EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSVVUG00000018651 (Gene tree)
Gene ID: -
Gene Symbol: APAF1
Alias: APAF-1|CED4
Full Name: apoptotic peptidase activating factor 1
Gene Type: protein_coding
Species: Vulpes_vulpes
Status: putative
Strand: Minus strand
Length: 78364 bases
Position: chrNBDQ01000096.1:4840191-4918554
Accession: 112930669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSVVUP00000025433	eIF2A	PF08662.11	9.2e-11	1	1
ENSVVUP00000025424	eIF2A	PF08662.11	9.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSVVUT00000033717	APAF1-205	3627	-	ENSVVUP00000025456	1208 (aa)	-	-
ENSVVUT00000033702	APAF1-204	3636	-	ENSVVUP00000025447	1211 (aa)	-	-
ENSVVUT00000033735	APAF1-207	3465	-	ENSVVUP00000025474	1154 (aa)	-	-
ENSVVUT00000033725	APAF1-206	3591	XM_026013027	ENSVVUP00000025464	1196 (aa)	XP_025868812	UPI000DF70F07
ENSVVUT00000033680	APAF1-203	3598	XM_026013028	ENSVVUP00000025433	1194 (aa)	XP_025868813	UPI000DF6BEE6
ENSVVUT00000033663	APAF1-201	5038	-	ENSVVUP00000025417	1250 (aa)	XP_025868810	UPI000DF68671
ENSVVUT00000033671	APAF1-202	4912	-	ENSVVUP00000025424	1208 (aa)	XP_025868811	UPI000DF6E530

Gene Model

Click here to download ENSVVUG00000018651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSVVUG00000018651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSVVUG00000018651	APAF1	50	30.400	ENSVVUG00000001135	-	94	30.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSVVUG00000018651	APAF1	100	94.169	ENSCAFG00020023804	APAF1	100	93.530	Canis_lupus_dingo
ENSVVUG00000018651	APAF1	100	84.000	ENSCGRG00001019923	Apaf1	100	82.400	Cricetulus_griseus_chok1gshd
ENSVVUG00000018651	APAF1	100	88.231	ENSDNOG00000011420	APAF1	100	88.320	Dasypus_novemcinctus
ENSVVUG00000018651	APAF1	100	84.160	ENSJJAG00000014169	Apaf1	100	84.080	Jaculus_jaculus
ENSVVUG00000018651	APAF1	100	68.102	ENSMGAG00000011573	APAF1	99	68.102	Meleagris_gallopavo
ENSVVUG00000018651	APAF1	95	85.580	ENSPCAG00000005560	APAF1	94	85.580	Procavia_capensis
ENSVVUG00000018651	APAF1	99	68.880	ENSTGUG00000008761	APAF1	99	68.880	Taeniopygia_guttata