98.819	Ursus_maritimus
ENSVVUG00000018601	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSVVUG00000018601	EDC3	68	81.897	ENSXETG00000010622	edc3	99	83.046	Xenopus_tropicalis
ENSVVUG00000018601	EDC3	100	68.566	ENSXMAG00000007377	edc3	100	68.566	Xiphophorus_maculatus